Nematolebias whitei (Rio pearlfish): 119426227
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Entry
119426227 CDS
T08042
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04217
Necroptosis
nwh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
119426227
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119426227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119426227
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
119426227
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
119426227
Multi subunit type E3
LUBAC complex
119426227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_HOIP
E3_UbLigase_RBR
IBR_1
PUB
IBR
Zn_ribbon_RanBP
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
119426227
NCBI-ProteinID:
XP_037549700
LinkDB
All DBs
Position
20:4668197..4698106
Genome browser
AA seq
1090 aa
AA seq
DB search
MSSSPASVQMDEVRQRAQLLLTSSGSAQDVKADVQTMASIALPFSEKYRHLTAEAMLKEN
TAGRSRQEALDSLSKLVKALSILEKYGCNLTSPTRPRYWRSVKHNNPVFRTTVDAIKGGR
TVLYLYGYTNQQIDGLSFPDDVTEPDAKNVAAVTLEVMTLRLEVDMLLKGIHPHPESFKD
IIPFPIQNEADSVVNVPADKGQGEKAHIPPPPPTKPSPMPRTKLPKPSAVPPPVSVCNLC
GGASSFVCPSCDSQHFCDACDDLFHRHPSRANHKRDKMHQPKQETCTICGISAVHSQCPT
CIQKLCLNCDRLFHSHPDRKGHNRTIITPAGTKTPSVCQTSWECSHCTTVNEMRAVLCTT
CERPRLATSAAPDSSVSVPMSPNSDWQCKSCTVVNQGSSILCEVCERPRLATRPPVVASP
GSGSDSAEKWTCQFCTYVNTQPSLVCEVCSLSCKDSSAGSLPQSLQQVSFAAKDQPQAKP
QINVELKRQKTMRDDGLKLIHQIREAEKRGISPEEVYAAICMCGGSNPCDWLTSELPHLL
DEICAMAASVQLTPTVVHGDGANPEQNAAGGGVKLSRAEAKLAWLAAGGDTEKAVRQLLR
DRQAKMKELRSLGFQDLFQCDEALHQSGGEVKGALSLLQRPLMEPFHQHIWIDQPEPPID
PKHVDKQRTCRRLLALYSLPSWGRCELVLSLLQEPDVSCSLEDVVQAVKESHDKDFIRRL
LNNECPCCLSIFPRSKMQSLTSCQCSVCHDCFRDHFTIAIRDKHIRDMVCPVCGEPDIND
PEQLDSYFSTLDIQLRDCLEMDVYDLFHKKLMEHTLMKDPKFLWCYHCTNGFINDGNQLK
VTCLMCRKSFCAQCKKPWEPQHQDVSCEQFQLWKRENDPEYQRQGLAGYLRDNGITCPQC
NFQYALTKGGCMHFSCSQCRYEFCSGCNNPYYKACCKTPRCKYNGLHAHHPRDCLFYLRD
WDADKLQQLLQRNGVDFNTDPSSGAQADACGVMEQKDEGGQQVDSPCGLQTQPGQAGLCN
KHYKEYLVSLINAHTLDPAVLYEPNDLIIVCQRYLGDVQRGDPEDENAFSARLLKKLMEL
PLGEKVPRNK
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagtcctgcatctgtccagatggacgaggtcaggcagagagcccagctgctg
ctcacgtcgtcgggctcagctcaggatgtgaaggctgatgttcagaccatggcctccata
gcgctgcccttttcagagaaatatcgtcacctgaccgcagaggccatgctgaaggagaac
acagcgggtcgcagcagacaagaggctctggattctttaagtaaactggtgaaagccttg
agtatcttggagaagtacggctgcaacctgaccagtcccaccaggcccagatactggagg
agcgtcaagcacaacaaccccgtcttcagaaccaccgtggacgccatcaagggaggtcgc
acagttttgtatctgtacggttacaccaaccagcagatcgacggcctcagctttcccgat
gacgtcaccgagccggatgctaaaaacgtggctgcggtgacgctggaggtgatgacgctg
cgcttagaggtggacatgctgctaaagggcatccatcctcaccccgaatcctttaaagac
atcatcccatttcccatccagaacgaggcagactctgtggtaaatgtgcctgcagacaag
ggtcagggagaaaaagctcacatccctcctcctcctccgactaaaccttctccgatgcca
agaacaaaacttccaaaaccttcagcagtacccccaccagtgagtgtgtgtaacctgtgt
ggtggcgcttcgtcttttgtctgtccatcttgtgacagtcagcatttctgcgacgcatgt
gatgacctctttcatcgccatccgtccagagccaatcacaagagagacaaaatgcaccaa
cccaaacaggagacctgcaccatctgtggcatttctgccgtccactctcagtgccccacc
tgcatccagaagttgtgcttgaactgcgaccggctcttccactctcaccctgaccgtaaa
ggacacaacaggaccattatcacaccagcaggaactaaaacacccagtgtgtgtcagacg
tcgtgggagtgctctcactgcactacagtgaacgagatgcgagccgttctctgcacaacc
tgtgaacgtcctcgactcgccacatctgcagctccagacagctccgtgtcggttcccatg
tcaccaaattcagattggcagtgcaagagctgcacggtggtgaatcagggcagcagcatc
ctctgtgaggtctgtgagcgccctcgcctggccactcgcccacctgtcgtcgcaagtcca
ggatctgggtccgactctgcagaaaagtggacctgccagttctgcacctacgtcaacact
cagccctctctggtgtgtgaggtgtgcagcctgtcctgtaaagactcgtccgcaggttct
ttgcctcagtccctccagcaggtgtcgtttgctgctaaggatcagcctcaagcgaagccc
caaatcaacgtggagctgaagaggcagaagacgatgagggacgacgggctcaagctcatc
caccagataagagaggcagagaagcgaggcatcagtccggaggaggtgtacgcagccatc
tgcatgtgtggtgggagcaacccctgcgactggctgacgtcagagctgcctcacctgctg
gacgagatctgcgccatggctgcctccgtccagctgacaccgaccgtcgtccacggagat
ggagcaaacccagagcagaacgctgcaggaggaggagtgaagctgtccagagccgaggcc
aaactggcctggctggccgcaggaggagacacagaaaaagccgtgagacagctgctgagg
gacagacaggccaagatgaaggagctccgctctctgggcttccaggacctctttcagtgt
gatgaagctctgcaccagagcgggggggaggtgaaaggagctctgtctctgctccagcgc
cctctcatggagccgttccaccagcacatctggatagatcagcccgagccaccgatcgat
cccaaacacgtggacaaacagaggacgtgcagacgactgctggcgttgtacagcctgccc
agctgggggcgctgtgagctcgtcctgtctctgctccaggagccagatgtctcctgctct
ctggaggacgtggtgcaggccgtgaaggagtctcatgacaaggacttcatcagacgtctc
ctgaacaacgagtgtccctgctgtctgagcattttccctcgcagcaagatgcagtctctg
acgtcctgccagtgctcggtctgccacgactgcttcagagaccacttcaccatcgccatc
agagacaaacacatcagagacatggtgtgtcccgtctgcggcgagcccgacatcaacgac
ccagaacagctggacagctacttctccacgctggacatccagctgcgggactgcctggag
atggacgtgtacgacctgtttcacaagaagctgatggagcacacgctcatgaaagacccc
aagttcctttggtgttaccattgcaccaatgggtttatcaacgatgggaaccagctcaag
gtcacctgccttatgtgccgcaagagtttctgcgctcagtgcaagaaaccttgggagcct
cagcaccaggacgtgtcctgtgaacagttccagctgtggaagagggagaacgacccggaa
taccagagacaaggcctggcaggttatctgagggacaacggcatcacgtgccctcagtgt
aacttccagtacgctctgacgaaaggcggctgcatgcacttcagctgctcgcagtgcagg
tacgagttctgcagcggctgcaacaacccgtactacaaggcttgttgtaaaacacctcga
tgcaagtacaacggcctgcatgctcatcacccccgagactgtctcttctacctcagagac
tgggacgcagataagctgcaacaactcctgcagaggaacggtgtggacttcaacacagac
ccttccagtggagcccaagctgatgcatgtggcgtgatggagcagaaagatgaaggcggt
cagcaggtggactctccgtgtggcctccagacgcagccgggacaggccggactctgcaat
aagcactacaaggagtacctggtgagcctcataaacgctcacactctggacccggccgtg
ctttacgaacccaacgacctgatcatagtgtgccagcgatacctgggggacgtgcagaga
ggagacccggaggacgagaacgccttcagcgctcgcttactaaagaaactgatggagtta
cctcttggagaaaaggttccaagaaacaaatag
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