Nematolebias whitei (Rio pearlfish): 119426150
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Entry
119426150 CDS
T08042
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03013
Nucleocytoplasmic transport
nwh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119426150 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119426150 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119426150 (nup153)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119426150 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
119426150
NCBI-ProteinID:
XP_037549641
LinkDB
All DBs
Position
19:complement(25269896..25285784)
Genome browser
AA seq
1493 aa
AA seq
DB search
MAAAGGGKIRSRRYHIASKPYAKSKQQSGLISRVTDTVKSIVPSWLQKYFKNEDAAEGEE
AGQGSDQNCLPPPPPPPNGNEEGPPPLDGRDSPEPSTSNTEPSTSRATLNFQDYALSRPP
LSRSHLHFTSLDASSPSLVASSSLFSQPSTSSAPGPFTTGFSLVKEIKDNLSQHEDDNVS
TTSGFSSRASDKDVPTLKTASLPQLWSPEMDKTISGPQPSQSSLKKPSFNLSVFGNSSNS
SLNSTMLNSSQLGDSPFYPGKTTYGGASAVRSSRNRPGTPYQAPVRRQIKAKPAGAHPCG
VTSATARRILQSLERMSSPLADAKRIPAASSPILSPSVDGTRFDVSDHVPKKKRMDSNLP
PVQKLVIPAAASVPGSRAVSFRPTLTPGGLGRSLDRTTREKTPSRQSPQLPEATPGPSQS
TRSYSDPTYPLSSTPAPSSMSSAGGKMKRDRTTTRPCSKRPENDEVVEVPVLPSISLPIS
TSSLPTFSFSLLPPSTSSTSVNSAPSIPAVTPTKETVTNKVSPKASTPPCVPFTFSSPIV
KATAASPPSYSPSTGFTFSAPVAKLAPSMSNGKLTAPTAAVKPVTSKSTEEFEGPFKPAK
TLKQGSVLDLLKSPGFASSVAQTSSGTSVAPQQKSTQSTAPLFTGTSSSSSLPSSAGFGG
LFKAPAGWSCDVCLVQNKQSDTKCVCCMAPKPSSSPKSTGSKPLPTTSVGVESSTSTTTT
TSVPATGFGPIFSKPTGTWDCDTCLVSNKPDAVKCVACETAKPGTGLKPSLTFPSAFSTV
KTASAPTNPVSTGISGFGDKFKKPEGAWECETCLVENKAEDTKCVACTAAKPGASTTSSA
QVFGLGDKFKKPEGSWECDVCLVQNKAADAQCVACQAAKPGAKVEPKAFGSFASSAGGTT
GTSTFGSSTSTSGGFKFGTSDSTSESGGFKFGTSESSSSSSGGFKFGVPFGSSSSESSSK
DTSASSGFKFGSSSEGFKFGVASNDDKKSEQPAAGSGFKFGVGSGTAFGTGSSSTESNSS
KSGFSFEQSKPAEKTPETTTTSSSSVSFTPLFSSQAKSDDAESLSIATSTNTNPTTTTTS
TKGSVFGRLGEPSLATGTPKVSSTFGSVAAGKEPAASTFTFGKPEEKDAPAAPSSFIFGA
ASKDADGAAAPGGFSFGKPSAPTEQPPAAFIFGKPVDKSETSTSETQKPSFTFGQSASDS
TAAAKPAFNFMVNNPANTTNSTTSSTTTPSLFGTASSSTSTPAPASSAAPSTFVFGQPSV
TTSSDAPAAKTFLFGQNQESQSSAPSSAPLNSVPAPGHPFFFGAAANAAAPAAPSFNFGA
TAPSAASTSAPSAAPSPFVFSSAPSGGFGTNQTPAFGSSFGSPFPATASQAPTFGAKPNA
APIFGQQTNSTPVFGAAVNSAPSGGFQFGGASAFAATNNTNSGVFTFGAGSGASPATAAN
PPMAPQSGAAGGGFNFTQPPTFNIGSAKSFTASPAGPSPIAGRKIKTAVRRRK
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgggtggagggaaaattagaagcaggagatatcatattgcttctaaacct
tacgccaagagtaaacagcagtcgggcctcatcagtcgagtgacagacacggtaaagagc
atcgttccttcttggctgcagaaatactttaagaatgaagatgctgctgaaggagaagag
gcagggcaagggtcagaccagaattgcctgccgccaccacctcctcctcctaatggcaat
gaagagggacctcctccccttgatggacgagattccccagagccaagcaccagtaacaca
gaaccctcaactagtcgtgcgaccctgaactttcaggactatgcgctttctcgccctcca
ctgagtcgctcccacctccactttacctcactggatgcctcctccccaagcttggtagcc
tcaagcagcctcttctcccagccctccacctcctcagcccctggccccttcaccacaggc
ttttctttggtcaaagaaatcaaggacaacctctcccagcacgaagatgataacgtctcc
accacgagtgggttctcctctcgtgcatctgacaaggatgtccccactttaaaaactgca
tcacttccacagctttggtccccagagatggacaaaacaatttctggacctcagccttct
cagtccagtttgaaaaagccctctttcaacttgtcagtctttggaaactcctcgaattca
tcattgaacagcacaatgctgaactcaagccagcttggtgattcacctttctatcctggg
aaaaccacgtatggtggagcatctgcagtcaggagctcccgcaatcgtcctggaacacct
taccaggccccagtaagaagacagatcaaggccaagcctgctggtgctcatccctgtggt
gtgaccagtgccactgccaggcgcatcctgcagtccttagagcgcatgtcaagcccactg
gctgatgcaaagagaatcccagcagcatcttcacccatcttgtcaccttcggtggatggc
acaagatttgatgtttcggatcacgttccaaaaaagaaacggatggactcaaatctccca
cctgtgcagaaacttgtgattccagcagcagcttctgttccaggaagtcgtgctgtgtct
tttaggccgactttgactcctggaggactcggccgaagtctggacaggaccacgagggag
aagacaccatcaagacaatcaccacagttacctgaagcaaccccaggtccatctcaaagc
acaaggagttacagtgaccccacctatcctctgtccagcacccctgcacccagcagcatg
agctctgcagggggcaaaatgaaaagagacaggactacaacacgaccttgctctaaacgc
cctgaaaatgatgaggtggtcgaggttcccgtccttccaagcatttcactccccatcagc
acttcatccttacccacattcagcttctctttgttgccaccttccacctcctccacctct
gttaactccgccccctccatcccagctgttactccaactaaggaaactgtcacaaataag
gtttcaccaaaggcttcgacaccaccctgtgtaccttttacattttcctccccgattgtc
aaagccactgctgccagcccaccgtcttattccccttctactggatttactttcagtgca
cctgtagcaaagttggctccttccatgtccaatggaaagctcaccgcccccacagcagca
gtgaagcctgttacaagcaagagcacagaagaatttgaaggaccttttaaaccagctaag
actttgaagcagggcagtgtgctggatctgctcaaatcacctggttttgcttcttctgtt
gctcagacctcctcaggcaccagcgttgctccgcagcaaaaatcaacacagtccacagcc
cccctctttacaggcacaagctcttcctcctccctcccttcatcagcagggttcggtggt
ttgtttaaagcccctgcaggatggagctgtgacgtttgcttagttcagaacaagcagtca
gacacaaagtgtgtttgttgtatggctccaaagcctagttcctcacctaaatctacagga
agtaaaccgttgcctaccacctctgtgggggtggagagcagcacaagcaccaccaccacc
acctctgtacctgcaactggttttggtccaatattttctaaacccacaggaacctgggac
tgtgacacgtgtctggtttcgaacaagcccgatgccgtaaagtgtgtggcctgtgaaaca
gctaaaccagggacggggctcaaaccctcgcttacatttccctctgccttctcaactgtt
aagactgcatctgcacccacaaaccctgtttccacaggcatcagtgggtttggagataaa
ttcaaaaaacctgagggtgcatgggaatgtgaaacatgcttggtagaaaacaaggcagag
gacactaaatgtgtggcctgcacagctgctaaaccaggagcttccacgaccagcagtgcc
caagtgttcggactgggagacaagttcaagaaacctgaaggctcctgggagtgtgacgtc
tgtctggtccagaataaggctgctgatgctcagtgtgttgcctgtcaggcagcaaaacct
ggagcgaaagttgagcccaaagcttttggttcttttgcctcctctgctggtgggactact
ggaacatctacgtttggttcttctacctctacttctggaggttttaagtttggcacatcg
gacagtacgtctgagtctggaggtttcaagtttggaacttcagagtcatcgtcatcttct
tcaggtggatttaaatttggagtcccgtttggaagctcctcgtcagaatcttcttctaaa
gacacttctgcctcatcagggtttaaatttggcagctcctcggaaggctttaaatttggg
gttgcttctaatgatgacaaaaagtctgagcagcccgcggcaggttctgggtttaaattt
ggagtcggcagtgggacagcctttggaactggatcatctagcaccgaaagcaattcttct
aaaagtggcttctcttttgaacagtcaaaacctgcagaaaaaacaccggaaaccaccaca
acctcatcatcttctgtttctttcacgccacttttttcctcacaagcaaaaagtgacgat
gcagaatcgttaagtatcgccacatcaacaaacaccaacccaaccaccaccacaacctcc
acaaaggggtctgtatttgggagattgggcgagcccagtttggcgactggtacacccaaa
gtgagctctacatttggatctgtagcagcagggaaagagccagctgcttccacgtttacc
tttggaaagccggaggagaaggacgcgcctgcagccccatcgagcttcatctttggtgct
gctagtaaggatgcagatggtgcagctgctccaggaggcttttcttttggcaagcccagt
gctccaacagaacaacctccagcagcttttatttttggcaagcctgtggataagagcgaa
acgtccacttcagagacacaaaagccttcattcacttttggacaaagtgcttcagattct
actgctgctgctaaaccagcatttaatttcatggtaaacaatcctgccaacaccaccaac
tccaccacctcgtcaaccacaactcccagtttgtttggcaccgccagcagcagcacgtcc
acaccagcaccagcttcttctgcagctcccagcacctttgtcttcggtcagccttctgta
accaccagcagcgatgctcccgctgctaaaacgtttttgtttggacagaatcaagaaagc
cagtcctcggctccatcaagtgctcctctgaattcagtcccggctccaggtcatcccttc
ttcttcggagctgctgccaatgcagctgctcccgcggctccctcttttaattttggagct
acagcaccctctgcagcctctacatcagctccgtctgcagctccctccccatttgtgttc
agttcagccccctctggaggtttcgggaccaaccagactcctgcatttggttcctctttt
ggatcccctttcccagccacagcttcccaagcccccacctttggagccaaacccaacgct
gcccccatttttggacaacagacaaactccacacctgtgtttggagcggctgttaattct
gcaccaagtggaggctttcagtttggaggagcgagtgcatttgcagccacaaataacacc
aactcaggtgtttttacatttggagcaggatctggagcctctcctgccactgctgccaac
ccccccatggccccccagtcaggagcagctggtggtggattcaactttactcaaccccca
acatttaacatagggtcagctaaatccttcactgcctctccagctggaccgtcaccaatc
gctggacgtaaaatcaagactgcagttcggcgcagaaagtag
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