Nematolebias whitei (Rio pearlfish): 119426053
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Entry
119426053 CDS
T08042
Symbol
cnot3b
Name
(RefSeq) CCR4-NOT transcription complex subunit 3b
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119426053 (cnot3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119426053 (cnot3b)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119426053 (cnot3b)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119426053 (cnot3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
119426053
NCBI-ProteinID:
XP_037549539
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All DBs
Position
19:35749342..35788181
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AA seq
910 aa
AA seq
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MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQRE
KEEVGTWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKKFIEKHRYHI
RMLETILRMLDNDSVQVEAIKKIKDDVEYYIDSSQDPDFEENEFLYDDLDLDDIPQSLVA
TSPPGHSHLEDEIFQNSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSP
VKNGNPSSLLSSSSSSSSSVSGLTSSSLVSMATIAVGGSSGSGGNSHHSSISNTLTGSYS
NATQQSPHTSAQQQAKNSASSSAPISNSSASTNSHSASSESSPPNASIQGLLTLNSQPQA
LLGPTSTSNSLGLSLGLSLGKGIMSGSIPTSPMSGSLGLSGMPASLSTMASLLSSSTPTP
YAQAAALGTGSSGLPGSLGGVSTTTTNSGLGAIGSGSITVGGLTSLTGDLLGAASGLGSI
GSGILGLSSAQSGVQGSSLLSQSPVGSLAPGSGIGVIGSSGGSSGSTGSGVVGGSSSLSV
RPLSQQKQNCSTSYSSVVADSTIDSALNSASQSQSSQSSCLTSTANPLKDTGPSLLGSLS
LSSSSPSPAYSEAKTSSLLNGPLSYSPPESIKPQESLSSLKSISDQAALSSGIEGDVASL
HLTPDIFPSSTTAQSGSSSAPQPSLSEVSILPSLGVCPLGPVPLSKDQLFQQAMQEAVWM
HMPHPSDSERIRQYLMRNPCPTPPFHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEGTKA
QYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFE
YRYLEDRDLQ
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaacttcaaggtgaaatagatcgatgtctgaaaaaagtagcggag
ggagtggagcagtttgaagacatttggcaaaagcttcacaatgcagctaacgcaaaccag
aaggagaagtatgaagccgatctcaagaaagagattaaaaagctccagcgtcttcgagac
cagatcaagacgtgggtggcatccaacgagatcaaagacaagaggcagctaatagagaac
cgcaaactcatagaaacgcaaatggagcggttcaagattgtggaaagagaaaccaagacg
aaagcatattcgaaagaaggccttggtcttgctcagaaagtggatccagctcagagggag
aaggaggaagtcggcacgtggctaacgaacacaatagacacgctgaacatgcaggtggac
cagtttgagagcgaagtggagtctctttcggtccagaccaggaaaaagaaaggagacaaa
gagaagcaggatcggatcgaggagctgaaaaagttcatcgagaagcatcggtaccacatc
cgaatgctggagacgatactgaggatgctggacaacgactcggtgcaggttgaagccatc
aaaaagatcaaggatgatgtagagtactacatagactcatcgcaggacccagactttgaa
gagaacgagttcctgtacgacgacctggacctggacgacattcctcagtcgttggtcgcc
acctccccaccgggacactcgcatttggaagatgagatcttccagaactccagcagcaca
cccacctccaccacatcatcctctcccatccccccttcacctgccacttgcactacggaa
aactcagaagacgacaagaagcggggacgttcaacagacagtgaagttagccagtcacct
gtgaagaacgggaatccctcctctttgttgtcttcctcttcctcctcttcttcttccgtc
tcgggactgacctcatcctctctggtctctatggcgaccatcgctgttggaggaagcagc
ggatccgggggcaacagccatcacagcagcatctccaacactttgactggcagctacagt
aacgccacccagcagtcacctcacacgtcggcgcagcagcaggccaaaaactcagcgagc
tcctcggctcctatctccaactctagcgcctctaccaacagccacagcgcctcctcagaa
tcctcgccaccaaatgccagcatacaagggctccttactttgaactcccagccccaggcg
cttttgggtcccacatcgacctctaacagcctcggcctcagtctgggactctctctgggg
aaaggcatcatgtccggttccatccccaccagcccgatgtcggggagcctcggcctgtca
gggatgccggcatctctgagcacgatggcgagccttctgtccagctccaccccaactcct
tacgcccaggcagccgccttaggcacgggcagctcaggcttaccgggctctctcgggggt
gtcagcactacaacaaccaacagcgggttgggcgccatcggcagtggaagcatcacagtc
ggcgggctgacgtctttgacgggagacctgctcggcgcagcttcaggattgggcagcatc
ggctccggcattctgggtttgagttccgcccagtcaggagtgcaggggtcttccctgttg
tcacagagtccagtaggaagtctagctccaggaagtgggatcggcgttatcggaagcagc
ggaggcagctcggggtcaacgggcagcggcgtagtcggaggaagctcatcgctgtcggtc
cgaccgctgagccaacagaagcagaactgcagcactagttacagttctgtggtagcagac
agcacaatagactccgccctcaacagtgccagccaatcacaaagcagccaatcttcatgt
ttgacctccacagccaatccgcttaaggacaccggtcccagtttactgggttctttgagt
ttgtcatccagctccccgtcaccggcctacagcgaggctaaaacatcgagcctgctgaac
ggaccgctgtcctactcaccacccgaaagcatcaagccccaggagtctctgagcagcctc
aagtctatctccgaccaagcagcactcagctcagggattgagggagacgtggcctccctg
caccttactccagacatcttccccagcagcactacggcccagtcaggctcctcatcagca
ccgcagccctcgctgtcagaggtcagcatcctcccatcattgggggtctgtccgctgggg
ccggttcccctttccaaagaccagctcttccaacaggccatgcaggaagcagtgtggatg
cacatgccccacccgtccgactcagagagaatcaggcagtatcttatgaggaacccctgc
cccaccccacctttccaccaccagatgccacctccccactctgacactgtagagttttac
cagaggctttccacagagactctctttttcatcttttactacctggagggcactaaagcc
cagtacctggcagccaaagccctgaaaaaacaatcatggaggttccacacaaaatacatg
atgtggtttcagaggcacgaagagcccaagaccatcaccgacgagtttgagcagggaaca
tacatttactttgactacgagaagtggggccagagaaaaaaggagggcttcacgttcgag
tatcggtacctagaggaccgagacctccagtga
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