Nematolebias whitei (Rio pearlfish): 119426661
Help
Entry
119426661 CDS
T08042
Symbol
si:ch211-186j3.6
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119426661 (si:ch211-186j3.6)
Cell adhesion molecules [BR:
nwh04515
]
Cadherins
Cadherin related
119426661 (si:ch211-186j3.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
Cadherin_CELSR2_9th
CADH_Y-type_LIR
EGF
Cadherin_pro
Big_9
Cadherin_4
hEGF
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
119426661
NCBI-ProteinID:
XP_037550170
LinkDB
All DBs
Position
2:32213318..32681026
Genome browser
AA seq
2640 aa
AA seq
DB search
MIWVLLSFFMLCVAGNRTADLVPFFHGHVFENSPPGSRVNGLSVPLKRLNPNRPCGTAES
GSAATHFKLLGEGGENFRVFAHHKRGHVLLKTSRVLDREERAEYALGLGLCCGQCAELPS
WDASELVDEVASIKVDVLDTNDHQPTFPSSDVKLSLDDATALRNAVCSFSARDDDSGKNA
ELIYFTEPRNGTFYAVPKTGDILLVDSILGLDEPIKFQVFARDRGWPPRTSQGISVEINP
RQWPVAPSMTPQPGERKLNPQSDAGARRSRSVPESDSPVFISVSEDAGIGSVVMNLNPVR
FQSATFELVEPDTESCPVSVSRDSGDIVILRRLDRETEPLLEITVRVQDKRGPEWYLIRV
ELTVTDVNDNVPEWSMVPSPYLAVVLPDAPAGSVVYRLSAQDGDEGINGEVEYFLSDGGD
GRFEVHRKSGQVQTTGLPLQQDREYLLTVVAADGLSSRSAPAVVSVVAGARPPQFVNASF
TIAIPENTPEGQTFLVTPAVSFQKKPISYSLLINPSSLFSISAETGEISLTRSIDYESDQ
HRYLLLVRASEGQDSMSSAAEVRVVIVDENDCVPEFLQSIYSKDGVPETVTTATSLLQVS
ASDCDSGANAELTYYTMSPDFTISPHGTIFPAGPLDYERPNHLYEFVIMAIDKGEIPRTG
TTTVRIRMANVNDESPEFSQHIYRTFVSEDAGPNTLVATVLAKDPDGDGITYKITTGNEE
GNFVIDSQKGLIRLRSSPPPRLQGVEYVLNVTATDDNASGGPQALSSTAQVIVGVDDVNN
NKPVFEKFLFSDVNDNVPFFTSSIYEASVTEGAESGTLVFQVSANDLDLGPNGEISYSLL
EDRSGDHQYFHIDPELGFIYTQAVFDRETKSSYLLEVQSVDGWESARPGKHGQPNSDTAY
VRVFISDVNDNKPMFGQASYEVDVDEDADVGFAILTVSANDEDEGGNAKLRYQITSGNSG
GVFDVEPEVGTIFIAQPLDYELNKRYKLHVLASDGKWEDYTTVTVNVVNKNDEAPVFTVN
EYYGSVTEELDGSPVFVLQVTASDPDKDADQEALRYSLHGQGAESEFIIDEVTGKIYAQR
TLDREERAVWRFVVLATDEGGEGLTGFTDVIINVWDINDNAPIFPCALSCHGDVAENSVS
GTSVMEMSATDLDDSAVGQNAVLSYRIVGSLDATNVELGGIPTFSEMFTINPTTGTIAVG
IGGLDREQVESYLLVVEARDGGGMTGTATATIQIKDMNDHAPRFIDHSCLARISENAEPN
AEVLELTAEDWDTGENAQLTFSVVAGDQEQKFYMVSLKQEQRGILKLKKRLDYERHSEQR
FNLTLKVEDLDFSNFLHCVVEVEDYNDHPPVFIPHFLALAPLPENVIVGTSVAHLVASDS
DSGQNQDITFGLSKGSDPDGLFTIDQSGVLSVARPLDREKTSQHTLVVIATDHGIPPLTG
SATVQLPLLDVNDNGPEFEAAYSPIVFENAAGPQVVRLNQTSRLLLAMDKDSPENGPPFH
FTLPPEYRYSNDFYLQDNLNGTATLTALRTFDRERQKEFLLPIIMSDSGHPAKTVTSTLT
VTIGDQNDHPHVAGEKHISINSHKGRMPTTVLGKVYAPDPDDWDNKTYIFEGHMPSSFIL
NKRTGFLIIKENTPTGTYQFQVRVSDGIWPDAVSTVTVHVRELREEAIFNSGSLRLADIT
SKEFLELRGKQRSRYELLVDFLSEMLSVPPGDVNIFSLMDVKERMLDVRFAVQGGPSFLQ
PEKMHGYLAAHKQKLQSFLQVTVFQIRIDECHSSECNGAGGCTNVLNVRDTPTVVDCGTM
SLVSVTVDSTAVCSCPGREQSHQSCATYPRNPCFNGGVCVDTQHGYRCQCPAQFEGPECQ
QNKHSFHGNGYAWFPPLMPCFESHVSLEFITDVADGLLLYSGPLAQLQTWDHEDFMALEL
IDGTPTLKINHGSGTLVLQLPGNVNVADRRWHRLDVRSNSKEVRFTLDRCSGAAVMEMEG
LGSWLTTEDHSSCEVTGLTPSTDRHLNMSQVLQLGGVNEDIPYIYPQLQHKHFTGCIRNL
IVDSKLYDLGSPAESQSSSPGCLTTDSSCVNMGYPSCGHRGRCHGEWGSFSCQCVAGYMG
HQCEEEVPEYSFDGHSHARYQLAMPLSARRTWVRVLVRTRKHSSIIFNLVSREQKEYLRL
EIFQGLLCVFYNLGDGDYNLTLPNYRLDNGEWHEVLFDRHDNEMMLRLDGGGGQREVTGS
RGRSREIIIDPSAVMLGNTIPSGINMSFQGCMRDVRLNGRYMPLDSQPRDGVSQVSVQGL
SKGCSSDSCRKNQCSPPFTCVDLWRVHECRCPPGHIIRVNGTRKSCVYTLCATRPCHRGT
CVAQSPSKFTCHCPEGYRGQHCETTLAIYREEVGLSFSSLFAICICFMALLVLLLGIFLY
TRWRSYKGLKEGVYHVSAHHDGWEDIRENVLNYDEEGGGEEDQNAYDMAELQKSLQPSPA
QSVQYCRSRALHHPPPSHHHHLHHGSLAPPSAQTLDPLSRTSSSTTLPPSAASTSSTTTT
SLRRDVPPTRPPAQGQARPPQLARRSLSFSSQDLARYLCEIIRDADQHPDSGPFDSLQVF
STEGGGSPAGSLSSFSSAGLDGGSSGDGGGEARREETLGEWGPRFEKLRALYERAETSDL
NT seq
7923 nt
NT seq
+upstream
nt +downstream
nt
atgatttgggtacttttatcatttttcatgttgtgtgtagctgggaacaggacagcggac
cttgtgccgttctttcatggacatgtttttgagaactcccctcctggctcgcgggtcaac
ggactcagcgtgccgttaaagcggctgaacccgaaccggccgtgcggcaccgcggagagc
ggctcagcggcgacgcacttcaaactcttgggtgaaggcggcgagaatttccgcgtcttt
gcgcaccacaaacgggggcacgttttactgaagacttcccgggttttggaccgggaggag
cgggctgagtacgctctgggtctgggtttgtgctgcggtcagtgcgccgagctcccctcc
tgggacgcatctgaacttgtagacgaggtcgcgtccatcaaggtggacgttctggacacc
aacgaccaccagcccactttccctagttccgacgtgaagctgagtctggatgatgccacc
gcgctccgaaacgcggtgtgctcgttcagcgcgcgggacgatgacagcggtaagaacgca
gagctcatttacttcacagagcccaggaacgggactttctatgcggtgcccaaaacgggg
gacatcctccttgtggactccatcctcggtctggatgaaccgataaagtttcaagttttt
gcgcgggatcgcgggtggcccccgcgcactagccaaggcatctcagtggaaataaacccc
cggcagtggcccgtggctccctcaatgactccccaacccggagagaggaaactaaacccg
caaagtgatgcgggagcgcgaaggtccaggtccgtgccggaatcagacagccccgttttc
atcagcgtgtccgaggacgcggggatcggttcggtggtgatgaacctgaaccctgtcagg
ttccagtcggccacgtttgagctggtggagccggacacggagagctgccccgtgagtgtg
agccgcgacagcggggatatagtcatcctgcggagactggaccgggagaccgaacctctg
ctggagatcaccgtcagggtgcaggataaaagaggtcccgagtggtacttgatcagagtg
gagttgactgtgactgatgtaaatgataatgtcccagaatggagcatggttccttcaccc
tacctggcagtggttctccctgatgctcctgcaggatcagtggtgtacagactcagtgct
caggatggggatgaaggcatcaacggggaagtggagtacttcctgtctgatggtggtgat
ggtcgctttgaagtacacagaaagagtggccaggtccaaacgacaggcctccctctgcaa
caggacagggagtacctgctgacagtggtggctgctgatgggctcagcagtcgtagtgct
cctgctgttgtgtctgtagttgctggagcccggccaccacagtttgttaatgcttccttt
acaatcgccataccagagaacactcctgaaggacaaaccttcttggtgacacctgctgtg
tcttttcaaaagaaaccaatcagctacagcctcctcatcaatcccagcagtctcttctcc
atttcagcagagacaggtgaaatcagcctgacccgctctatcgattacgagagtgaccaa
catcgatacttgctattggtgcgagccagcgagggccaggacagcatgagcagtgcagca
gaggtacgagttgtaattgttgatgaaaacgactgcgttccagagtttctacagtcgatt
tacagcaaggatggcgtaccagagactgttacaaccgcaacctccttgttgcaagtgtca
gccagtgactgtgactcgggagcgaatgcagagctgacctattataccatgagtccagat
ttcaccatttcccctcatggaaccatctttccagcggggcctttggactacgaaagaccc
aaccacctgtatgagtttgtcatcatggccattgacaaaggggagatccctcgcacaggc
acgacaacggtacggattagaatggccaatgtcaatgacgagtcacccgagttctcccaa
cacatataccgaacctttgtttctgaagatgcaggccccaacacactcgttgccactgtg
cttgcaaaggaccctgatggagatgggatcacatataaaattaccacaggaaatgaagaa
ggcaattttgtcattgacagtcaaaaaggtttgatccgtctgcgctccagcccaccacct
cgcctgcagggtgttgaatatgtccttaatgttaccgccactgatgacaacgcctcaggc
ggacctcaggcgttgtcatccacagcccaggtcatagttggtgtggatgatgtgaacaac
aacaagcctgtctttgagaagtttctgttttcagatgttaatgacaatgtcccatttttc
acctcttccatctatgaggcgtcagtgactgaaggagcagaatcaggaactctggttttc
caggtttctgccaatgacctcgacttaggtcctaatggagagatttcttactccttgcta
gaagaccgcagtggagaccatcagtatttccatatcgacccagagctgggattcatctac
actcaggctgtgtttgacagagagaccaaaagctcatacttgttggaagttcagtctgtg
gatggctgggagtcagcacggcctggcaagcatgggcaacccaactctgacacagcatat
gttcgtgtttttatcagcgatgtgaacgataacaagcccatgtttggacaggcatcctat
gaagttgatgtggacgaggacgctgacgtgggctttgctattcttacagtcagtgccaat
gatgaggacgaaggtggaaatgccaagctgcgttaccagatcacctcaggaaattcaggt
ggggtgtttgatgtcgagccagaggtgggcacaattttcattgctcagccactggactat
gaactaaacaaaaggtacaagcttcatgtcctggcttctgatggaaaatgggaagattat
acaacagtgaccgtaaacgtggtgaacaagaatgatgaggcaccagtcttcacagttaat
gagtactacggcagcgtaacagaggagctggatggttcacccgtgtttgtcttgcaggtg
acagcatctgacccagataaggatgctgaccaagaggccctgcgctactccctccatggt
cagggtgcagagagtgaatttataattgatgaggttacgggaaagatttatgcccagcgg
acattggaccgtgaagagcgcgctgtttggcgttttgttgtcctggcaacagatgagggt
ggtgagggtctaacaggcttcacagatgtcatcatcaatgtttgggacattaatgacaat
gcacccatcttcccctgcgctctcagttgccacggagatgtagcagagaactctgtttct
gggacttctgttatggagatgagtgcaaccgatctggatgactcagcagtgggacaaaat
gctgttctgtcttacaggatagtgggtagtttggatgccacgaacgtcgagttaggagga
attcctaccttctcagaaatgttcactatcaaccccaccacaggaactattgctgtaggg
attggtggtctggacagagaacaggttgagtcctacctccttgttgtagaggccagagat
gggggaggaatgacaggaactgcaactgcaaccattcagatcaaggatatgaatgaccat
gctccaagattcattgatcactcctgcctggcacggatctctgagaatgcagaacccaat
gcagaggtcttggaactgactgcagaagattgggacactggagaaaatgcccagctgacc
tttagtgttgtggctggagatcaagaacagaaattttacatggtcagtctcaaacaggaa
cagcggggcatcttgaagctcaagaaacgtttggactatgaaagacacagtgagcagagg
ttcaacctcacacttaaggttgaagacctggacttctcaaactttttgcactgtgtggtt
gaagtggaggactacaatgatcatcctcctgtttttattccacactttctggctcttgcc
ccccttcctgaaaatgtcattgtgggaaccagtgtggctcatctggtggccagtgactca
gactcaggccagaaccaagatatcaccttcggcctgtcaaagggctcagatcctgatggt
ctgttcactattgaccagtctggtgtactttcagtggctcgtccactggatcgagagaaa
acatcccagcataccttagttgtcatagcaactgatcatgggattccacctttaacaggc
agtgccacagttcagctgcctttgttggatgtaaatgacaatggaccagagtttgaggca
gcctactcccccatagtgtttgagaatgcggctggaccacaggtagtaaggttgaaccaa
acatcaaggctgctcctagctatggacaaggactcccctgaaaatgggcctccctttcat
ttcacattacccccggagtatcgctacagcaatgatttctaccttcaggacaacttgaat
ggaacagcaacactaacagctttgaggacatttgaccgtgagcgccagaaagagtttctc
cttcctataattatgagtgacagtggtcatccagccaaaacagtgaccagcaccctaact
gtgaccatcggtgatcagaatgatcatcctcatgtggcaggggaaaagcatatttccatc
aatagccataaaggtcgtatgccaacaacagttcttggaaaagtttatgctccagaccct
gatgattgggacaacaagacctatatttttgagggacatatgccaagttccttcatccta
aacaaaagaacaggcttcctcatcatcaaggagaacaccccaacaggaacttaccagttc
caagtacgagtatctgatggcatttggcccgatgctgtctccactgttactgtacatgta
agggagctgcgagaggaggccatcttcaactctgggtccctccgtctggcagatattacc
tcaaaagagttccttgaattgagagggaagcagcggagccgctacgagctgctggtggac
tttctgtctgagatgctttctgttccaccgggtgacgttaacatcttcagcctaatggat
gtgaaggagcgaatgttggatgttcgatttgctgtgcaaggtggcccctccttcctccaa
ccagagaaaatgcatgggtatttggctgcccacaaacaaaagctccagtcattcctgcaa
gtcactgttttccaaatccgtatagatgagtgccatagttcagagtgcaatggtgcaggt
ggctgcaccaacgttttaaatgtgcgagacacacctacagtggtggattgtggaactatg
agtctagtatctgtgacggtggactccacagctgtgtgctcgtgcccaggtagagagcag
tcccatcagtcctgcgccacatatcccagaaatccatgcttcaatggaggcgtctgtgtg
gacactcaacatggctacaggtgccaatgcccagctcagtttgagggacctgaatgccaa
cagaacaagcacagtttccatggcaatggctatgcctggtttcctcctttgatgccttgc
tttgagagccatgtgtcgctggagttcatcacagacgtggctgatggactgctgctgtac
agcggcccgctcgcccagctgcaaacctgggaccacgaggacttcatggccttagagcta
atagatggaacccccaccttaaaaatcaaccatggctccggcactctggtgcttcagttg
ccagggaacgtcaacgttgcagacaggcgctggcatcgactggatgttcgcagcaacagc
aaggaagtacgttttactttggatcgatgctcgggggctgcagtaatggaaatggaaggt
ctgggcagctggttgaccactgaagaccactcctcctgtgaagtgacaggtcttacacca
agcactgacagacacctgaacatgagtcaagtgctccaacttggtggtgtgaacgaggac
atcccctacatctaccctcagcttcaacacaaacacttcacaggctgcatccgaaacctc
attgtggacagcaagctatatgatttgggctccccggctgagtcccagtccagctctcct
ggctgcctgaccacagacagcagctgtgtcaacatgggctatccgtcctgtggccatcgt
ggtcgatgtcatggtgagtggggctccttcagctgccagtgtgttgccggatacatgggc
caccagtgtgaagaagaggtcccagagtactcctttgatggccacagtcatgctcgttac
cagctggcaatgccactgtctgctcgaagaacatgggtccgagttctggttcggacaaga
aaacacagcagcatcatcttcaatctagtctccagagagcagaaagagtacttacgtctg
gagatctttcagggcctcctttgtgttttctacaaccttggggatggagattacaaccta
acgttacccaactaccgtctggacaatggtgaatggcatgaggtcctctttgatcgccat
gacaacgagatgatgctgaggcttgatggtggtggtggacaacgggaggtgacaggatca
cgaggcagaagtcgagaaatcattattgacccctctgctgtgatgctgggaaacactatt
ccctctggaatcaacatgagcttccaaggctgcatgagggatgttcgcctcaatggtcgt
tacatgccactggacagccagccacgggatggggtttcccaggtcagcgtgcagggactc
tccaaaggttgctcctctgactcctgcagaaagaaccaatgtagcccccccttcacctgc
gttgacctgtggagagtgcatgaatgcaggtgtccacctggtcacataatccgtgtgaat
gggaccagaaagtcctgtgtttataccttgtgtgctacacggccttgtcaccgtgggacc
tgtgtcgcccagtcaccctccaaattcacctgccactgccctgagggttacagaggacag
cactgtgagacaaccctggcaatttacagggaggaggtgggcctgagcttcagctccctc
tttgccatctgcatctgcttcatggcattattggtgttgctgctgggcattttcctctac
actcgctggaggtcctacaaagggctgaaggagggcgtgtaccacgtgtctgcgcatcac
gacgggtgggaggacatccgagagaacgtgctcaactacgacgaggagggaggcggggag
gaggaccagaacgcctacgacatggcagagctgcagaagtccctccagccgagcccggcc
cagtcggtccagtactgccgctccagagccctgcaccacccaccaccttcccaccaccac
cacctccaccatgggtccctggccccaccctctgctcagactctggacccgctcagtcgt
acatccagctcaacgacgctgcccccctctgccgcctccacgtcttccaccacaacgacc
agtctccgcagggacgtgccccccaccaggcctccagcccaaggccaggcgcgcccccct
cagctagcacggcgctccctgtcattttccagccaggatctggctcgctacctgtgtgag
atcatccgggatgctgaccagcacccagattctgggccttttgactcgctgcaggtgttc
tccaccgagggagggggctcacctgctggctccctcagctccttcagctcggcaggactg
gatggagggagctcaggggacgggggaggggaggcgaggagagaggagacacttggagag
tgggggcctcgctttgagaagctgcgggcgctgtatgagcgagccgagaccagcgacctc
tga
DBGET
integrated database retrieval system