Nematolebias whitei (Rio pearlfish): 119426184
Help
Entry
119426184 CDS
T08042
Name
(RefSeq) POU domain, class 2, transcription factor 1
KO
K09364
POU domain transcription factor, class 2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119426184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119426184
03021 Transcription machinery [BR:
nwh03021
]
119426184
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
119426184
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
119426184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
119426184
NCBI-ProteinID:
XP_037549684
LinkDB
All DBs
Position
19:37830223..37892860
Genome browser
AA seq
737 aa
AA seq
DB search
MFVPLPVPFVFQRTASDFSAWRLKSSLAPRTSPDLRMSKASGEENPGAEYLGDSSDSDRN
SPDDQVQMIKSSYSVSPSAAGSKGKSEESLEMTHSSAPPAPPAPPPQQHHHTQLMLAGSQ
LAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAVHAAHAAAQQQANQQQHQHNPSQT
QHQPNKPEHPVPAPPPQLALTQPIQLTAQDIQQLLQLQQLVLMPGHPLQSPAQFLLSQPA
QSQQPQQGLLSTANLIQLPQQSAGGLLTSPPRMGLQAQREKSSDAGSTGGASVAASVSSG
VVTSVGSSSASSSAMASSLTSGLTPSAQGAHMTEEPSDLEELEQFARTFKQRRIKLGFTQ
GDVGVAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAETMAVDSMLPSPS
SISSPLLGIEGLPGRRRKKRTSIETNVRVVLERNFSSNQKPTSEEILLMAEQLNMEKEVI
RVWFCNRRQKEKRINPSSSSTPPLSSQTSPVVTHKTHCYSPHMISSHGLSQVTTSLSTTG
ASSSPSASCPMTPVSSAAMSSSVTPPLPPQSTASPAPSSLGTPGLNAGNTIMGVNAGMNQ
ALIGSNPLATMQALAASGGQLSISSLDGGPGHMFLGGHRGSAVPPSLRQSLFLNRPGLLP
MVTSSAVTSSAPAMGLVSGSGGCGPRPSFCQSPPTGTSNLMSPTSCPEESASPCSSPASF
CSFSEASPPPLGGAMAE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccccctgccggtccccttcgtctttcagagaacagcgtccgacttcagcgcc
tggagactcaagtcctcgctggctccgcggaccagccccgatctcagaatgtccaaagct
tcaggggaggagaaccctggagctgaatatctgggggacagctcagactctgacagaaac
agccctgatgaccaggtccagatgataaaaagctcctacagcgtgtctccctcagccgcc
ggcagcaagggaaagagcgaggagagtttagagatgacacacagctctgctcctcctgca
cctcctgctcctcccccccagcagcatcaccacacccagctgatgctggcaggcagtcag
ctggcagggctcgccgcgctcctcccggcccagcagcagctgctcctccagcaggctcag
gctcagctgctggcggcggccgttcagcagtcgaacgctgcgcacgccgtgcacgccgcc
cacgccgccgcacagcaacaggccaaccagcagcagcatcaacacaacccatcacagacc
cagcatcagccaaacaaaccggagcatcccgtcccggccccccctccacagctggcgctg
acgcagcccatccagctcacggcgcaggacatccagcagctgctgcagctccagcagctg
gttctgatgccgggtcatcccctccagtccccggcccagttcctcctgtctcagcctgcg
cagtcccagcagcctcagcagggtttgctctcaacagcaaatctgatccagctacctcag
caaagtgcagggggactcctcacctccccacctcgcatgggactccaggcacagagggag
aagagcagcgatgctgggagcactggtggagcttctgtagctgccagcgtgagcagtggc
gtcgtgacctctgttggctccagctctgcgtccagcagtgccatggcgtcctcgttaacc
tccggcctgacccccagcgctcagggcgctcacatgaccgaagagcccagcgacctggag
gagctggagcagtttgcccgaaccttcaaacagcgacgcattaagctgggattcacacag
ggcgatgtgggcgtggccatgggaaaactgtacggcaacgacttcagccagaccaccatc
tcccgcttcgaagcgctcaacctgagctttaagaacatgtgcaagctgaagccgctgctg
gagaagtggctgagtgacgccgaaaccatggcggtggacagcatgctgcccagcccctcc
tccatctcctcccccctgctgggcatcgagggtctccccggccgacgcaggaagaaacgc
acgagcatcgagacgaacgtgcgagtggtgctggagcgcaacttcagctcgaaccagaag
ccaacgtcagaggagatcctgctgatggcggagcagctgaacatggagaaggaggtgatt
cgggtttggttctgtaaccgccggcagaaggagaaacgcatcaacccgtccagcagcagc
acccctcctctgtccagccagacttcgcctgtcgtaacgcacaaaacccactgctacagc
ccccacatgatatcgagccacggtctgtcccaggtcaccaccagcctcagcacaacaggt
gccagttcgtcaccttcagcttcctgccccatgactccagtcagctcggctgccatgtct
tcttctgtgactcctcctcttcctcctcagagcacagccagcccggctccttccagcctc
gggacgcccgggctcaacgccgggaacacaataatgggagtgaacgcagggatgaaccag
gccctcattggcagcaatcctctggctaccatgcaagcgctggcagccagtggcgggcag
ctgtccatctccagcctcgacggggggccgggtcacatgtttctgggtggacacaggggt
tctgctgtccccccctcccttcgccagtccctcttcctcaaccgccccggcctcctcccc
atggtgaccagctccgcagtgacatcatctgcgcccgccatgggattggtcagcggcagc
ggtgggtgtggcccaagaccctccttctgtcagtctccgcccactggcaccagcaacctc
atgagcccaacttcgtgccccgaggagtctgcgtccccttgttcaagtcccgcctctttc
tgttccttcagcgaagcttcgccgccccctctggggggcgccatggctgagtga
DBGET
integrated database retrieval system
