Nematolebias whitei (Rio pearlfish): 119426167
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Entry
119426167 CDS
T08042
Name
(RefSeq) chondroitin sulfate proteoglycan 5 isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nwh00535
]
119426167
Proteoglycans [BR:
nwh00535
]
Cell surface proteoglycans
Others
119426167
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Motif
Pfam:
Neural_ProG_Cyt
Cadherin_C_2
OppC_N
EGF
Motif
Other DBs
NCBI-GeneID:
119426167
NCBI-ProteinID:
XP_037549667
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Position
19:22546821..22561135
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AA seq
620 aa
AA seq
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MARAHSRMRSWQVLLTISAVFIPLCVHGRHSLVRRHHHHNHSTVNKEALDTRMVLSDDSA
EREHLIGAGVGAKHPHTRHHHSHKSHYLDLVEQPAAEELTAGGAGPDQPGNPLSDDIIKV
EFHSPAPDVVPADDALDWAKVPKPQKQKGGDPTATWTMAEIYDYLSPDNEFSAVDTTPEP
EPTPSPPADMEDENPLLAGSPSKPENEKPNMDSGSSLPAPPMLGAEREEEFGLGGAVGAD
GCRLGFVLSGPGVCVSECDNEPNFCLNGGMCTVVAGVGAFCRCNVQDYIWNKGLRCEWAV
TEFQVLCVVVAVASFVFLLLFMIVVFFAKSLYRLKSENIRLRKRSKYRPQSTEPQTDGLS
VSTTADGSQPNVRKLCDTPPPAPQTHTHNLAYYDNIICQNDPQKKDNQDKSPQPNEEGSM
NILNSHSPKQENNRPASAVLGHTPNNTGENAEDGVTIGLEVLLPKEAKLHLDTSSPLQYD
VFLYKIANNGDSASHSQAPPPHSSTSHVISKSPKSPKQTKAQPCINCEPESGRHSSPSRH
PHLVHGGYPPTSSSQHKCMSTSASPLLHRGQAPGTEHSGGRRDNQSGRIRPSPSSPHLTQ
PPPSPSGMKNYAVSTHSLPP
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgcgcacagccgcatgcggagctggcaggtgctcctgaccatctcagctgtc
ttcatccctctgtgtgttcacgggaggcattctctagtcaggcggcatcatcaccacaac
cactcaactgtcaacaaagaggccttggacacccggatggttcttagtgatgactcagcg
gagagggagcacctgattggagcaggggttggagccaaacatccacacaccagacaccat
cattctcataaaagccactatcttgatttggtagaacagcctgcggcggaggagctaacc
gctggaggagctgggccagaccaacctgggaaccctttatccgatgacatcatcaaggtg
gagtttcacagtcccgcgccagacgttgtgcccgccgacgatgctttagattgggcaaaa
gtccccaaacctcaaaagcagaaaggcggagatcccactgctacatggacgatggcagag
atttacgactacctgtctcctgacaacgaattctcagcggtagatacaaccccagagccc
gagcccaccccttcacccccagctgacatggaagatgagaatccactcctggctggctcc
ccgtcaaaacccgaaaatgaaaagccaaacatggacagcgggtcatctttaccagctcct
cccatgctaggcgcagagagggaagaggagtttggtttgggtggcgccgtgggtgcagac
ggctgcaggctgggctttgtgctgtctggacctggagtttgtgtttcagagtgtgacaat
gaacccaacttctgcttgaacggagggatgtgcacagtggtggcaggggtgggagccttc
tgcaggtgtaatgtgcaggactacatctggaacaaaggtcttcgctgtgaatgggccgtc
acagagttccaggtgttgtgcgtggtggtggccgtggcctcttttgtgttcctcctgctc
ttcatgatcgtcgtgttctttgccaagagcctgtaccgcctcaagagcgagaacatacgc
cttcgcaagcgcagtaagtaccgcccacagagcaccgagccacagacagacgggctctcg
gtttcaacgacagccgacggctcgcaaccaaatgtaaggaaactgtgcgacacccctccg
cccgctcctcaaactcatactcacaacctggcgtactatgacaacattatctgtcagaat
gatccccagaagaaggacaaccaagacaagtcccctcaacccaacgaagaggggtcaatg
aacatcctcaactcccactccccaaaacaagagaacaaccgccctgcctctgctgtcctc
ggccacacccccaacaacacaggggagaatgcagaggatggagtcactattggtctggag
gtgcttctgcccaaagaggccaaacttcacttggacaccagctcaccacttcagtatgac
gtcttcctctacaagattgccaacaatggagactccgcctctcacagccaagctcctccc
cctcactcatccacctctcatgtcatttcgaagtcacccaagtccccaaagcaaaccaag
gcacaaccatgtattaactgtgaaccagagtctgggaggcactcctcacctagtcgccac
ccccacttagtgcatgggggttatccccccacctcttcctcccagcacaaatgcatgtcc
acctctgcctcccctctgctacacagaggtcaggctcctggcacagagcactctgggggt
cggagagacaaccagagcggacgcattcgcccatctccttcgtcgcctcacctcactcag
cctcctccatcaccatccgggatgaagaattatgcagtcagcacccattctctgccaccc
tga
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