Nematolebias whitei (Rio pearlfish): 119426720
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Entry
119426720 CDS
T08042
Symbol
ube3c
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119426720 (ube3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119426720 (ube3c)
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119426720 (ube3c)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
HECT type E3
119426720 (ube3c)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
119426720
NCBI-ProteinID:
XP_037550232
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All DBs
Position
20:complement(26943966..26974462)
Genome browser
AA seq
1081 aa
AA seq
DB search
MFSFEGDFKTRPKVSLGGASKKEEKASLLHRTQEERRKREDERKRLKNAVIIQSYIRGYQ
NLKQQYAIQRARFDESMSQSQAGGAQRVMDSATLCLISRRLIFFYRQNMDAHRLVWLCQN
LVKHNSQFVKLLVGPQKQTCMFQIKRILGFCCRLLQNCTDESLNVAVPMRMLEVFSTEKT
YLPIIPDANYVASLLEQILHYMVQKGYYRSLYILVNHRLPCSLEYSDTPSIPLASTLLAH
IFKPLHFTYSSCTTGARQFVFAAFTEEFISAPFTEQIFHFFIPALSDRCLSFPLEAFLNS
LQATINSSSAAQSQAPWLFYFVLSAGENCLSSLSEEGHLLYLQALQTLLPLLPVSENTNK
PEVNSDSEDDDDADLHSLPMQDDSRISVQQITEECIRKLDMKQQTNALLNLVWRDSASEE
VFTMMASICHILMVQHRLMVPKVRLLYSLAFNARFLRHLWYLITSMKTKMITGSMVPLLQ
LISRGSPMSFEDSNRIIPLFYLFSSLFSHSLISVHDSEFFGHEMEGQMQSSMMPFTLSEL
VNLSRCLRDACLGIIKLAYPETKAEHREEYMAAFRSVGVKTNSEVQQRIQAEQKRWVQLF
KVITNLVKMVKARDIRRPFCPAGHWLSEEVNIRADKVPQLYVPSARHAWRTRRRGHIGPL
QSTLDVGSEPPQMSVSEERHLAILTELPFVVPFEERVKIFQRLILVDKQDVQGDGPFPDG
INVTIRRNYIYEDAYDKLSPENEPDLKKKIRVHLLNAHGLDEAGIDGGGIFREFLNELLK
SCFNPNQGFFKTTNEGLLYPNPAAEMLVGDSFTRHYYFLGRILGKALYENMLVELPFASF
FLSKLLGTSADVDIHHLASLDPEMYRNLLFLKSYEGDVEELGLNFTVVNNDLGEAQVVEL
KPGGKDIPVTTANRIAYIHLVADYRLNKHIRPHCLAFRQGLANVVNLEWLRMFDQQEMQV
LISGAHVPICLDDLKNFTNYSGGYSANHPVIQIFWEVVEGFTDEEKRKLLKFVTSCSRPP
LLGFKELYPVFCIHNGGNDLDRLPTASTCMNLLKLPEFCDQQLMRRKLLYAIESSAGFEL
S
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcttcgagggagatttcaaaacaagacccaaggtctcactaggaggggcaagt
aaaaaggaggaaaaggcatctttgttacatcgcactcaagaagaaagacgaaaaagagag
gatgaaagaaaacgactgaagaatgctgtcatcatccagtcctacattcgtggctaccag
aacttgaaacaacagtatgccattcagagggctaggtttgatgagagtatgagccagtca
caggcagggggggctcagcgtgtcatggatagtgccaccctctgcctcatatcaagacga
cttatatttttttaccgacaaaacatggatgcacatagattggtatggctatgccagaat
ctggtaaagcacaatagtcagtttgtgaagttgttagtcggcccacagaagcaaacatgt
atgtttcagatcaaaagaatcttgggcttctgttgcaggctcctgcaaaactgcactgat
gaaagtttaaatgttgcagttcccatgcgcatgctagaagttttttcgacagagaaaacc
tatcttcctattattccagacgctaactatgtagcttctttactcgagcagattttgcac
tatatggttcagaaaggatactacaggtcgctatatattcttgtaaatcacagactcccc
tgcagtctggagtacagtgacactccatctattcctctggcaagcacgctgttggcacac
atcttcaaacctctgcactttacctactcctcctgcacaacgggcgcaaggcagtttgtg
tttgcagcttttaccgaggagttcatctctgcaccgtttaccgagcagatatttcacttt
tttatcccggcactgtcagaccgctgtctctcatttccattggaggccttcctgaattcc
cttcaggccacaattaactcttcttcagcagcacagagccaggcaccatggctcttttac
tttgtcctttctgcaggggaaaattgtttaagctcactttcagaggaaggtcacctgctg
taccttcaagctctgcagacgctgctgccgctgctgcctgtgtcagaaaataccaacaag
cccgaggtgaacagcgactctgaggatgatgatgatgctgacctccactctttgccaatg
caggatgacagccggatttctgtgcagcagataacagaggaatgcattcgcaagctggac
atgaaacaacaaaccaacgccctactgaacctggtgtggagggactcggccagtgaggag
gttttcaccatgatggcgtccatttgtcacattcttatggtgcaacatcgtctaatggtg
ccaaaagtcaggcttctgtacagtttagctttcaacgcacgtttcctgaggcatctctgg
tacctgataacatccatgaaaactaaaatgattactggctccatggtgcctctgctgcag
ctgatctcacgagggtctcctatgtcatttgaagactcaaaccgcataattccccttttc
tatctctttagctctctcttcagtcactctcttatttcggtgcatgacagtgaatttttt
ggccatgaaatggaaggtcaaatgcagtcgtccatgatgcccttcacactatcagagctg
gtgaatttgtctcgctgcctgagagatgcatgtctgggaatcatcaagctggcttacccc
gagactaaagcagagcacagagaggagtacatggctgctttccgcagcgttggtgtcaag
accaactctgaggttcaacagcggatccaggccgagcagaaacgctgggtgcagctcttc
aaggtcatcactaacttggtgaagatggtgaaagctcgtgacatcagacgacccttctgc
cctgcaggacactggctctccgaggaggtcaacattcgagctgataaggtcccccagctg
tatgtaccatcagcaaggcatgcatggagaacacggaggaggggtcacattgggcctctt
cagtcaactcttgatgtgggatcagagcctccacagatgtccgtgtctgaagagagacat
ctggccatcctcacagagctcccgtttgtcgttcccttcgaggagcgagtgaagatcttc
cagaggttaatcctcgttgacaaacaagatgtgcaaggggacgggccgttccctgatggc
atcaatgtcaccatccgaagaaactacatctatgaagacgcctacgataaactctctcca
gaaaacgagccggaccttaagaaaaagatccgagtccatcttctcaatgctcatggtctg
gacgaggcaggcatcgacggtggtggcatctttcgcgagttcctcaacgagctcctcaag
tcgtgcttcaatcccaaccagggcttcttcaagacgaccaacgagggtttgttgtatccc
aaccccgctgcagagatgcttgtgggcgactccttcacaagacactactacttcctgggc
aggatccttggaaaggcgctgtacgagaacatgttagtggagctaccttttgccagtttt
ttcttatccaaacttctgggaaccagcgcagatgtggacatccaccacctggcgtctttg
gacccagagatgtatcgcaaccttctcttcctcaaaagctatgagggtgacgtggaagag
ctcggcctcaacttcactgtggtcaacaacgatctgggagaagctcaggttgttgaactg
aagccaggaggcaaagatattcctgtgacgacggcaaatcggatagcttacattcactta
gtggctgactacagactgaacaagcacatcaggcctcactgtctagccttcagacaaggt
ctcgccaatgtggtcaaccttgagtggctgcgtatgtttgaccagcaggagatgcaggtg
cttatatctggggcacatgtgccaatttgtctcgatgacctaaagaacttcacaaattat
tcaggtgggtactctgccaatcaccctgttatccagatcttctgggaggtagtcgaagga
ttcacagatgaagaaaaacgcaaactattgaagttcgtcaccagttgctcgcggccgccg
ctgctgggctttaaggagctctacccagtcttctgcatccacaatggtggaaacgatctg
gaccgcctgcccaccgctagcacctgcatgaacctactcaagctccccgaattctgcgac
cagcagctgatgaggcgcaagctgctgtatgccatcgagtcttctgcagggttcgagctg
agctga
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