Nematolebias whitei (Rio pearlfish): 119426626
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Entry
119426626 CDS
T08042
Symbol
si:ch211-230g15.5
Name
(RefSeq) polyhomeotic-like protein 3
KO
K11458
polyhomeotic-like protein 3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119426626 (si:ch211-230g15.5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119426626 (si:ch211-230g15.5)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
119426626 (si:ch211-230g15.5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
zf-FCS_1
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
119426626
NCBI-ProteinID:
XP_037550123
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Position
20:32840210..32859401
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AA seq
1064 aa
AA seq
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MMDKELLRQSQSEQTSNGPAPSTPTTPTPPRLIPNPMLLDSPAPTLTPTTSSPPPPLTPA
PSVSANHGGPKAVAAASGALSPHVLVPAPHKPPLTLRTYSRPILPSLKASAPTQTTSSSA
VTAAAAPPSSVAHSNTTVSTKTSTSLTNGNPRPGSTPTPITPFHTPASPPGRQVSAAHPV
GTPGSVQANQSPSPVRLLGKGFKGTGQDQVLLRAQMLILTSAMRPAQPSSSSSSSSAPPS
NPASAQLQSLTLRRPPPGTLTIPPSLRLKPPSSAPPPLSRPNAPAFPPLRPRPQPGITAT
ESLATPTRHLPVPPPTLYSPVRAVPLRPRLHSPNTQRAASPRQSSTLRPASAATPLQAPP
TSRPLTRMKSCPLPQLGSAQLGPLPSPHQFERTPSAARQLQIIALSSGRQPKSVSRPAED
SPPPPLTSSSSAPPHCGPGSPLGQTGPPTQTLTQKGKPKDGSETTRDEGGSGKDVQVDKD
VQRDKIETKRTEAKEEPDREEEEMDVTEEGERRKEEGETPMDQSETLPEQVHHQNQRPDT
IKDSTEESKLNLGPTSSQTPRPAPVQASGPVQTKVPGPALIQTTGPVSVQTLVPGPVPVQ
RPVLEPVQVQTPIPGPVPVQTPVPGPRTVPEVSVQNQKVPEPHRDLQPVSQEDFCENMST
QSDNQSALSSLSSQSPPSSPFVTSSSEPPPPLLPPQTTRPTDLSLLRHEARKVDGTPPES
RPSAETEPLCRSEDESESCGQSLGGPWEMKAWPEGRQVLTHLVEGFVIQEGLEPFPVNRS
SLLVPEQVTRPQEVNGTNGRAAPPATEPVKPTEASTDSEDGGRGDADEPETRPAHKDRAV
LHCQFCGKRGHAHNFMRSKRFCSTSCARGFNVRLTKRLRALSAGSRSERPRPSLNRAESV
PGKPLLLRLPRDLWSAGRRDKEGKERVAAVEQREEEEELEGGGGEEDDDDGEEEEDPAVA
MAARMERRATRRVRRASAPAVTSSAPATPTTTFRPAPSQWSVEEVTAFIHMLPGCGDVAE
AFRLQEIDGQALLLLTEDHLMTSMNIKLGPALKICAHINTLKNP
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgatggacaaggagctcctccgtcagagccaatcagaacagacttccaatggccccgcc
ccttccacgccaacgacccccacccccccgcgtctcatccccaaccccatgctcctggac
tcccccgcccccacgctgacacccaccacctcctcccctccgccccccctcacccctgct
ccctctgtctccgccaaccatggaggaccgaaggccgtggcggcggctagcggcgctctg
tcccctcacgttctggtccctgctcctcacaaacccccactcactctgcggacttactcc
cgccccatcctcccttccctcaaagcctccgcccccacacagaccacctcttcctctgcc
gttacagccgctgccgctccaccctcctctgtggcgcacagcaacaccaccgtctcaacc
aagacctccaccagtctcaccaacgggaaccctcgaccaggctccacccccacccccatc
acgccattccacacgccggccagcccacctggcagacaggtgtcagcagctcacccagtg
ggtacacctggctctgttcaggccaatcagagcccctcacctgtcaggctcctggggaaa
ggtttcaaagggactgggcaggaccaggtgctgctaagagctcagatgctgattcttacg
tctgctatgcgacctgctcagccatcttcttcctcctcttcctcctcagcccctccctct
aaccccgcctccgctcagctccagagtctcaccctgaggcgtcctcccccggggaccctc
accatccccccctccctcaggctgaaacccccctcctccgccccgccacctctctctcgt
cccaacgcccccgccttcccacctctcagacctcgaccgcagcccggcatcacggcgact
gagagtctggccacgcccactcgccaccttcccgtcccacctccgactctgtactctccg
gtccgagccgttcctctgagaccgaggctccactctccaaacactcagcgggcggcgtct
cctcgacagtcctccaccctgcgccccgcctccgctgctacgccccttcaggccccgccc
accagcagacctctaaccaggatgaagagctgtccgttgcctcagctgggttcggctcag
ctcggaccattaccctccccccaccagtttgagcgcacgccgtcggcggcgcggcagctt
cagatcatcgccctgtcgtcgggtcgacagccgaagtccgtctccagacctgctgaagac
tcgccgcctcctcctctgacctcctcgtcctctgctcctcctcactgtggtccaggatct
cctttgggtcaaactggccctccaacacaaactctgacccagaaaggaaaaccaaaggac
ggcagtgagacaaccagagacgaagggggctctggtaaagatgtccaggtggacaaagac
gtccaaagagacaagatagagacaaaacgaactgaggccaaggaggagccggaccgagag
gaggaggagatggatgtgacagaggaaggagagaggaggaaggaggagggagagactccc
atggatcagtccgagaccctccccgagcaggtccaccatcagaaccagagacctgatacc
attaaagactccacagaggaatcaaaactcaacctgggtcccacttcatctcaaactcca
agaccagcaccagtccaggcatcaggaccagtccagacaaaggttccaggaccagcttta
atccagacaacgggaccagtttcagtccagacactggttccaggaccagttccggtccag
agacctgttctagaaccagttcaggtccagacacccattccaggaccagttccagtgcag
acaccagttccaggaccacgaacggttccagaggtttcagtccagaaccagaaggtgccg
gagcctcaccgggacctgcagcccgtgagtcaggaggacttctgtgagaacatgtcgacc
cagtccgataatcagtcagcgttgtccagcctgtcctcccagtcacccccctcctcacca
ttcgtcacctcctcatcagaaccccctccccccctcctaccgcctcagaccacccgcccg
accgacctcagcctgttgcggcacgaggccaggaaagtcgacggaacgccgccggagtcg
aggcccagcgccgagacggagcctctctgccgatcagaggacgagtccgagagctgcggc
caatcgctgggcgggccctgggagatgaaggcgtggcctgaaggacgacaggtgctgact
cacctggtggaagggtttgtcatccaggaggggctggaaccgtttcctgtgaaccgctca
tccctgctggttccggagcaggtgacccgaccgcaggaagtgaacgggaccaacgggaga
gcggcgccgcccgccacagaaccggtgaaaccgaccgaggcgtccacagactcggaggac
ggaggacgaggggacgcggacgaacccgagactagaccagcccacaaggaccgggccgtg
ctgcactgccagttctgcgggaagcgaggccacgcccacaacttcatgaggtccaaacgc
ttctgctccacttcctgcgcccgagggttcaacgtccgcctgacgaagcgcctgcgggct
ctgagcgctggcagccggtccgagaggccccgcccctccctgaaccgggccgagtcggta
ccagggaaacctctgctgctgcgcctgcctcgggatctgtggagtgccgggcgccgtgac
aaggaagggaaggagcgggtggcggcggtggagcagagggaggaggaggaggagctggag
ggaggaggaggtgaggaagacgacgacgatggagaagaagaggaggaccccgccgtcgcc
atggcagccaggatggaacgccgagcgactcgcagggtgaggagggcgtcggcgccggcc
gtcaccagctccgctccggccacgcccacaaccacctttagacccgccccctcgcagtgg
agcgtggaagaggtgaccgccttcatccacatgctgccgggctgcggtgacgtggcagag
gcgttccggctgcaggagatcgacggtcaggctctgctgctcctcaccgaggaccacctg
atgaccagcatgaacatcaaactgggcccggctctgaagatctgcgctcacatcaacacg
ctgaagaacccgtga
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