Nematolebias whitei (Rio pearlfish): 119426426
Help
Entry
119426426 CDS
T08042
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119426426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119426426
03036 Chromosome and associated proteins [BR:
nwh03036
]
119426426
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119426426
Coactivators
SAGA/TFTC/STAGA complex
119426426
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
119426426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
119426426
NCBI-ProteinID:
XP_037549919
LinkDB
All DBs
Position
2:26488796..26592152
Genome browser
AA seq
1043 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLTGQSSSAVKTDENGGAGSVAPANHHLGK
PLPAPVSTTTLEQQQQGRRNKPETLQEINSKDASTDKTVTSPSLLGSTAAFGEPPTTSAA
CVNATSSGPRSHGASITTLAASGGSTSASPQDSISTAASRSSTASPTTGETSAEASTPRK
RIATPRRSASARIKSLNGAAVTTRRNSSAAVAENVSSPVGSTPPNSTRLLASSINTSTFT
LSNASLPVGQSAIALDRGTPTIALRRLPSHIVASIAQNGNGTSVSALVVQQGARLGPVTS
SASPEGHSKPATDTGSSTVDDCQSKIVMPSQSSSVSSVINTVSSTSSAATPAPTTTASPS
TTTVSQPLSSAPTTAVCGTGVATSAACVTVQTAPVITTTTTTTISMIRPAAPSPTPAVAT
SVQSQPRPGLATPQRIVAPQLIVRPSQQQTTIQLPPGFTIPPGMVLVRTELGQFVLVPQQ
ALAQVQAQAQAQNNMSPRPMTPATGTSFNVTTPQQCPVTSHTTRQCSLTPAKMAPSPSPT
PSSPALQTSSSSSSSSSCPALRPKGPMAPTVAVTAPQQTPVVMAPQGPAQSTSQPVQPAP
TSVTAAPGASVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNVKALVQDLLDAKIE
PEEFTSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQHSLTQPLQQGVKPAACGTPPA
IVTGPAVRIRHPNSISTTVSATALPAGTLGHTAAMGVKAGGVVGGQIRMPMVITQSIRPQ
GTMGKGAFIQTGKSPMGLPVQISGNQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESA
RILATNSELVGTQIRSCKDEAFLHPGLLHRRILETAKKFGVTEVSMEAVTFLSHATQSRL
RTVVEKVSIIAQQRLDSCKDDEYYEQTADVRSQLRFFEQLERIEKQRKDEQEREILLRAA
KSRSRQEDPEQARLKQKAKEMQQQEEAQMRQRDANLTALAFIGPRKKRKLDSPGSTPSGT
ESEAGSLIWGSHTQSVPPRRRAD
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagatatgctcttttcagaggtggatgaaaaagct
gtcagcgacctcgtaggctcattggagtctcagcttactggacaaagcagctctgcggtt
aaaacggacgaaaacggaggcgctggctctgtggcccctgctaaccatcacttaggaaaa
ccgctaccagctccagtgagcaccacaacactagaacaacaacaacaaggacggcgtaat
aaacccgaaacgctccaagaaataaactctaaagacgctagcacggataaaactgtcacc
tctccctcactactgggctccactgctgcttttggcgagcctcccaccacttcggctgcc
tgcgtgaacgccactagcagcggtcctcgatcacatggagcatccatcacaacactggct
gcatctggcgggtcaacttcggcatccccgcaggacagcatcagcaccgcggcaagccgg
agctccacggctagtccgaccacgggggagacgtcagccgaggcgagcacgccgagaaaa
cgcatcgcgacgccgaggaggagcgcttccgctcggatcaagagtttgaacggcgcagct
gtgacgacgaggaggaacagcagtgcagcggtggcagaaaacgtcagctcccccgtgggt
tcaactccaccaaactccacccgactgctcgcgtcctccatcaacacctccactttcacc
ctgtccaacgcaagcctgcctgtaggtcagtcagccattgctctcgacagggggactccc
accattgctttgcggaggctcccgagtcatattgtagccagtatagcccagaatggcaac
gggaccagtgtttcggccctggtggtccaacagggcgcacgtctgggacctgtcacctca
tcagcttccccggaggggcacagcaaaccagccacggatactgggtcttccactgtagat
gactgtcagtccaaaattgtaatgccaagccagtctagtagtgttagctcagtgataaac
actgtatcctcgacttcctctgctgccacaccagctccaaccactacagcatctccaagc
accaccacagtgagccagcctctgagctctgcacctaccacagctgtgtgcgggacaggg
gtggcaacttctgctgcatgtgtgactgttcaaactgcacctgtcatcactactactact
actactaccatcagtatgatcaggcccgcagctccctctccaacacccgctgtggccaca
tctgtacagtctcaaccccgtcctggacttgcaactcctcaaaggattgtagccccccag
ctgattgtcagaccttcccaacagcagacgaccattcagctgccccctggctttaccatc
ccaccggggatggtgctggtacgtaccgagttgggccagtttgtcttggttcctcagcag
gctttggctcaagttcaagctcaagctcaggcccagaacaacatgagtccgcgacctatg
accccggccaccgggacatcctttaatgtaacaactccacagcagtgtcctgtgacctct
cacaccaccaggcagtgttctttgaccccggccaagatggcaccgtctccctctcccact
ccttccagccctgccctccagacctcttcctcttcttcctcctcctcctcctgtcctgca
cttcgccctaagggccccatggcaccgactgtggcagtgacggctccacagcagacccca
gtggttatggctccccagggccctgcccagtctacctctcagccagtgcagccggcaccg
acgagcgtcacagcggcccctggagcttcagtcgtgtcccaggaaatgcaagagaatgtg
aagaagtgtaagaatttcctcgccacacttatcaaactggcatctcacaactctccctcc
cccgagacgtccaagaacgttaaggctctggttcaagacctgctggatgccaagattgaa
ccggaggagttcaccagtcgcctgcaaactgagctcaaatcgtctccgcaaccatacctg
gtcccatttctcaagaaaagtctcccggctctcaggctgtctttgttgaacagtcagcat
tccctgacccagcccctgcagcagggagtcaaaccagcagcctgcggcactcctcctgcc
atcgtgaccgggccagctgtccgcatacggcaccctaacagtatcagcaccactgtgagt
gccacagcactgcctgctgggacgcttggacatacagctgccatgggtgtcaaggcagga
ggggtcgtcggtggtcaaattcgtatgcccatggtcatcacgcagtcaatcagacctcaa
ggcacaatgggaaagggagccttcatacaaacaggcaaaagtccaatgggtctgcctgtt
cagatatctggaaatcagaaaaacaagctcaacgacccgggaggaggctctttcagagat
gatgacgacatcaatgatgtggcctccatggcaggggtaaatctgaacgaggagagcgca
agaatactcgcaaccaactcggagctagtgggaacacagatccgctcgtgtaaagacgag
gcctttctccatccagggctgctacacagacgaattctggaaactgctaagaagtttgga
gtgacagaagtgtccatggaagctgtgacattcctctcacatgcaacacagtcacgactt
cggactgttgtagaaaaagtttctattattgcacagcaacgactcgactcctgtaaggac
gacgagtattacgagcagactgcagacgttcgttcgcagcttcgcttcttcgagcagctg
gagagaattgagaagcagaggaaggacgagcaggagagggagatccttctgagagcagct
aaaagtcgctcaaggcaagaggacccagagcaagctcggctgaaacagaaagctaaggag
atgcaacagcaagaagaggcacagatgagacaacgagatgccaatctcacagcactagcc
ttcattggacccagaaaaaaacgtaaattggactcaccggggtctacgccatcaggaact
gagtccgaagcaggcagcctgatttggggtagccacactcagtctgtccctcctcggagg
agggcagattga
DBGET
integrated database retrieval system
