Nematolebias whitei (Rio pearlfish): 119426549
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Entry
119426549 CDS
T08042
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
KO
K11988
sonic hedgehog
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119426549 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nwh01002
]
119426549 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nwh00536
]
119426549 (shha)
Peptidases and inhibitors [BR:
nwh01002
]
Cysteine peptidases
Family C46: hedgehog family
119426549 (shha)
Glycosaminoglycan binding proteins [BR:
nwh00536
]
Heparan sulfate / Heparin
Morphogens
119426549 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Intein_splicing
Vint
Hom_end_hint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
119426549
NCBI-ProteinID:
XP_037550042
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All DBs
Position
20:27165901..27173121
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AA seq
407 aa
AA seq
DB search
MLLWTKIALAGLICLSLVSFGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEEKTGADRMMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPASSTVSLQDGTKKEVQDLQSGDRVLAADGDGNLLYTDFIM
FIDQDSTTRRVFYVIETEAGQRIALTAAHLIFTGNSTRMAAVFASRVRPGQQVLVPAAGE
ERLVATTVTRIYTQEREGSFAPVTAQGSVVVDQVLASCYAVIEDHQLAHWALAPVRLAHR
VSSMLFSSGPQTSARGDGVHWYSKVLYQLGTWLLDSHSLHPLGMSPS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgctgctttggaccaaaatagctttggctggtctcatctgcttgtccttggtgtccttt
gggatgggatgcggaccgggaagggggtacggcaggagaaggcacccgaagaagctgaca
cctctcgcgtacaagcagttcatccccaacgtggcggagaagaccctcggggcgagcggc
agatacgaaggcaagatcacaagaaactcggagcgatttaaggagctgacgcccaattat
aacacagacatcatcttcaaggatgaggagaagaccggagcggacaggatgatgactcag
agatgcaaagacaagctgaactctctggccatctcggtgatgaaccagtggcccggggtg
aagctccgggtcaccgagggctgggacgaggacggacaccacttcgaggagtccctccac
tacgagggcagggctgtggacatcaccacctctgacagagacaagagcaaatacggaact
ctgtccaggcttgcggtggaggccgggttcgactgggtctactacgagtccaaagcgcac
atccactgctctgtgaaagcagaaaactcagtggcagcaaagtcaggcggctgcttcccg
gcatcctccacggtctccctccaggatggcaccaagaaggaggtgcaggacctccagtcc
ggggaccgggtcttggcggcggacggcgacgggaacctgctctacaccgacttcatcatg
ttcatcgaccaggactcgaccaccaggagggtcttctacgtgatcgagacggaggcgggt
cagcggatcgcgctcaccgccgcgcacctcatcttcaccggcaactccacgcggatggcg
gcggtgtttgccagcagagtgcgccccgggcagcaggtgctcgtgcccgccgccggggag
gagcggctcgtggccacgaccgtgacacggatttacacgcaggagcgcgagggctcgttc
gcgccggtgacggcgcaggggtcggtggtggtggaccaggtcctcgcgtcctgttacgcg
gtgatcgaggaccaccagttggcgcactgggccctggcgcccgtcaggctcgcccaccgg
gtgtcctccatgcttttcagctccgggcctcagacgagcgcgcggggcgacggggtgcac
tggtactccaaagtcctgtaccagctggggacgtggctcctggacagccactctctccat
ccactcgggatgtccccgagctga
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