Nematolebias whitei (Rio pearlfish): 119426785
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Entry
119426785 CDS
T08042
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119426785 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
Other domain-containing proteins
Patched domain-containing proteins
119426785 (ptchd1)
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GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
119426785
NCBI-ProteinID:
XP_037550294
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Position
20:complement(475677..480357)
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AA seq
610 aa
AA seq
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MKWVRNENKNKNVGYLKHETMRQCGREAETGERLTSAVYRCSKSGIGSDTGDEHVIEVCM
TGHGLFGSFEMLSSWRRTREDQHVKERVASVFEDVMLRFSGSTMIHLMTLGLAASPLTNM
EAVRLFCGTAALTISISYVYMLSFYSSCLVFTGYLETRYRHGCFCRRVPKQDRLDSKPAW
YRCLMYTRYQDEMQSSNLPQGDSHLLLGCVHRCYGDWITNTYVKPFVVLLYLVYISFALM
GFLQVTQGSDPSALVAMDTATVLYTRAQQRYFSSYSPVIGFYIYESAPYWNVSVQQDLLE
YAKGFQRISWLESYLNYLLDRNESTNQLRENFTHTLRHSFLREPQFAHFEDDIIFAERSQ
GEEPDVAASRIFLVAKTTENKREEMSVLLDTLRRLSLTSRVRFLIFNPSFVYLDRYATAV
SSPLRHSLLAVLFLLGLSSMAFVEPLVSVWLGLTLLSVQFGVLGFMTLWGVEMDCMSVLC
LISALGHSTDCSGPLLCGFASGRGESRTRWVRLALERHGVPSLQTLVCYSAALGPVGCVR
SNLTSTLFRCLILTAGCSALHTLAFLPTLLTFLPPSKSGDHRPGKDCQRQEVECVEMNDS
TRVVDQITTV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgggtcaggaatgagaacaagaacaagaatgttggatacttaaaacacgagaca
atgagacaatgtggcagggaggcagagactggggagcgcttaacaagtgcagtgtacagg
tgcagcaagagtgggattgggagtgacacaggtgatgagcatgtgattgaagtgtgcatg
acaggccacggtctcttcggctcctttgagatgctgtcatcatggaggcgaacacgcgag
gaccaacatgtgaaagagcgtgtggcaagtgtatttgaagatgtcatgctgcgtttttct
ggatccactatgatacatctgatgacgctgggcctggccgcctcgccactcaccaacatg
gaagcagtgcggcttttttgtggcaccgctgccctcaccatcagcatcagctatgtttac
atgttgtcattttacagctcctgtctggtgttcactggctacctagagacccggtacaga
catggctgcttctgccggagagtccccaaacaggacagattggactctaaaccggcttgg
taccggtgtttgatgtatactcgttaccaggatgagatgcaatcgtccaacctgccacaa
ggggattcacaccttttactggggtgtgtgcatcgttgctatggggactggatcactaac
acttatgttaagccctttgtagttctactgtatctggtttacatctcctttgcactgatg
gggttcctacaggtgacccaagggtctgaccccagcgctttagtcgccatggatacagca
acagtactgtacactcgtgcccagcagcgttacttcagttcctactccccagtgattgga
ttctacatctatgaaagtgcaccctactggaatgtctcagtacagcaggacctgctggag
tacgccaaaggcttccagagaatcagctggctggagtcttacctgaactatctgttagac
cgcaacgagtccaccaaccagctgcgggaaaacttcacccacacactgcgccactccttc
ctccgtgagccgcagtttgctcactttgaggatgatattatatttgctgagcgcagccag
ggggaggagcctgacgtggcggcttcacgcatctttctggtcgccaagacaacagagaac
aagcgtgaggagatgtcagtgctgctggacacactacgtcgtctatccctcacttcccgt
gttcgctttctaattttcaacccctcttttgtctacttggaccggtacgctacagctgtc
agctcccccctcagacactcactgctggcggtgctctttctgttggggctgtcctctatg
gccttcgtggagccactagtgtctgtgtggctgggtctcaccctgctctctgtccagttc
ggagtgctgggcttcatgactttatggggggtagagatggactgcatgtctgtgttgtgt
ttaatctcagctctgggacactccacagactgcagtggcccactcctttgtggctttgcc
tcaggtcggggtgagagtaggactcggtgggttcgattggcattggagagacatggcgtc
ccttctttacagacgctcgtgtgctacagtgctgccctgggacctgttggttgtgtacgc
tcaaacctcacaagcacacttttccgctgcctcattctaacggccggctgctcagccctg
cacacgttggccttcttgcccactctcctcacattcctacccccatccaagagcggagac
caccgtccaggaaaagattgtcagcggcaggaggtggagtgtgttgaaatgaatgacagc
accagagtagtggaccaaattactactgtttga
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