KEGG   Nematolebias whitei (Rio pearlfish): 119426521
Entry
119426521         CDS       T08042                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
  KO
K12842  U2-associated protein SR140
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119426521
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nwh03041]
    119426521
Spliceosome [BR:nwh03041]
 Complex A
  U2 snRNP components
   U2 related factors
    119426521
 Complex B
    119426521
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 SET_assoc RRM_7 DUF2299
Other DBs
NCBI-GeneID: 119426521
NCBI-ProteinID: XP_037550013
LinkDB
Position
20:complement(27739991..27750713)
AA seq 966 aa
MADRTPGSQKASAKAQLESKLKSFSIGKMAVAKRTLSKKEQDDIKKKEDERAAAEIYEEF
LAAFDGGTEGKVKAFVRGGLANASKDEAAADDKKGKLYKPRSRFETPSKSILPLETPSQF
LPLDKRNTLKKSNDKEKKKSNLELFKEELKQIQEERNERHKMKGRVSRFEPLPGTEGKRS
SDGSSRRNRPSSVLDDSAPGSHDVGDPSTTNLYLGNINPKMNEEMLCQEFGRYGPLASVK
IMWPRTDEERARERNCGFVAFMNRRDAERALNNLNGKMIMNFEMRLGWGKGVPIPPHPIY
IPPSMMEHTLPPPPSGLPFNAQPRERLKNPHAPLLPPPKNKEEFEKNLSQAIVKVVVPTE
RTLRSFIHRMIEFVVREGPMFEAMVMNREINNPMYRFLFDNQSPAHVYYRWKLYTILQGE
TPFKWRTDDFRMFKNGSLWRPPPLNLYVHGSCDDEEGEEEEEANKKGCLKEEERDKLEEM
LRGLTPRRGDIAEAMLFCLNHADAAEEIVECITESLSILKTALPKKIARLYLVSDVLYNS
SAKVSNASYYRKYFETKLSQIFSDLNATYKAIQGHLQSENFKQRVMACFRAWEDWAVYPD
PFLIKLQNIFLGLVNLSSEKEAPCLVAEPEPADDLDGAPLGEYVDGTPLEDVDGVPIDAR
ALDGALIDGAPLDDLDGVPIKQLEDDIDGIPFDQSKEFKVAPSKWEAVDEAELEAQAVTT
SKWEVFEQPEESKLVEDSDEEDRSPRSDDNLSYSNPIRDDPDFKAKLSEMNEEKRSKLRE
IEVKVMKFQDELESGKRPKKPGQSIQEQVEHYRDKLLQKEKEKEKLEREKEREKKEKEKV
EVRLKELKKEKEKDDTPTRKERKRHHSGSPSPTRSNSKRGRSTSPRSERSERSDRSYSKD
TTSRSSHKDSPRSSNKKSSKRSPSSPRTPKRSKRSRSKTPKKSTKKSRSRSKSPHRSHKK
SKKSKH
NT seq 2901 nt   +upstreamnt  +downstreamnt
atggcggatcgaacgcctggctctcaaaaagctagcgcaaaggcgcagcttgagagcaaa
ctcaaatctttcagcattggaaaaatggcagtggctaaaagaaccttaagcaagaaggaa
caggatgacataaagaaaaaggaagatgagcgagcagcagcagagatctacgaagagttt
cttgctgcttttgatggaggcacagagggcaaagtcaaggcctttgtccgtgggggtctt
gcaaatgcttcaaaggacgaagcagctgctgatgacaaaaaaggaaagttatacaagccc
aggtcacgttttgagaccccatcaaaaagcatcctacctttggagactccatctcagttt
ttgcccttagataaaagaaatactttgaagaaaagtaatgacaaagaaaagaagaagagt
aacctggagctctttaaagaagaacttaaacagattcaggaggaaaggaatgaaaggcac
aagatgaaaggacgtgtcagtcgttttgaacctctgcctggcacagagggaaagcgctca
tcggatggttcttcacgaagaaaccgtccgtccagtgttttggacgacagcgccccaggt
tcccatgatgtcggagacccttccaccacaaacttgtatcttggaaacatcaatccaaag
atgaacgaggagatgttgtgtcaagagtttggccgttacggcccccttgccagcgtgaaa
atcatgtggccacgaacagatgaggagcgagctcgggagaggaattgcggctttgttgcc
ttcatgaaccggagagatgctgagcgagcactcaataatctaaacggaaaaatgataatg
aactttgagatgaggctagggtggggcaaaggtgtgcccattccgccacaccccatctat
attcctccttctatgatggagcatactctcccacctcctccctctggcctacccttcaac
gctcagcccagagagaggctaaaaaacccacatgctcccctgcttcctccgccgaagaac
aaggaagagtttgagaagaatctgtcgcaagccatagtcaaagtggttgtcccaacagaa
aggactttgcgctctttcatccaccgtatgatcgaatttgtggtgcgtgaaggcccgatg
tttgaagccatggtcatgaaccgagaaatcaacaatcccatgtacaggtttttatttgac
aaccagagcccggcgcatgtgtattaccgatggaaactttacaccatactacagggtgaa
acaccattcaaatggcgaacagatgactttagaatgtttaaaaatggctccttgtggcgt
ccaccgccccttaacctttacgttcacggttcttgcgatgatgaggaaggggaggaagag
gaggaggccaacaagaaaggctgcttaaaagaagaggagcgagacaaattggaggagatg
cttcgaggtttgactcctcggaggggagatatagcggaggccatgctgttctgtctgaac
cacgctgacgcagctgaggagattgtcgagtgcatcacagagtctctctccatcctgaag
acggctttaccaaaaaagatcgcacggttatatctagtttctgatgtgctttacaactca
tcagccaaagtgtcgaatgcgtcttactacagaaaatattttgagacaaagctcagccag
attttctcagatctcaatgccacatacaaagcaatccagggacatcttcagagtgagaac
tttaagcaaagggtgatggcatgtttccgggcgtgggaggactgggctgtgtaccccgat
cctttcctcatcaagctgcagaacatcttcctgggtcttgttaatctctcttcagaaaag
gaggccccatgtcttgttgcagagccggagccagcagacgacctcgacggggctcctttg
ggtgaatatgtagacggcacgccgctggaggatgtagacggggtgcccattgatgcaagg
gcccttgatggggcactgatcgatggagcccctctggatgacttggatggagttcccatc
aagcagttggaggatgacattgatggaataccttttgatcagtcgaaggagttcaaagta
gctccatcaaaatgggaagcggtggatgaggcagagttggaggctcaagctgtaacaacc
tcgaaatgggaagtatttgagcaaccagaagaatcaaaactggttgaggacagtgatgag
gaggacaggagccctcgctcagatgacaacctgagctactccaaccccatcagagacgat
ccagacttcaaggccaaactatccgaaatgaacgaggaaaaacgcagcaaactccgagag
atcgaggttaaagtcatgaagttccaggatgaactggaatctgggaaaagacccaagaaa
cctggtcagagtattcaggagcaggtggagcactacagagacaaactactacagaaagaa
aaggagaaggaaaaattagaacgggagaaagagagagagaaaaaagaaaaggagaaagtt
gaggtgcggttgaaagagctgaagaaagaaaaggagaaggatgacaccccgacaaggaag
gagaggaagcgacatcacagcgggtctcccagtccgacgaggagcaacagcaaacgaggg
cggtccacgtcccctcgctcagaaaggtcagaacgctctgatcgatcttattctaaagac
acgacttcccgctcatcccataaagactcccctcgatccagcaacaagaaatcatccaag
aggtcaccatcttcacctcgcacacctaaacgatcgaagcggtcacggtccaaaacaccc
aagaaatcaacaaagaagtcccgctccagatcaaagtctcctcacagatctcacaaaaag
tcaaagaagagcaaacactga

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