Nematolebias whitei (Rio pearlfish): 119427005
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Entry
119427005 CDS
T08042
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein-like
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nwh03037
]
119427005
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119427005
Cilium and associated proteins [BR:
nwh03037
]
Other cilia and associated proteins
Stereociliary proteins
119427005
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
119427005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
119427005
NCBI-ProteinID:
XP_037550507
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All DBs
Position
21:complement(10724315..10736272)
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AA seq
714 aa
AA seq
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MSEQIFILFLLWSLRVADTTTGSWRQCADLPPLDLLSFVLERDTSKLVSGVHVEQSDGVR
GVHFLSPDAFMSFPSSQLLVNCDLFPKQFSIVSTFKVNHIAPKRNEYIFSLLEPKHGEKN
AAQDMEDTLKKDKKMNLSGEEQQMKKKPNRKHEEPGRVILGLKLSQSGLHFFFKGRQEAV
ERGMFRGISLDDNQWHTLILVVQHHHVRLTVDCKSPLEIVPARPFPSDLNIQGSRVHVGS
RGRWKGLFSGLLRQLVLVPNVDTAYQMCPSSDPQLAALSVPPLLLDLPVGTQQDDRRTTS
SESMQQVSVGLESSCSELLQGQLWFDPLKRGLYLCNGSSWITVLEDHKRLDYVLEHQVLS
TSSETHDVEVFQIPGVGLMAAMAHRSSASGSAVYLWTHSGFQLYQNISTYGALAWRHFRM
GKRMFLVVSNSGAGTDKQLNKESEMDFSVIYKWSNRRKRFVQFQMLQTYCARDWEAFSIG
QHTYLAVANHRQGNNNHTINSVIYRWSRSTKSFEVHQLLLTSGAYDWEFFTVGPYHFLVV
ANAFDGVTTSVDSVIYVWMDGRFHVFQTIKTFCATDWEMFQIGSRVFLVVANGHRLDGNG
PSQYTINSTVYELDMSGRMFVRFQDIVTHSAVDWEFFSLGEEYFLVVANSYSGESYSLNS
ILYRWQGYEGFVPIHWLPTIGCSDWEFFSSKGESYLIYSSAKAPLTKIFKLKTY
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcagatatttatccttttccttctttggagtttgagggtcgctgacacaaca
accggctcatggaggcagtgcgcagacctgccacccctggatcttctgtcctttgttctc
gagagggacacctccaaacttgtgtccggggtgcatgtggagcagtcggatggggtgagg
ggcgtccatttcctgagccccgatgccttcatgagcttcccctcctcccagctattggtg
aactgtgaccttttccctaaacagttttccattgtttcaacatttaaagtaaatcacatc
gcaccaaagagaaatgaatacatcttttcattgctggaaccaaagcacggagagaaaaat
gcagcgcaggacatggaggatactttaaaaaaggataagaagatgaatttgtctggagaa
gagcagcagatgaagaaaaagcccaacaggaaacatgaggaaccggggcgagtcatcctc
ggcctgaagttatcccagagcgggctgcatttcttttttaaaggccgtcaagaggctgtg
gagcgcgggatgtttcgaggcatctcactggatgacaaccagtggcacactcttatttta
gttgtgcaacatcatcacgtgaggctcacagtggactgcaaatcacctctggaaatcgtt
cccgccaggcctttcccctcagacctcaacatccagggatccagagtccacgtcggcagt
cggggcagatggaaaggcttgttttcaggtcttcttcgacagctggttctcgtgccaaac
gtagacaccgcataccagatgtgcccctcctctgacccccagctcgcagctctgtcagtc
cccccgctgctcctagacctgcctgtcggaacacagcaggacgacagacggacaacttcc
tctgaaagcatgcagcaagtgtcagtgggtttggagagttcatgctccgagctgctgcag
ggccagctgtggtttgatccgctcaagaggggcctctacctctgcaacggttcatcgtgg
atcactgtgttggaggatcataaaaggctggactacgtgttggaacatcaagtcctctcc
accagctcagagacgcacgatgtggaggtgtttcagattcctggtgtaggtctgatggct
gctatggctcaccggtcctcagcctccggctcagctgtgtatctgtggacccattcaggt
ttccagctctaccagaatatcagcacatatggagctctggcttggagacatttcagaatg
ggaaaaaggatgtttcttgtcgtgtctaattctggggctggtacagacaagcagcttaat
aaagagtcagagatggatttttctgtcatttacaagtggagcaacagaagaaaacgattt
gtgcagttccagatgctgcagacctattgtgcacgagattgggaggcctttagcatcggt
caacatacgtatctagctgtggccaatcatagacagggtaacaataatcacacgataaac
agtgtgatatacagatggagcagatcgacaaagtctttcgaggtgcaccagttgctgctc
acttcaggcgcctacgactgggagttcttcacagttggaccgtatcatttcctggtggtt
gcaaacgctttcgatggcgtgaccacttctgtggactctgtcatctatgtttggatggac
ggaagatttcatgtgtttcagacgatcaagacattctgtgccacagactgggaaatgttc
cagattggcagcagagtgtttctggttgttgccaacggacacagactcgacggtaacgga
ccaagtcagtacaccattaactcaaccgtctacgagctggacatgagtggacggatgttt
gtccgcttccaggacatcgtcacccacagcgcagtggattgggagttcttcagcctcggg
gaggaatattttctagttgttgctaactcctacagcggagaatcctactctctcaacagc
attctttacaggtggcagggatatgaaggatttgttcctattcactggctcccaacaatc
gggtgcagtgactgggagtttttcagctctaaaggagaatcatatttaatctactcaagt
gccaaagcacctctcaccaaaatattcaagctaaaaacttactag
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