Nematolebias whitei (Rio pearlfish): 119426698
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Entry
119426698 CDS
T08042
Symbol
myom1b
Name
(RefSeq) M-protein, striated muscle
KO
K24495
myomesin
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119426698 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119426698 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119426698 (myom1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
Ig_J_second
C2-set_3
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
119426698
NCBI-ProteinID:
XP_037550207
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All DBs
Position
20:25567134..25599038
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AA seq
1438 aa
AA seq
DB search
MRLYQSSSRFAGSTSSSTSRSRGLNVSAHLGLEGSRESPLLKRAKPSYLAVDKENQIIGY
VVPIFRGSQEFATGLSDTEEARVRGTAAYMARRNLFTSGLEMERSEVISRKEAMRESAER
ISMSKRIHEHEEHFKRMNEDSLMHPPEFVIKPRSHTVWEKQCVRLHCTVSGWPDPRVIWY
KNNVAIDPLAHPGKFKLESRYNVHSLEINKCDFDDTAQYRVSAMNSEGELSAFASVIVKR
FKGDIDESLPAPRLGPVSEYGITFQIHIVDKFGVSFGREGETMSLGCTVIIYPALHRYQP
EIQWYRDDVLLSSSKWTHMHWSGDRATLTLTHLNKEDEGLYTLRVSTKSGYETYSAYVFV
RDSDAEVEGAPGAPLDVHCLDANKDYIIVTWKQPAVDGGNTILGYFVDRCEVGTSHWFQC
NDTPVKFARFPVTGLVEGRSYTFRVRAVNKSGISHPSRVSEPVAAMDPADRARMRGTSAP
WTGQIIVTEEEPAESVVPGRPLELQVTEATKNYVVLSWRPPGEKGLEGVMYYVEKCVSGT
DSWQRVNTEIPVKSPRFALFDLAEGKSYSFRVRCCNSAGVGEPSDPTEAITVGDKLDIPS
APGKVVPTRNTDTSVVVSWEASSDAKDLVGYYIEASVVGSNVWGPCNNKPVKGTRFICHG
LTTGEQYVFRVRAVNAAGLSQFSQISEPVEVKAAIASPAPPYGISVLECVRDSMVLAWKQ
PTFIGGADITGYFVDYREVIDGVPGKWHEANIKAISERAYRVSELKENRKYQFQVRAANM
AGVGIPSMPSNTFLCEEWTIAVPGPPHDLQVREVRSDSAVLLWKPPVYQGRNPVNGFYID
IKEADAPEEAWRGVNTKASEKTYIKIKDLKEGEKYVFRVRAQNKAGVGKTSDVTEPVPAV
TKPGTKEIVVDVDDDGIISLNFECSDLTPDSKFVWAKNYEEITDTNRLTTETKGNKSKAV
FNSLGEEDIGVYSCLVTHTDGASSSYTLSEEELKRLLEVSHDHKFPIIPLKSDLAVELLE
KGKVRFWLQAEKISVNGKVDYVFNDNVLSQGEKYKMNFDKNTGVIEMLMESLTPADEGTY
TFQMTDGKATNQSSLVLIGDVFKQLQKESEFQRKEWFRKQGPHFIEGLRYEVTPECCVIL
QCKVGNMKKETSAHWSKDGHEIKADEHLGFTEGVLKLEISQISKKDAGVYEVVLKDERGK
DTSTLNLTDQGFKDLMNEVFSFIANSSTPLKITSTDEGIRLYTFVSYYNDLLQVTWHYKD
SAIAFSDRIKSGVVGEQLWLQITDPTEKDMGKYAIEFNDGKGGLRRTVELSGQAFDDAFA
EFQRLKSAAVAERNRARVAGGLPDVVTIQEGKALNLTCNISGNPMPEVTWLKNDREITSD
DHCILKFESGKFASFTITAINTSDSGKYSILVKNKYGTESGDFTVSVFIPEEAGGKKK
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgagactctaccagtccagcagcagattcgctggcagcacgtccagctccaccagcagg
agcaggggacttaacgtgtctgcacacttgggactagaagggagcagagaaagccccttg
ctcaagagagccaagccatcgtacttggctgtggacaaagagaaccaaataattggctac
gtagtgccgatcttcaggggaagtcaagagtttgctacaggattatcagatacagaagaa
gccagagtgagaggcactgctgcatacatggcccgcaggaatttgtttaccagtggcctg
gagatggagaggtcagaggtcatttccaggaaggaggccatgcgtgagtcagctgagcgc
atctctatgagtaaaaggatccatgagcacgaggaacacttcaagcgcatgaacgaagac
agtctgatgcaccccccagagtttgtgattaaacctcgctcccacaccgtgtgggagaag
cagtgtgtgcggctgcactgcaccgtcagcggctggcctgaccccagggtcatctggtac
aaaaacaatgtggcaattgaccctcttgcccaccctggcaagtttaaacttgagagcaga
tacaatgtgcactcactggagatcaacaaatgtgattttgatgacacggcccagtatcgt
gtctctgccatgaactcagaaggagaactgtctgcatttgcttctgtcattgtcaaacgg
ttcaaaggtgacattgatgagtcgctgccagcacccagacttggtccagtttccgagtat
ggcatcaccttccagattcacattgtcgataagtttggggtgtcatttggaagagagggt
gagaccatgagtctggggtgcacggtcatcatctaccctgccttgcaccgctaccagcct
gaaatccaatggtacagagacgatgttctgctgagttcctccaagtggacccacatgcac
tggagtggggacagagccacactaacactgacacatctcaacaaagaggatgagggactc
tacaccctgcgagtctccaccaagtctggatatgaaacctattcagcctacgtgtttgtc
agagactctgatgctgaagtggaaggagcacctggagcccctctggatgtccactgtctg
gacgccaacaaggattacattattgtcacctggaagcaaccagctgtcgatggaggaaac
accatcttgggctactttgtggacaggtgtgaggttggaacctcccactggtttcaatgc
aacgacactccggtcaagtttgcccgtttccctgtgactggtttggtggagggccgttcc
tacaccttccgtgtacgtgccgtcaacaagagcggcatcagccatccgtctcgagtctca
gagccagtggctgccatggacccagctgatcgcgcccgcatgagaggtacttctgctcca
tggaccggacaaatcattgtcacagaggaggagcctgctgagagtgttgttcctggtaga
cctctggagctgcaggtgactgaggcaaccaaaaactatgtggtgctgagctggaggcct
cctggagagaaaggcctggaaggagtcatgtactatgtggaaaagtgtgtttctggcaca
gacagctggcagagggtgaacacagagatcccagtaaagtctcctcgctttgcactgttt
gatctcgctgagggcaaatcctactccttccgtgtccgctgctgcaactctgctggtgtt
ggcgagccttctgacccaactgaagccatcacagttggggacaaacttgatattccatct
gctccaggaaaggttgttcccactcgaaacacagacacatctgttgttgtgagctgggaa
gcatccagtgatgccaaagacttggtggggtattacattgaggccagtgtggtgggaagc
aatgtgtgggggccatgcaacaacaagcctgtaaagggcaccaggtttatttgccatggg
ctgaccacaggtgagcagtatgtgtttagggtgagggcagtgaacgcagcaggactcagc
cagttctcccagatatcagagcctgtggaggtgaaagctgcaatagcctcacccgctcca
ccctatggcatcagtgttctggagtgtgtgcgtgactccatggtgctggcctggaaacag
ccaaccttcatcggaggtgctgacatcaccggctactttgtcgattaccgtgaggtcatc
gatggtgtgccagggaagtggcacgaggccaacatcaaggccatcagtgagagggcctac
agggtgtcagaactgaaagagaacaggaagtaccagttccaggtgcgagctgctaacatg
gcaggtgttggcatcccatcgatgcccagcaacaccttcctgtgtgaggagtggaccatt
gcggttccaggaccccctcatgatctgcaggttagagaagtacgaagtgactccgctgtg
ttgctatggaaaccccctgtgtaccagggccgcaatccggtcaatggtttctacattgat
atcaaggaagcagatgcaccagaggaagcctggaggggagtcaacaccaaggcttcagag
aaaacatacatcaagattaaggatcttaaggaaggtgaaaagtatgtgttcagagtgcgt
gctcagaacaaagccggtgttggaaaaacttcagatgttacagagccagtccctgctgtg
accaaaccaggcaccaaggagatagtagttgatgtcgatgatgatggtatcatctctctg
aactttgaatgcagtgacttgacccctgactccaaatttgtgtgggccaagaactatgag
gaaatcacagacaccaaccgcctgaccacagagaccaaaggaaacaagtccaaagctgtt
tttaactctcttggggaggaggacattggtgtttactcatgtctcgtcactcacactgat
ggtgcttcatccagctataccctctctgaggaagagttgaagaggctgctggaggtcagt
cacgaccacaaattccccattattcccctgaagtcagacttggcagtggagctgctggaa
aagggaaaagtgcgcttttggctgcaggcagagaagatctcagtgaatggcaaagttgat
tacgtatttaatgacaatgttctctctcaaggagagaaatacaaaatgaattttgacaag
aacacgggtgtgattgagatgcttatggagtctctgaccccagcagatgagggcacatac
accttccagatgacagatgggaaagctacaaaccagtccagcttggtactgattggtgat
gtgttcaagcagctgcagaaagaatcagagttccagagaaaagagtggttcagaaagcaa
ggtcctcactttattgaaggtttgcgttatgaggtcactccagagtgctgtgtaatactg
caatgcaaggtaggcaacatgaagaaagagacttcagctcactggtccaaagatggacat
gagatcaaggcggacgaacatctcggcttcacagagggagttctgaaactggagatatcc
cagatttccaagaaggatgctggtgtgtacgaggttgttctgaaggatgagagaggaaaa
gacacgtccacattgaatctaacagatcagggcttcaaagacttgatgaatgaagttttc
agttttattgctaattcctccactccactgaagatcacaagcacagatgaaggaatccga
ctctacaccttcgtcagctactacaacgatttacttcaagtcacatggcactacaaggac
tctgccatcgccttctctgaccgtataaagagcggtgtggtcggcgaacagctgtggctt
cagatcaccgatcccacagagaaagacatgggaaaatacgccatcgagttcaatgacgga
aagggcggcctcaggagaaccgtggagctgtctggacaagcatttgatgatgccttcgca
gagttccagaggcttaaatctgcagctgtggcagaaagaaatcgtgctcgagtagcagga
ggtctgcccgatgtggtgacgatacaggagggcaaggctctcaatcttacctgcaacatt
tcgggtaacccgatgccagaggtcacctggctgaagaacgacagggaaatcacgtccgac
gatcactgcatcctgaagtttgagtcgggcaagttcgccagcttcaccatcacggccata
aacacgtcggactctggcaagtacagcatcctggtgaagaacaagtacggcacagagagc
ggagacttcaccgtaagtgtgttcatccccgaagaggcaggcggcaagaaaaaataa
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