Nematolebias whitei (Rio pearlfish): 119426514
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Entry
119426514 CDS
T08042
Symbol
cdh7a
Name
(RefSeq) cadherin-7a isoform X1
KO
K06799
cadherin 7, type 2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119426514 (cdh7a)
Cell adhesion molecules [BR:
nwh04515
]
Cadherins
Major cadherins
119426514 (cdh7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
119426514
NCBI-ProteinID:
XP_037550005
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Position
20:23051675..23257217
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AA seq
802 aa
AA seq
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MGWCCSGICRALAPLVLLFVLRERSCCCCWGLKRSSGDLEKSLHSDPNPWDVLQRHKRSW
VWNQFFVLEEFTGNEPLYVGKLHSDVDKGDGKVKYVLTGEGATSIFTIDENTGDIHATKR
LDREAQAYYTLQAQALDRLTNLPVEPRSEFVVKVQDINDNEPKFLDGPYMAGVPEMSPLG
TTVVQVAATDADDPTYGNSARVVYSVIHGQPYFSVEPKTGVIRTALTNMDRETRDQYVLV
IQAKDMVGQMGGLSGTTSVTVTLTDVNDNPPQFTHKSYQYTVLESLPVQSVVARIKAADA
DIGSNAEMDYRIMDGDGPGMFNITTDENTQEGVIILQKSLDFETKSGFALRIEATNRNID
SNFLSLGPFSDTTSVKVTVEDVNEPPIFSVRLNKMVVSEDARVGTSIGRVSAHDPDTSHS
SIRYSIDRNTDLERFFNVDALSGVISTAKPLDREANSVHNLTVFAIESQDPTQIGKGVAL
ITVLDINDNAPIFAKDYETTLCENAMPGQVLQTISAVDKDEPLSGHRFYFALDAPVASNL
NFTLRDNKDNTASILTKRGGFRRREQAVYQLPVLITDSGSPSLSSTNTLSVRVCECDSNG
EAFSCGAVAYTATGLSTGALLATLGCIITLLVMVLLIVTMRRRRKQPLILEEERDIRENI
VRYDDEGGGEEDTEAFDMVTLRNLNIVRDPNVRRDVTPDTPTYFHYTSASHPPYKSLPDN
VVFREFIWERLKDADVDPTAPPYDSLQTYAFEGSGSVADSLSSLESLSTDSDQNYDYLSN
WGPRFKKLADLYGNSDSGSVFS
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgggttggtgctgctcaggcatatgccgagccctggctcctctggtgctcctgtttgtc
ttgagggagagaagctgctgctgctgctgggggctgaagcgcagctctggggatctggag
aagtccctgcactctgatccgaacccctgggacgtcctgcagaggcacaaacgcagctgg
gtatggaaccagttcttcgtattggaggagttcacgggaaacgaaccgctctacgtcggc
aagctgcactctgatgtggacaaaggagatggcaaggtgaagtatgtattaactggagag
ggcgccacatccatctttaccattgatgaaaacaccggagacattcatgccacgaagcgc
ctggatcgggaggctcaggcttattacaccctccaagctcaagctttagaccgactaacc
aacttaccggtggagccgaggtctgagtttgtggtcaaagtgcaggacatcaatgataat
gaacccaagtttcttgacgggccgtacatggcaggcgtaccagagatgtcacctttagga
accacggtagtgcaagtggcagccacagacgcagatgacccaacatatgggaacagcgcc
cgggtggtctacagtgtcattcacggacagccatacttctcagtagagccaaagacaggt
gtcatcagaacagctttgaccaacatggaccgggagacgagagaccagtatgtgctagtc
attcaggccaaagatatggtgggccaaatgggcggactttccggtaccacctctgtcaca
gtcacgcttactgatgtcaacgataacccaccacaattcacacacaagagctatcagtac
acagtgttggagtcgctgccggtccagtccgtggtggccaggatcaaagcagcagatgct
gacataggctccaatgcagagatggactacagaattatggatggtgatgggcctggcatg
ttcaacataacaacagatgaaaacacgcaagagggggttattatcctgcaaaagtcacta
gatttcgagacaaaaagcggctttgctctgagaattgaagctacgaacaggaatattgac
tccaacttcttgagcttgggcccatttagcgacacaacatcagtcaaggtgacagtggaa
gatgtgaacgagccacccatcttctctgtgcggcttaacaagatggttgtttcagaagat
gccagagtgggtacctcaattggaagagtatctgctcatgacccagatacctcccacagt
tcaatcagatactccattgacaggaacacagacttggagcgtttctttaatgtggacgca
ctgagtggggtcatcagcaccgccaagcctctggaccgggaagccaactctgttcataat
ctcaccgtcttcgctatcgagagccaggatccgactcaaattggtaaaggcgtcgctctg
atcacagtgctggacataaatgacaatgctccgatttttgccaaagactacgaaactacc
ctgtgtgaaaatgccatgcctggacaggtgcttcaaacgatcagtgcggtggataaagat
gaacctttgagcgggcatcgcttttattttgccctggatgcacctgtcgcaagcaacctc
aacttcacactgcgggataacaaagacaacacagcatccatactgacaaagagaggcggc
ttcaggagacgcgagcaggcggtgtatcaactgcctgtgttgattacggacagtggaagt
ccttccctcagcagcacaaacacactgtcagtgcgtgtgtgtgagtgcgactccaacggc
gaggccttttcatgtggagcggtggcctacacggcgactggtctgagcactggtgccctc
ctggctacattgggctgcatcatcacacttctggtgatggttttgctaattgtgacaatg
cgccggagaaggaagcagcccctcattcttgaggaggagagggacatcagagagaacatt
gttcgttacgatgatgagggagggggagaggaggacacagaggccttcgacatggtcacg
ctacgcaacctcaacatcgtcagagaccccaacgtgcgtcgagatgtaacaccagatacg
cccacctacttccattacacctcagcttcccacccgccttacaagtccctgccagataac
gtggtgtttcgggagtttatttgggagcgactgaaggatgctgacgtggacccgacagct
cccccttatgactctctgcagacgtatgcttttgaaggaagtggttccgtggctgattcg
ctaagttcactggagtcattaagtacagactcggatcagaactatgactatctcagcaac
tggggtccacgctttaagaagctggctgatctgtacggcaacagtgacagcggcagcgtc
ttctcatag
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