Nematolebias whitei (Rio pearlfish): 119426568
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Entry
119426568 CDS
T08042
Name
(RefSeq) cadherin-20-like isoform X1
KO
K06807
cadherin 20, type 2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119426568
Cell adhesion molecules [BR:
nwh04515
]
Cadherins
Major cadherins
119426568
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
TAS2R
Motif
Other DBs
NCBI-GeneID:
119426568
NCBI-ProteinID:
XP_037550063
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Position
20:4243791..4287935
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AA seq
796 aa
AA seq
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MGLRLHPPAIANTLLLLSLNMLTLLPHGLMGKPADEEDGRSSALLQRVRRGWVWNQFFVL
EEYTGLDPLYIGKLHSDMDKGDGSIKYILTGEGAGTTFTIDDSTGDIHAIQRLDREVKAQ
YVLRAQARNRLTDRPLEPESEFIVKIQDINDNEPKFLDGPYQASVLEMSRIGMSVIQVTA
TDADDPTYGNSARVLYSILEGQPYFSVDAKTGVIRVSLADMDRETRENYTVVIQAKDMGG
QLGGLAGTTTVNIMLSDVNDNPPMFDQRLYQMSVPESAPVGSVVGRIWAKDRDIGVNAEM
KYSIIDGDGRDTFDISTDPTNLFGIITVKRPLNFENKPSYTLKVEGANTHLDPSYRHRGP
FKDVTIVHVSVEDVDEPPLFDSSSYYVELPEDAEKGTVVRTVSARDPDFANNTVRYSIER
SSDPDKFFYIEITSGSLMTVRSLDREEIGWHNITVLAMEMNNPTLIASVTVAVKVLDVND
NPPSLAHFLETYVCENAKAGQLIQTVTAADPDEPLQGQHFSYSLAPEAANNPNFTLRDNQ
DNTAWILTRRGGWSHQDQTTFYVPIFVSDGEQPVQTSTSTLTVRVCSCDHEGNMMSCNAE
AYSLPASLSKGALIAILACIFVLLVMILLMLSLRTHRKKPYLCDEEDNVHENIVRYDDEG
GGEEDTEAFDIAAMWNPREVHHPLGKLRQDMMPEIESLSRYVPQACVVGGGGDSNVHGYV
LAKLLEADVDPCAPPYDSLQTYAYEGEGSVAESLSSLQSGASNTDHEYDYLNDWGPRFKK
LAEMYGVLETNSSPVW
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggggctccggctgcatcctccagctatcgccaacactttgcttcttctgagcctcaac
atgttgacccttctgcctcacggcctcatgggtaaaccagccgatgaggaagacggcaga
agctcagccctgctgcagagggtgagacgaggctgggtgtggaatcagttctttgtcctg
gaggaatacaccggactggacccgctttacatcggaaagctccactcagacatggacaaa
ggtgacggctccattaagtacatcctgacgggcgagggggcaggcacgaccttcaccata
gatgacagcaccggggacatacacgccatccagagactggaccgggaggtcaaggcgcaa
tacgtcctgcgtgcccaggcccgcaaccgcttgacagacaggcctcttgagcctgaatcc
gagttcatcgttaagatccaggacatcaacgacaacgagccaaagttcctagatggtccc
taccaggcatctgtgctagaaatgtccagaataggaatgtcggtgatccaggtgactgcg
acagatgccgacgacccaacatatggcaacagcgctcgtgtgctctacagcatcctggag
ggtcagccatacttctcagtggacgccaaaactggtgtgatccgtgtgtctttggctgat
atggacagagagaccagggaaaactacaccgtggtcatccaggctaaagacatgggtgga
cagctgggggggctggccggcacgaccactgtcaacatcatgctcagtgacgtcaacgac
aacccaccgatgtttgaccagaggctgtatcagatgagcgtgcctgagtcagctcccgta
ggctccgtggtgggccggatctgggccaaggacagagacatcggggtcaacgctgagatg
aagtacagcatcatagatggagatgggagggacaccttcgacatcagcaccgaccccacc
aacctctttggcatcatcacagtgaaaaggccgttaaactttgagaacaagcctagctac
accctgaaggtggagggagccaacacccacctggacccgagctaccgccaccgcgggccc
tttaaagacgtcaccatcgtccatgtgagtgtggaggacgtggacgagcccccactgttc
gactcgtcatcgtactacgtcgagcttcccgaagacgcggagaaaggaacggtggtgcgg
acggtgtcggcccgggatccagactttgccaacaacactgtgaggtactccatcgagagg
tccagcgacccagacaaattcttttacattgaaatcacttctggctcgctgatgacggtg
cgttcgctggaccgggaggagatcggttggcacaacatcacagtcctggccatggagatg
aataaccccacgctgatcgcgagcgtgactgtggctgtaaaggtcctggacgtgaatgac
aatcctccgtcgctggcacatttcttggagacgtacgtttgtgaaaacgccaaagcagga
cagctgatccagacagtgacagccgctgatccagatgagcctctgcagggacaacacttc
tcctacagcttagctccagaggccgccaacaacccaaacttcactctgagggacaaccaa
gacaacacggcgtggattctgacccgccgtggcggctggtcgcatcaggaccagaccacc
ttctatgtgcctatctttgtctctgacggggagcagccagtccagaccagcaccagcact
ctgaccgttcgcgtttgcagctgcgaccatgaagggaacatgatgtcgtgcaacgccgag
gcctacagcctccctgccagcctcagcaaaggagcactcatcgccatcctggcctgcatc
tttgtcctgctggtgatgattctgctcatgctctccctgcggacgcatcgtaaaaagccc
tacctgtgcgacgaggaggacaacgtgcacgaaaacatcgtgcggtacgacgacgaaggc
ggcggtgaggaggacaccgaggctttcgacatcgccgccatgtggaacccccgcgaggtg
caccacccactgggcaaactgagacaggacatgatgccagagatcgagagtctgtctcgc
tacgtgcctcaggcgtgcgtcgtgggtggtggcggggacagtaacgttcatgggtatgtg
ctggccaagcttctagaggcggacgtggacccgtgcgccccaccttacgactccctgcag
acatatgcgtacgaaggagaaggctcggtggcggagtcgctcagctcgctccaatcaggg
gcttcgaacaccgaccacgagtacgactatttaaatgactgggggccacgttttaaaaaa
cttgcagagatgtacggcgtgcttgagaccaacagttctccggtttggtag
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