Nematolebias whitei (Rio pearlfish): 119426437
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Entry
119426437 CDS
T08042
Symbol
adamtsl7
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119426437 (adamtsl7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119426437 (adamtsl7)
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
119426437 (adamtsl7)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
TSP1_CCN
TSP1_spondin
ADAMTS_CR_3
Motif
Other DBs
NCBI-GeneID:
119426437
NCBI-ProteinID:
XP_037549930
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Position
2:complement(27113800..27147929)
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AA seq
602 aa
AA seq
DB search
MSRIRYHTVMQYVKMLSMEHKRRTAVSGLWVMFLMITLRKYSLCWAFFSNPEVFMLQSLG
CDEYLGSGKVIDKCGVCGGDNSTCRLVSGVFRHSLSKIGYHRIVEIPEGATKINVTEMVK
SRNYLALRSRSGRSIINGNWAIDRPGKYEGGGTMFTYRRPNEISTTAGESFLAEGPTNEV
LDVYMIFQQPNPGVYYEYMLPSENSVVPQQPNHRSEEKPTTGPNEHNQHNNAQQEHSNPA
GGGRYPPRIPDNQVPAVQPPRRERQYNWKLAGATECSATCGKGFRYSVFHCVHRQNHVQV
SDGLCDSSGRPTPQEEACNLQPCPAFWDIGEWSECSKTCGLGMQHRQVLCRQVYANRTLN
VYTSRCRHLEQPETASTCQLKICSEWQIRSEWTACSVPCGLGQRSRDVRCVSNVGDFVPD
DECNMNLRPVDVENCDMGACAKSWFYTNWGTRCSAECGMGVRTRGVLCLTNHISSLPLEG
CGSERPADSQVCNNGPCENHIEWFTGPWSQCSAECGPGSQQRSVVCLMKSDEGITVMPPY
ECSSLNRPLSQQSCNLKACGAKWYHTDWSAVSETTHFSTFSLYVFRMFPTNKNIRYLVEV
EA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggataagataccacacagtgatgcagtatgttaagatgctctctatggagcat
aagagaaggacagcagtctctggtctctgggtgatgttcctcatgatcactctcaggaag
tacagtctctgctgggcctttttcagcaacccagaggtgttcatgctacagagtctcggc
tgtgatgagtatctggggtcagggaaggtgatagacaaatgcggcgtttgtggaggggac
aactcaacctgcaggctcgtctcaggagtcttcagacacagtttgtccaagatcggctac
cacagaatagtggagatcccagagggagccacgaagatcaacgtgacggagatggtgaag
agcagaaactaccttgctttgcgaagccgttctgggagatccattattaatggaaactgg
gccattgaccgaccggggaagtacgagggtggagggaccatgttcacctaccgcagaccc
aatgagatcagtaccacagcaggagaatcatttcttgcagaaggccccaccaatgaagtc
ctggacgtttatatgatcttccagcagccaaatccaggtgtttactacgaatacatgctg
ccctcggagaactctgttgtgcctcagcagccaaaccacagatcagaagaaaaacccacg
actggaccaaatgaacacaaccagcacaataacgcacaacaggaacactcaaatccggca
ggaggggggagatatccccctcgcatccctgacaaccaggtacctgccgtccaaccaccc
agacgtgagcgacagtacaactggaaactggctggtgccacagaatgcagcgccacctgt
ggaaaaggtttcaggtattcagtctttcactgcgtgcaccggcagaaccacgttcaggtg
tcggacggtttgtgtgacagcagcgggcgcccgacgccgcaggaggaggcctgcaacctg
cagccatgcccagcattctgggatatcggagagtggtccgagtgcagcaagacgtgtggc
ctgggcatgcagcaccggcaggtcctgtgccgtcaggtttacgccaaccgcaccctcaac
gtctacacgagccgctgccgacacctggagcaacccgaaacagccagtacctgccagctg
aagatctgcagtgagtggcagatccgctccgagtggaccgcttgctcagtgccatgtggg
ctgggtcagaggtccagagatgttcgctgtgtgagcaacgtgggcgactttgttcctgat
gacgagtgcaacatgaatctacggcccgtcgatgtagaaaactgtgacatgggagcctgc
gctaagagctggttctacacaaactggggcaccaggtgctctgctgaatgtgggatgggc
gtgcgaaccaggggggttctctgcctgaccaaccacatcagcagtcttcctctggaggga
tgcggcagcgagcgacctgcagactctcaggtctgcaacaatggcccctgtgagaatcac
attgaatggttcacaggtccctggagtcagtgctctgcggagtgtggtcctggcagccag
cagaggtcagtggtgtgtttaatgaagtcagatgaaggaatcaccgtcatgccgccgtat
gaatgctcgtctttgaaccgacccctcagtcagcagagctgcaacctgaaggcctgtgga
gccaagtggtaccacactgactggagtgctgtgagtgagacgacacacttttctactttt
agtctttacgtgtttagaatgttcccaacaaataaaaatattagatatttggttgaagtg
gaggcttga
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