Nematolebias whitei (Rio pearlfish): 119426042
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Entry
119426042 CDS
T08042
Symbol
gatad2b
Name
(RefSeq) transcriptional repressor p66-beta
KO
K23194
transcriptional repressor p66
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119426042 (gatad2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119426042 (gatad2b)
03036 Chromosome and associated proteins [BR:
nwh03036
]
119426042 (gatad2b)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
119426042 (gatad2b)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
119426042 (gatad2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
LIM
zf_Tbcl_Rhp7
Motif
Other DBs
NCBI-GeneID:
119426042
NCBI-ProteinID:
XP_037549528
LinkDB
All DBs
Position
19:complement(7180092..7222450)
Genome browser
AA seq
550 aa
AA seq
DB search
MERMSDDALRLNLLKRGLESPSEREEALSKRLKMEGHEAMERLKMLALLKRKDLADLAAL
EVPGTLGDGKGPGASSLHHQSLMGAAYEEKLNGSLRLGGHSGHVGQSKNGKENIMDEPVD
MSAGRRCEAERARQTPSPDIIILSDNEASSPRTTPRPDERVQQANLDMFKGKTGEERQQM
IKALREELRLEEARLVLLKKLRQSQMQKENMVQKASQQVAASQRSGSSAMYMNLAHMQAA
AVGAGGVAGGLSGASSVSPSTLSGSAGGAVGSMADQASSQAAAKLALRKQLEKTLLEIPP
PKPPAPLLHFLPSAANSEFIYMVGLEEVVQSVLDSQGKLRGTLSRMEPFFCAQCQTDFTP
HWKQEKSGRILCEQCMTSNQKKALKAEHTNRLKNAFVKALQQEQEIEQRLQQQAALSPSS
APTGSNVSKTDSMIRQHALRQTPQPQASLQRGLSNSARGVLSNFAQASQLSVASSLMGMS
GAKHCGSGGGNRLQHDSRRQIYNIPGLNIAYLNPAAVGAHKTSSLADRQREYLLDMIPPR
SISQSITGQK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatgtccgacgacgcgctgaggctcaatctgctgaagcgagggttagagtcc
cccagtgagcgggaggaggcgctgtccaagcgtctgaagatggagggccacgaggccatg
gagcgcctcaagatgctggcgctgctcaaacgcaaagacttggccgacctggcagccctc
gaggtccccgggacgctgggagatgggaagggccccggagccagctccctccaccaccag
agcctgatgggggccgcctatgaggagaagctgaacggaagtcttcggcttggaggccac
agcggccacgttggacaaagtaagaacgggaaggagaacatcatggacgaaccggtggac
atgagcgccggcagaagatgtgaggctgagcgagccagacaaaccccgtctccagatatc
atcatcctgtcagacaacgaagcatccagccccagaacaacacctcgacccgatgagcgt
gtgcagcaggccaacctggacatgttcaaggggaagacgggcgaggagaggcagcagatg
atcaaagctctgagagaagagctgcgtctggaggaggctcgccttgtgctgctcaagaag
ctccggcagagtcagatgcagaaggagaacatggtgcagaaggccagccagcaggtggca
gcctctcagcgctcaggctccagtgccatgtacatgaacctggcccacatgcaggcggcg
gcagtgggggccggcggggtggcgggcggtctcagcggagcttcgtccgtcagcccgtcc
accttgtcgggctcggccggcggagctgtgggctccatggccgaccaggccagcagccag
gcggctgccaagctggccctgcggaagcagctggagaagaccctcctggagatccctccc
cccaaacccccggctccgctccttcacttcctcccgtctgccgccaacagcgagttcatc
tacatggtggggctggaggaggtggtgcagagtgtgctggacagtcagggtaaactcagg
gggactttgtcccgcatggagcccttcttctgtgcccagtgccaaactgacttcaccccc
cactggaaacaagagaagagtgggcgaatcctctgcgagcagtgcatgacgtccaaccag
aagaaggctctgaaggccgagcacaccaacaggctgaagaacgccttcgtgaaggctctg
cagcaggagcaggagattgaacagaggctgcagcagcaggcagccctctctcccagctca
gccccaaccggctcaaacgtctccaagaccgactccatgatccgacagcacgccctgcgc
cagactccccagcctcaagcttctctccagcgaggtctgtccaactctgcccggggagtc
ctgtccaacttcgcccaggcctcccagctgtctgtggccagcagcctgatggggatgagc
ggtgccaagcactgcggcagcggaggaggcaaccgactgcagcacgacagccgccgtcag
atctacaacatcccagggttaaatattgcctacctgaatcctgcagcggtcggagcccat
aagacctccagcttagcggaccggcagagggagtacctgttggacatgatcccacctcga
tccatatcgcagtccatcactggacagaaatga
DBGET
integrated database retrieval system
