Nematolebias whitei (Rio pearlfish): 119426223
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Entry
119426223 CDS
T08042
Symbol
trpa1b
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1b
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119426223 (trpa1b)
Ion channels [BR:
nwh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119426223 (trpa1b)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Ank_KRIT1
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
119426223
NCBI-ProteinID:
XP_037549697
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Position
20:complement(31318603..31344601)
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AA seq
1118 aa
AA seq
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MNFGRDVARQTSCYTYVIEDEDPALASLNAVKLAEKGDLALLENLVRKSPEVLGEKDECG
ASPLHHAAAGGHVTLIQFISSVVDPQEMNSCDDHGNVPLHWAVDRNKVESCRILLDLGAD
PNILNMALLSPLHLAVSLGHNSLVGLLLSYNSTDCNLQGDLGNTPLILACSINNCEALST
LIKHGAHLCQQNKLGHFAMHAAAFAGAKKAMEVILKAGEEHGHSAVSHINYLDKSNSSPL
HLAVRGGNIESIRLCIATGARIDQQQNDRCTPLHLACTQGAIEVVKLMLSTVDQVDDVIN
LTDGACQTPLHRATVFDHAELAEFLISLGADLNSTDCKGNSPLLLATSCGAWKTVALLLS
KGANVNVKDKCGCNFLHLAILQPKGLKNLPDEVLQHNNVKALLNCEDNEGCTPLHYACRL
GIHDSVKNMLGLSGQVGLACKSKDKKSALHFAAQYGRINTCHRLLETITDSRLLNEGDER
GLTPLHLASKGGHTKVVQLLLRKGALFHSDYKGWTCLHHAASEGYTQTMDILLSANIKLM
DKTDEDGNTALHIAARAGHVAAVRLMLVRGAEFVLNKNETSFLHEALQNGRKDVVNAVID
SDRCDEALRLFASDSDQRCPILDMIEFLPETCKHLLDRCVRESDDDHNSPDYHIEYNFRW
LQAPISSKKLTDTLYKVQPLAAVNAMVQYNRIELLNHPVCKKYLAMKWVAYGSKAHMLNM
FFYLLGLMPLTHLIVTLKPSTNTTETGEPDIIMVPISFRTQSVFLSLCMVMVLVMNIYSI
AKEVVQISQQRWSYFRDYSNQCDWSSAIFALLFIIPLMLNAEGSLHWQAGALAVLNSWIG
FLLYLQRFEGVGIYVVMFGEIMKTLFRIVMLFLYLMLAFSLAFYALMLNHKEFKSVPLSV
IQTFVMMVGELNYQNNFLEAFLNNRLPFSILTYFIFVQFVLLMPILLVNLMIGLAVGDIA
EVQRNASLKRIAMQIDLHTALEDKLPYWLMKRVDKPSVIIYPNRKCSKHFLQQFLSGEEE
KNEVWSRVQSKSQACTLIENELKKQKSRMKEMSSILEKQHNLLKLIIQKMEISSEADEYD
GPVNVRGSLWPSLGQSKIRGRSTSRWVPLIKAIESKRK
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcggcagagatgtggctcgacagaccagttgttacacgtacgtcatagaggat
gaagatccagccctggcaagtctaaatgcagttaagctggcggagaagggtgacctggct
cttctggagaacctggtgaggaagagcccggaggtcctcggtgagaaagacgaatgtgga
gcgagtcccctccatcatgctgccgctgggggccatgtcaccctcattcaatttatcagc
tctgtggtcgacccgcaggagatgaacagctgtgatgatcatggcaacgtgcccctgcac
tgggctgtggataggaacaaggtagaaagctgcaggatccttttggacctgggggccgac
ccaaacatcctcaatatggccctcctgtcccctttgcacctggctgtcagcctcggacac
aacagcctggtgggacttcttctgtcctacaactccaccgactgcaacctacagggagat
cttggaaacaccccactgatcctggcctgctccatcaacaactgcgaggctttgagcaca
ctgattaaacatggagcccacctgtgccagcagaacaagctcggccattttgccatgcac
gccgccgccttcgcaggcgcaaaaaaagcgatggaagtcattctgaaggcaggagaagaa
cacggccactctgcggtgagccacatcaactatttggacaagtccaacagcagccctctc
catctggctgtgcgtggcgggaatatcgagagcatccgcctctgtatcgccaccggagcc
agaatagatcagcaacagaacgatcggtgcacacctcttcatttggcctgcactcaaggc
gccattgaggtggtcaagctgatgctctccactgttgatcaagtagatgacgtcatcaat
ctaactgatggggcttgtcagacccctctacacagggctacagtatttgaccacgcagag
ctggcagagttcctcatttcactgggtgcagaccttaacagcactgattgtaaaggaaac
tctcccttgctgctggcgaccagctgtggagcgtggaaaactgtagctctgctgctgtca
aaaggagccaatgttaatgtgaaagacaaatgtggatgcaacttccttcacctggccatc
ctgcagcccaaaggactgaaaaatctcccagatgaagtactgcagcataacaatgtgaag
gctttgctgaactgtgaggataacgagggctgcaccccgctgcattacgcctgcagactg
ggtatccatgactcggtgaagaacatgctgggcctctcggggcaggttggccttgcttgc
aagtccaaggacaagaagtctgctttgcattttgccgctcagtatgggcgcatcaatacc
tgccacaggttactggagacgatcacagactctcgtctgctaaacgaaggtgatgaacgg
ggcctgacgccgctccatttggcttcgaaaggtggacacaccaaagtggttcagctgctt
ctgcgcaaaggagcgctttttcacagtgattacaaagggtggacatgtcttcaccacgct
gcttctgaaggatacacacagactatggacatcttactgtcagccaatatcaagttaatg
gataaaactgatgaggacgggaacactgcgctccatattgctgcaagagcgggacatgtg
gctgcagtcaggctgatgctggtcagaggggccgagttcgtactgaacaaaaatgagact
tcattcctccatgaagctctgcagaacggaagaaaagacgtggtcaacgctgtgatcgac
agtgacagatgtgacgaggccttgaggctgtttgcttccgactccgatcagcgatgcccc
atactggacatgattgagtttctgccagagacttgcaagcatctgctggaccgatgtgtg
agggagtccgacgatgaccacaacagtccagactaccatattgaatacaacttcaggtgg
ctccaggctcccatttcatcaaagaagctaacagatacgctctataaggttcagcctcta
gctgcagtcaatgcgatggtgcagtacaaccggatcgagctcctcaatcacccagtctgc
aaaaagtatttggctatgaagtgggttgcttatgggagcaaggctcacatgctcaacatg
tttttttacctgttagggttgatgcctctaactcacctgatagtaactctaaaaccttcc
accaacaccacagagacaggagagcctgatattatcatggtgcccatctccttcagaacg
caaagtgtctttttgtccttgtgcatggtgatggtcttggtcatgaacatctattcaata
gcaaaagaagtggtgcagatatcacagcagcgctggagttacttcagggattattccaac
cagtgtgactggtcttcagccatctttgctctgctgttcatcattcccctcatgctcaat
gcagagggctctttgcactggcaagcaggagcactggcagttttaaactcctggatcgga
tttctcctttatctccaaaggtttgaaggcgttggcatctatgttgttatgtttggggag
atcatgaaaacactgtttcgaatcgtgatgctgtttttgtacctgatgctggcgttcagc
ttggccttctatgctctcatgctgaaccataaagagtttaagagcgtgccgctttcggtg
atacaaacctttgtgatgatggtcggggagctgaactaccagaacaacttcctggaagct
ttcctgaacaatcggcttcctttcagcatcctgacatacttcatttttgtgcagtttgtt
ctcctcatgccaatcttgttggtaaatctgatgatcggtttggcagttggagacattgct
gaagtccaaagaaatgcatccctaaagcgaatagccatgcagattgatctccacactgct
ctggaagataagctcccctactggttaatgaaacgagtcgacaaaccttcagtcatcatc
taccccaaccgcaagtgctccaagcacttcctgcaacaattcctctcaggtgaggaggaa
aaaaatgaagtgtggagtcgtgtgcagtccaaatcgcaggcatgcactttaatagagaac
gagcttaagaaacaaaaatccagaatgaaagagatgtcgagcattctggagaaacagcac
aacctcctgaagctcatcatccagaagatggagatctcctccgaggccgacgagtacgac
ggcccggtgaacgtcagaggcagcctgtggcccagtctgggtcagagcaaaatcagaggc
cgcagcacgtctcgctgggtccctcttattaaggccatcgagtccaaacgcaaatga
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