Nematolebias whitei (Rio pearlfish): 119426649
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Entry
119426649 CDS
T08042
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119426649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119426649
03036 Chromosome and associated proteins [BR:
nwh03036
]
119426649
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119426649
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119426649
PBAF complex
119426649
GBAF(ncBAF) complex
119426649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
119426649
NCBI-ProteinID:
XP_037550152
LinkDB
All DBs
Position
20:complement(24750813..24800553)
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AA seq
489 aa
AA seq
DB search
MERKRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGLPSPVMEPSRKRPAPSQQVQQQQ
QQQQTVQNRARKKPVGFPGANEMPARQMDMREPQSDPTLGSNAKRRKMADKILPQRIREL
VPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQQKRKLRLYISNTFNPARPDADD
SDGSIASWELRVEGKLLDDPGKQKKKFSSFFKSLVIELDKDLYGPDNHLVEWHRTSTTQE
TDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDLRLARLLGIHTQTRSCIIQALWQYVKTN
KLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHVISVDPNDQKK
TACYDIDVEVEDPLKSQMSSFLLSTANQQEIASLDNKIHETIESINQLKIQRDFMLSFSR
DPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRAAFYHEPWSQEAVSRYFYCKIQQRRQEL
EQALAVRNT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaagcgtcctggcatgccatctggagcgaggatgccccaccagggagctccc
atgggcccccccggtccaccgtacggagggagcccggcggtgcggcccggtctgccttcc
ccagtgatggagcccagccgtaagaggcctgccccgtcccagcaggtccagcagcagcag
cagcagcagcagaccgtccagaaccgagccaggaagaagccagtcggattccccggagcc
aatgagatgccggcgaggcagatggacatgagagagccccaatcagatcccacgcttgga
tcaaatgctaagagaaggaaaatggcagacaagattcttccgcaaaggattcgggagctg
gtcccagaatctcaggcctacatggatctgctggcttttgagcgcaaactggaccagacc
atcatgcgcaaacgtgtggacattcaggaagcactgaagaggccaatgaagcagcaaaag
cgtaaattgaggctctatatttcaaacactttcaacccggctcgacctgacgcagatgac
tcagatggcagcattgcatcatgggagctaagagtagaggggaagctgctggatgatccc
gggaagcagaaaaagaagttttcttcattttttaagagcctggtgatcgagctggacaaa
gacctgtacggtcctgacaaccatctggtcgagtggcaccgcacctccaccacccaggag
acggacgggttccaggtgaagcgaccaggagacgtgagcgtgcgctgcactctgctgctg
atgctggactaccagcccccccagttcaaactggacctccgtctggctcgcctgcttggc
attcacactcagactcgctcctgcatcatccaggcgctctggcagtacgtgaagaccaac
aagctgcaggactcccatgacaaggagtacatcaactgtgacaagtacttccaacagatt
tttgactgccctcgcctgaagttctctgagatccctcagcgcctcactaacctcctcctg
ccgcctgaccccatcgtcattaaccacgtcatcagcgtggaccccaacgatcagaagaag
acggcgtgctacgacatcgacgtggaggttgaagaccccctgaagagccagatgagcagc
ttcctcctctccaccgccaaccagcaggaaatcgcctcgctcgacaacaagatccacgag
accatcgagtccatcaaccagctgaagatccagcgggacttcatgctcagcttctccaga
gatcccaaaggctacatccaggactggctcaaatcccagagccgagacctcaagctgatg
acggatgtcgtggggaacccagaggaggagaggagggcagcgttttaccatgaaccctgg
tcccaagaggctgtgagccgttatttctactgcaagatccagcaaaggaggcaggagctg
gaacaggccttagcggtccgcaacacttaa
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