Nematolebias whitei (Rio pearlfish): 119426583
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Entry
119426583 CDS
T08042
Symbol
dcaf11
Name
(RefSeq) DDB1- and CUL4-associated factor 11
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119426583 (dcaf11)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119426583 (dcaf11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT140_1st
PROPPIN
Cytochrom_D1
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
119426583
NCBI-ProteinID:
XP_037550076
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All DBs
Position
20:35233189..35240544
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AA seq
539 aa
AA seq
DB search
MGSQSSSGMSCGRGSSSDNPADRSDGSEPNQSSSSSRGRRSADRQQGDRQSASEEDVDLA
EVLAYLLRRGQVRLVHGSETTGLQLVQSYSDSDEDSDGAWDGRLGDRYNPPVDAQPDTNE
VDCSEIRTQILLATASASLRGRHSFTHMLTEREQGRCRGSSFSHGECSRIRTHFLPNYVS
HKDTYLQKAFCGVYSEDGNMFLSACQDQNIRLYDTSWGRFHLRQTVKARDVGWSVLDVCF
TPDARHVLYSSWSDYIHLCSIDGDSENHIALDLNPDERRFCVFSLAASTDGTEILGGAND
GCLYVFDLGENKRTLKIDAHEDDVNAVAFADSSSQLLYSGSDDAVCKVWDRRTLREDRPR
PVGQLAGHRDGITFIHSKGDARYLISNSKDQSIKLWDVRKFSPKEGLAASRLAVTQQNWD
YRWQQVPQRALKKHKLTGDTSVMTYRGHGVLHTLIRCRFSPEFTTGQRFIYSGCSTGKVV
IYDVLTGAVVTRLSGHDACVRDVSWHPYEDKIISSSWDGAVRMWEHRQTHPLEEERERD
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggctctcagtccagttctgggatgtcttgtggaaggggttcttccagtgacaaccca
gcagatcggtctgacggatcagaaccgaaccagagcagcagcagcagtcgaggccgcagg
tcggcagacagacagcagggagaccgacagtcggcttcagaggaggacgtggacctagct
gaagttctggcttacctactgaggaggggccaggttcgactggtccacggcagtgaaact
accgggctgcagctggtccagtcctactccgactctgatgaggacagcgatggagcctgg
gacggtcgactgggcgaccgctacaacccgccagtggacgctcagcccgatacgaacgaa
gtggactgcagcgagatccgaacacagatcctgctggccaccgcctcggcttccctgaga
ggccgccacagcttcacccacatgctcacagagagagaacaaggcagatgtagaggctcg
agtttttcacatggagagtgcagccgtatccgcacacattttctgccaaattacgtgtcc
cacaaagacacatacctgcagaaagccttttgtggagtttacagcgaggacggcaacatg
ttcctgtccgcatgtcaagaccagaacatccggctgtacgacacctcctggggccgcttt
cacctgcggcaaacagtgaaggcccgcgacgtgggctggagcgtgctggacgtctgcttc
acccccgacgctcgccacgtgctctactccagctggtccgactacatccatttgtgcagc
atagatggagacagtgaaaaccacatcgccctggacctcaatccagacgagaggaggttt
tgtgtgttttcgctggctgcatcaacggacggcaccgagattctgggcggagcgaacgat
ggctgcctgtacgtttttgatcttggggagaataaacgaacgctgaagattgatgcccac
gaggacgacgtgaacgccgtggcgttcgccgacagctcgtctcagctgctgtactccggc
agcgacgacgccgtgtgcaaggtgtgggacagacggacgctgcgggaggacagaccgcga
cctgtcggacagctggctggccacagagacggcatcaccttcatccacagcaagggtgac
gctcgttatctaattagcaactcgaaggatcagtccatcaagctctgggacgtcaggaag
ttttcacccaaagagggtctggctgcctcccggctggccgtcacccagcagaactgggat
taccgctggcagcaggttccccagagagccctgaagaagcacaagctgacgggcgacacc
tcggtgatgacgtaccgcggtcacggcgtcctgcacacgctcatccgctgccgcttctct
ccggagttcaccaccggccagaggttcatctattccggctgctccaccggcaaagtcgtc
atttacgacgtgctgaccggcgccgtggtaacaaggctgtcgggccacgacgcgtgtgtg
agggacgtcagctggcacccttatgaggacaagatcatcagcagctcttgggacggagcg
gtgcggatgtgggagcacagacagacccaccctctggaggaggagcgggagagggactga
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