Nematolebias whitei (Rio pearlfish): 119426058
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Entry
119426058 CDS
T08042
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119426058 (vps50)
Membrane trafficking [BR:
nwh04131
]
Protein recycling
Others
EARP complex
119426058 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Kgd4-YMR31
Motif
Other DBs
NCBI-GeneID:
119426058
NCBI-ProteinID:
XP_037549545
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All DBs
Position
19:9255965..9410203
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AA seq
719 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMSDLSPVENLRIPSKEELRELRQQSIDPQAEQEIINSIEEI
YFSNDSFDMVRHELEVSKKVADLILEKQPAYVKELERVTALQTNLQLAAVICTNARRQLR
GAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTLQRTDVRLSEMLEEEDYPGAIQLCL
ECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVALSKTCKHFDILHYTKVQRAYSLLG
KTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNADTKFQKMQYKDLCTHITLDSYIPC
LTDLCKALWEVMLSYYRTMQWHEEHDKQETAPTPEDAAAQSDELSVDRSYVKKKLEHGLT
RIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVISRLMQVGEEFCGSKSEVLQESIKRQS
VNYFKNYHRARLEELRMFLENETWELCPVKSNFNIAQLHEFKFMGQCRSPSISPSRQSVS
SSVPPQEELSLFQLFLQDGNPFEVHIDQKEEETEDVLASNGYESDEMEKSVYQDYDSDSD
VPDELKQDYVDEQTGDVPLKGVSKETMRSKKKSDYNLNKANAPILTNTTLNVIRLVGKYM
QMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNDMGISARSFYGKIKESTGVRVIEEI
PASSSDSESNSDEDQEVIFNQHEIETVNEGSSDEEDESCYEEVEEMDHSTKSKLAKEFM
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagataaagtctcttatggcccgtcagggcctgaaaagtcctcaagagagcatg
tcagacctgagtcccgtggagaacctgaggatcccgagcaaggaggagttgcgggagctg
aggcagcagtccatcgacccgcaggcggagcaggagatcatcaacagcatcgaggagatc
tacttctccaacgactccttcgacatggtgcgacatgaactggaggtttccaagaaggtc
gctgatctcattctggagaaacagcctgcttatgtcaaggaactggagagggtgacggcc
ttacagaccaacctgcagctggcagcagtcatttgcactaatgcaaggaggcaactacga
ggcgcaaaggaggggttcacagaggccagcctgggtctgttagccaatcagaggaggcga
caactgctgacaggtctactcaagtccctaaggaccatcaagaccctgcaaagaacagat
gtaagactcagcgagatgcttgaggaggaagactatccaggtgcgattcagctctgtctg
gaatgtcaaaaggcagccagcaccttcaaacactacagctgcatcagtgaactgaattct
aaactacaagacactcttgagcaaatagaggaacagcttgatgtcgccttgtcaaagact
tgtaagcacttcgatattttgcactacaccaaggtacagcgtgcctactcgctcctcggc
aaaacacagactgctatggatcagctgcatatgcacttcacacaggccatccataatacg
gtgtttcaagttgtgctgggatatgtagagctgtgcgccgggaacgccgacaccaagttc
cagaagatgcagtataaagacctctgcacgcatatcacccttgacagctacattccctgc
ctgacggatctctgtaaggctttgtgggaggtgatgctgagctattaccgcaccatgcag
tggcatgaggagcatgacaaacaggagaccgcacccacgcccgaggatgcagcagcacag
tctgatgagttgagtgtggaccgaagctacgtgaagaaaaagcttgagcacggacttaca
cggatttggcaggatgtccagttaaaagtaaaggcgtacattctgggtacggacatgtct
aacttcaaatatgatgatttcatcgtggtactggatgtcatcagcaggttgatgcaggtt
ggtgaggagttctgtggcagtaagtcagaagtcctgcaggagtccatcaaacgccagagt
gttaactactttaagaactatcacagagcacggctggaggagttgaggatgtttctggaa
aatgagacgtgggagctgtgtccagtcaagtctaactttaatatcgcccagctccatgag
ttcaagttcatggggcagtgtcgctctccatccatttcccctagcagacagtctgtgtcc
tcgtccgtcccgccccaggaggagctgtccctattccagctcttccttcaggatggaaac
ccatttgaagtgcatattgatcaaaaggaggaggagaccgaggatgtgctcgcatctaat
ggctatgagtcagatgagatggagaagagtgtgtatcaggactacgacagtgacagtgac
gtccccgatgaactcaagcaagactacgtcgatgagcagacaggtgacgtccctctaaag
ggtgtgtccaaggagactatgagaagcaagaagaagtccgactacaaccttaataaggcc
aatgcaccgatactcaccaacaccaccctcaacgtcatccggcttgtcggaaagtacatg
cagatgatgaacatcctgaagccaattgcctttgacgtcatccactgtgtttcacaactt
ttcgactattacctttatgctgtctacaccttcttcggacgcaacgacatgggcatctcg
gctaggtctttttatgggaaaatcaaggaaagcacaggagtgagagtgatagaagagatc
cctgcaagttcttctgactctgagtcaaacagtgatgaggaccaggaagtaattttcaac
cagcatgagatagagacagtgaatgaaggcagttctgatgaggaggatgaaagttgttat
gaagaggttgaagagatggatcatagtacaaagtccaaactagctaaggaattcatgtga
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