Nematolebias whitei (Rio pearlfish): 119426647
Help
Entry
119426647 CDS
T08042
Symbol
arfgef1
Name
(RefSeq) LOW QUALITY PROTEIN: brefeldin A-inhibited guanine nucleotide-exchange protein 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119426647 (arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119426647 (arfgef1)
Membrane trafficking [BR:
nwh04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
119426647 (arfgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
119426647
NCBI-ProteinID:
XP_037550150
LinkDB
All DBs
Position
20:complement(30414483..30468302)
Genome browser
AA seq
1919 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKEESKKLSPPSGDGKS
GSSTLPPIKSKTNFIEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSAPDST
APGKKLIDRIIETICACFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQLERDRHRQHSPVTQHAEPESP
QLQTPVHPPAKTSTQQANGPVSPRTPSITFPSTPSTPTTPSTLAPESSSRSVSGEQEEQG
PVYENPDPENGSEFCAVENEQTEADQATAAAAQTSKQHERAGEEEEEVLNYEEKAQEIVQ
SILQEVVNTVAAGQKCLXHPKSASEPAEPQPTEPATEEIQSSLEDEGTVGSDSEHVHANG
IPGTPISAIFTPSLPDDRLSLSSTDTQESGATPGQPPGAKFSHILQKDAFLVFRSLCKLS
MKPLSDGPPDPKSHELRSKVLSLQLLLSILQNAGPIFKTNEMFINAIKQYLCVALSKNGV
SSVPEVFELSLSIFLTLLSHFKTHLKMQIEVFFKEIFLYILETSTSSYDHKWMVIQTLTR
ICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGGHELGTTPQQELTLRKKGLE
CLVSILKCMVEWSKDQYVNPNSQTSLGQEKPSEQESTESKASETINRYGSINSLDSTASS
GIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDLA
QFLHQEERLDSTQVGEFLGDNDRFNKEVMYAYVDQMDFQGKDFVSALRIFLEGFRLPGEA
QKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIK
MNRGINDSKDLPEEYLSAIYDEIAGKKIAMKETKELTMKSNKQSVASEKQRRLLYNVEME
QMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDTDVASLC
LEGIRCAIRIACIFSIQLERDAYVQALARFTLLTASSGISEMKQKNIDTIKTLITVAHTD
GNYLGNSWHEILKCISQLELAQLIGTGVKARYISGTVRGKEGFIASTKEQSSDEYLGLVG
GTVDRKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVDFVRWLCAVSMDELASP
THPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNPNEDVAIFAVDSLRQLS
MKFLEKGELANFRFQKDFLRPFEHIMKKNRSPTIRDMVVRCIAQMVNSQAANIRSGWKNI
FSVFHLAASDQDESIVELAFQTTGHIVTNVFEKHFPATIDSFQDAVKCLSEFACNASFPD
TSMEAIRLIRHCAKYVSERPQAFKDYTSDDMNVAPEDRVWVRGWFPILFELSCIINRCKL
DVRTRGLTVMFEVMKTYGHTFEKHWWQDLFRIVFRIFDNMKLPEQQTEKAEWMTTTCNHA
LYAICDVFTQYFESLNGLLLDDILAQLYWCVQQDNEQLARSGTNCLENVVILNGEKFSLE
TWDKTCNCMLDIFKTTIPHALLTWRPEGEHFTTHSLSDKQLDSISQKSLDIQSRSDDQHS
ISSADRVAVENRRQSQHSSTSGVCEDILRSRNLTKIQEQRLFSALLIKCVVQLELIQTID
NIVFFPATSKKEDAENFAAAQRDAVCATDVQVETQDQGMYRYLTSEQLFKLLDCLLKSHC
FAKAFNSNNEQRTLLWKAGFKGKSKPNLLKQETSSLACGLRILFRMYTDERRRDAWEEVQ
RRLLNVCSEAVAYFLALTSESHREAWTNLLLLFLTKVLKISDERFKAHASRYYPLLCEIM
QFDLIPELRAVLRKFYLRIGIVFHIAQLPEPEPEPGPEQGQVEPETETEVGEEAGEEAQ
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggggaaaaagacgaaaaacatgttcctcacacgagctttggaaaagatcttg
gccgacaaggaggtgaaaaaggctcaccattcccagctgcgcaaagcctgcgaggtggct
ctggaggaaatcaaggaggaatccaaaaaattaagtccacccagtggagatggcaaatct
ggctccagcactttaccgccaatcaaatcgaagacaaacttcattgaagccgacaaatac
ttcttgccttttgagctagcttgtcagtccaaatgtccccgcatcgtcatcacctccctc
gactgtttacagaagctgatagcatatggccacctgacgggcagcgccccggacagcacg
gctccgggcaagaagctcatcgacaggatcatcgagaccatctgtgcttgttttcaagga
cctcagactgatgagggtgtgcagctacagattattaaggctctgctgacggccgtgacc
tcccagcacatagaaatccatgaaggtaccgtgctgcaggccgtccgcacctgctacaac
atctacttggccagcaagaacctcatcaaccagacgacggcgaaggccacgctcacacag
atgctcaacgtcatcttcgctcgcatggagaaccaggcactacaggaagcgaagcagctt
gagagagatcggcaccgccagcactccccagtcacccagcacgctgagccagaatccccg
cagctccagacccctgttcacccgcccgccaagacttcgacccagcaggccaacgggccc
gtcagccctcggaccccgagcatcaccttcccatccactccgtccaccccaaccaccccc
tcgacactggccccggagtccagcagcaggtctgtgtccggggagcaggaggagcagggg
cctgtctacgagaacccggatcctgagaacggttctgagttctgtgcggttgaaaatgag
cagacagaggcggaccaagccaccgcagcagcagcacagacatccaaacagcatgaacga
gcaggtgaggaggaagaggaggtcctaaactatgaagagaaagcccaggaaatagttcag
agtattctgcaggaggtggtcaacacagttgcagcaggccagaaatgtctgtgacatcca
aagtctgctagcgagccggctgagccgcagcccactgagccggcgacggaggaaatccag
agctcgctggaggacgagggcaccgtggggagcgacagtgagcatgtccacgccaacggc
attcccggcacgcccatctccgccatcttcacgccctcattgcctgatgataggctgtct
ctgtcctccactgacactcaggaatcaggagcgacaccgggacagccgccaggcgctaaa
ttctcccacatcctgcagaaagatgctttcctcgtctttcgctcgctctgcaagctgtcg
atgaagccgctttcagacggaccgcctgatccaaagtcccacgagctgcgctcgaaggtg
ctgtcccttcagctcttgctgtcgatcctgcagaacgccgggcccatctttaaaaccaac
gagatgtttataaacgccatcaaacagtacctgtgcgtggctctgtccaagaatggcgtc
tcctccgtgcctgaggtcttcgagctttcactctccatcttcctcacgctgctctcccac
ttcaagacgcacctcaagatgcaaatcgaggtgttcttcaaagagattttcctgtatatt
cttgagacgtccacaagctcctacgaccacaagtggatggtcatacagaccctcaccaga
atatgtgcagatgcccagagtgtggtggacatctatgtgaactatgattgtgacttgaat
gctgctaacatttttgaacgtttagtcaacgacctctcaaagatcgcacagggccgagga
ggccacgagctcggcacaacgcctcaacaggagctgacgctgaggaagaaaggccttgaa
tgtctggtgtccatcctgaaatgtatggtggagtggagcaaagaccagtacgtcaaccca
aactcccagaccagcctcggccaggaaaagccttcagaacaggaaagcacggagtccaag
gcctccgaaaccataaaccgctatgggagcatcaattctttggactccaccgcctcatct
ggaatcggtagctacagcacgcagatgtcaggaactgataaccccgagcagtttgaagtc
ctcaaacagcagaaggagatcatcgaacaggggatcgacctgtttaacaaaaaaccaaag
agaggaatccagtaccttcaagagcaaggtatgctgggtaccaccccggaggacctggct
cagtttttgcaccaggaagagaggctcgattcgactcaggtgggagagtttctcggggat
aatgaccgcttcaacaaagaggtgatgtacgcctacgtggatcagatggacttccagggc
aaagattttgtttctgcactgaggatcttcctggagggctttcggctccccggcgaggca
caaaagatcgaccggctcatggagaaatttgcagccagatacctagaatgcaaccagggc
caaaccctcttcgccagcgctgacactgcatatgttctcgcctactcaatcattatgttg
acaacagaccttcacagtccacaggtaaagaacaaaatgacaaaagagcagtacatcaag
atgaaccgtggcatcaacgacagcaaagacctgccagaggagtatctctcagccatttat
gatgagattgcagggaagaagatcgccatgaaggagactaaagagctgaccatgaagtcc
aacaagcaaagtgtggccagcgagaagcagaggcgtctgctgtacaacgtggagatggag
caaatggccaagacagccaaagctctgatggaggccgtcagccacgtccaggctcctttc
accagcgccacacacctggaacacgtcaggcccatgttcaagctggcgtggacgccattc
ctggctgctttcagcgtgggtctgcaggactgcgacgacaccgacgtggcctcgctgtgt
ctggaaggaatccgctgtgccatcaggatagcgtgcatcttctccatacagttggagagg
gacgcgtacgtgcaggctctggcgaggttcaccctgctgacggcaagctcaggcatctcg
gaaatgaagcagaagaacatcgacaccatcaagaccctcatcactgtggctcacaccgat
ggcaactacctgggcaactcctggcacgagattctgaagtgcatcagtcagttggagctg
gctcagctgattggtacgggggtgaaggcgcgctacatctcagggacggtgaggggcaaa
gagggctttattgcgagcacgaaggagcagagcagcgacgagtacctcggtttagttgga
ggaacggtggaccgtaagcagatcgccagcattcaggagtctattggggagacgagctct
cagagtgtggtggtagctgtggacaggatattcacaggttccaccagactagatggaaat
gcaatagtggattttgtgcgctggctgtgtgccgtgtccatggatgagctggcctcgcct
acacatccacgtatgttcagcctgcagaagatagttgagatctcgtactacaacatgggg
cgcatcaggctgcagtggtccaggatctgggaggtcatcggagaccactttaacaaggtt
ggttgtaatcccaatgaagatgtagcaattttcgccgtggattctctcaggcagctgtcc
atgaagttcttggagaaaggggagctggccaacttcaggttccagaaggactttctgagg
cctttcgagcacatcatgaaaaagaaccggtctcccaccatcagagacatggtggtacgc
tgcatcgcccagatggttaactcccaggcggcaaacatccgctcaggctggaagaacatc
ttctcagtcttccacctggctgcatctgaccaggacgagagcatcgtggagctggccttc
cagaccaccgggcatatcgtcacgaatgtattcgaaaagcactttccggcgacgatcgac
tccttccaggatgccgtcaagtgtctgtcggagttcgcctgcaacgcctcttttccagac
accagcatggaagccatccgcctcatccgccactgcgccaaatacgtctcagagaggcca
caggcctttaaggattataccagtgatgacatgaatgtagcacctgaggaccgtgtttgg
gtgcgaggatggttcccgatcctctttgagctctcctgcatcatcaacaggtgtaaactg
gatgtcaggaccagggggctcacggtgatgttcgaagtgatgaagacctacgggcacacc
tttgagaaacactggtggcaggacctgttcaggattgtcttcaggatctttgacaacatg
aagctgcctgagcaacaaactgagaaagcagagtggatgaccaccacatgcaaccatgca
ctttatgccatctgtgatgtcttcacccaatactttgagtcgctcaatggcctcctgttg
gacgatatcctggctcagctgtactggtgtgtgcagcaagataatgagcagctcgcccgt
tcaggcaccaactgtctagagaacgtggtcatcctgaacggggagaagttctccctcgag
acctgggacaaaacgtgtaactgcatgttggacatcttcaagaccacaatccctcatgcg
ctgctaacatggagaccagagggagagcacttcacaacacatagtctgtctgataaacag
ctggactcaatttcccagaagtccttggacattcagtcccgctctgacgatcagcattcc
atcagcagcgctgacagggtcgctgtggagaaccgtcgtcagagccagcacagctcgacc
tccggcgtctgtgaggacattctgaggagcaggaacctgacaaagatccaggagcagcgc
ttattttcggctctgctgataaagtgcgtcgtgcagctggagctcatccagaccatcgac
aacattgtgttcttccctgccaccagtaagaaagaagatgccgagaacttcgctgctgct
cagcgggatgcagtgtgtgcgacagatgtccaggtggagacccaggaccaggggatgtac
cgctatctgacctcagagcagcttttcaagctgctggactgcctgctgaagtctcattgc
tttgccaaggctttcaactccaacaacgagcaaagaactttactgtggaaagcaggtttc
aaaggaaagtcgaagcccaacctcttgaagcaggagaccagcagtctggcatgtgggctg
cgcattctgttccgtatgtacacggacgagaggcgacgggacgcctgggaggaggtccag
agacgactgctcaatgtgtgcagtgaggctgtagcgtacttcctggctctgacatcagaa
agtcacagagaggcctggaccaacctgttgctcctcttcctcactaaggtgctgaagatc
agcgatgaaaggttcaaggcccatgcatccagatattatcctctcctgtgtgagatcatg
cagttcgacctgatccctgagctccgagccgttctgaggaagttctacctgcggatcggc
atcgtctttcatatcgcacagctgcctgagccagagcctgaaccgggccccgagcagggc
caggttgagccagaaacagagacggaggtgggggaggaggctggtgaggaggcgcagtga
DBGET
integrated database retrieval system
