Nematolebias whitei (Rio pearlfish): 119427226
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Entry
119427226 CDS
T08042
Name
(RefSeq) neuronal PAS domain-containing protein 3
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119427226
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119427226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
119427226
NCBI-ProteinID:
XP_037550733
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All DBs
Position
21:complement(30405648..30568062)
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AA seq
1003 aa
AA seq
DB search
MGFDSLSLAAVDPYWERPSNAGSCSAARPKTLHLAGQQHTSSPWLQALRKEKSRDAARSR
RGKENFEFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPP
NTSVKAIGTQRRRSPSAIASDIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLG
LSQVELTGSSAFDYIHPGDHVEMAEQLGMKLPPGRGMSLSQGAVTEDGTSSASSSSHSET
PEPVESNSPSLLSPDNSLERSFFIRMKSTLTKRGVHIKSSGYKVIHVTGCLRIRMALTHS
RSVPNQIMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLKIVYCENRINDYMDLTPVDI
VGKRCYQLIHAEDVEGIRQSHLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNS
NEKNIVWVNYVLSNPEYKDTPIDIVQLPNLPEKTSESSESSDSESDCKENSDNEKPEGKS
AQQVEHIEDPDSKRQQPHGQTHCSSEQETKRHEEGDSSSNPESQESDDSLEPSDGEQEQE
VTRGGVGEGGGRLGRLAGLGGLEGLGAISGLGNLGGLHIKVEHYGEGEELQLHNSQTSSE
EEEQDEEDEEDEEEGGGVQDCDGVSAGRTLQKRRKRRKVQKWDGSRSRRLRLSVPLSPSA
AEDLTPPADPSEASSISSAHLLTSSESPNGTGATSSVLKIKTEMAEPINFDNDSSIWNYP
PNREISRNESPYSMTSKPQAPGGLETFPSPQGGSLHVVIPDSVLTPPGTEGGAGGGRKPP
YNGSSAPSSSSSATSLAPPSNTSSADPLSPPLSASPRDKQQGTPTTSSSSSTSSSSSSTS
SSSLLYSGDLEALQRLQASNVVLPLVHRVTGTLAPSSTTAPRVYTTGTIRYAPADVTLAM
AQGNLLPNAAMNFVDSSGFGLDPKTPMEMLYHHVHRLNMTAAAAAGPFVGSTAPAGGNGT
LGGPMPAAANVFTTAEGLFSTLPFPVYSNGIHATQTALERKED
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgacagcctgtctttggcggctgttgacccctactgggagcggccgtctaat
gcaggcagctgctccgccgcccggcccaagacccttcacctggcgggccagcagcacacg
tcctcaccatggctgcaggctctccgcaaggaaaagtcccgggacgctgcaaggtcgcgg
cggggaaaagagaactttgagttttacgagttagccaagatgctgccgctgcctggcgcc
atcaccagccagctggacaaggcctccatcatccggctcaccatcagctacctgaaaatg
agggacttcgccaatcagggggacccgccgtggaacctgcgcatcgaggggcccccgccc
aacacgtcggtcaaagctattggtactcagcggaggaggagtcccagcgccatcgcctcc
gacatcttcgagcctcacctgggcagccacattctacagtcgctggacgggttcgtattt
gcactaaacaaggagggacgattcctctacatctctgagactgtttccatctacctgggc
ttgtcgcaggtggagctgaccggcagcagcgcgttcgactacatccaccccggggaccac
gtggagatggcggagcagctcggcatgaagctgcctccgggccgagggatgtctctgtcc
cagggagccgtcacagaagacgggacgtcctcggcttcttcgtcgtctcactctgagact
cctgaaccagtggagtccaacagtcccagtctcctgtcgcctgataattctctggaacgt
tccttcttcatccggatgaagtctacgctcaccaagagaggagtgcacatcaagtcctca
ggatataaagtgatccacgtcaccggttgtctgcggatccggatggctctgacccacagc
cgctcggtgcccaatcagatcatggggatggtggtggtggcccacgccctgccgccaccc
accatcaacgaggtccgcatcgactgtcagatgtttgtgaccagagtcaacatggacctg
aaaatcgtgtactgcgagaacaggatcaacgactacatggacctgactccggtggacatc
gtggggaagaggtgctaccagttgatccacgctgaagatgtggaggggatcagacagagc
cacctggacttgatgaataaaggtcagtgtgtgaccaagtattaccggtggatccagaag
aatggcggctacatttggattcagtccagcgccaccatcgccatcaacgccaagaactcc
aatgagaagaacatcgtctgggtcaactacgtcctcagtaatcctgagtataaagacaca
cccattgacatcgttcagctgccaaacctgccagagaaaacgtcagagtcttcggaaagc
tcagactctgagtccgattgcaaagaaaactcagacaacgaaaagcctgaggggaagtcg
gctcaacaagtggagcacatcgaggacccggacagcaaacgccagcagccgcacgggcag
acccactgctcctccgaacaggagacgaagcggcacgaagaaggagacagctccagtaac
ccggagagccaggagagcgacgacagcctggagccttcagatggagagcaggagcaggag
gtcaccaggggaggggtgggagaaggaggaggcaggctggggaggttagcgggactggga
ggattagagggtcttggtgccatcagtggactgggtaatctgggtggccttcatattaaa
gttgaacactacggagaaggtgaggaactccaactgcacaactcacaaacctcctcagag
gaggaggagcaagatgaggaggacgaagaggatgaggaagaagggggaggagtccaagac
tgcgacggtgttagtgccggccgcacgctccagaagaggaggaagaggaggaaagtgcaa
aagtgggacgggtcacgaagcaggaggctccgtctgtcagttccactcagcccttcagca
gcagaagacctcacacccccggccgacccctcggaggcctcgtccatctcctctgcccat
ctcctgacctcctctgagtccccaaacggcacaggagcaacgtcctcggttctgaagatc
aagacggaaatggccgagccgatcaacttcgacaacgacagcagcatttggaactacccc
cccaacagagagatctccagaaacgagtccccgtacagcatgacctccaaaccacaggcc
cccgggggtctcgagaccttcccgtcgccgcagggggggtctctgcacgtggtcatccct
gactctgtcctcacccctcctggcactgaggggggagcaggaggggggaggaagcctcct
tacaatggaagctctgcgccatcgtcttcttccagcgctacaagtttagctcctccttcc
aacacctcctccgccgaccccctgtctcctcctctctctgcctccccgcgggacaagcaa
caaggcactcctaccacctcctcgtcttcttccacctcctcctcttcgtcctcaaccagc
tcttcctcactgctgtactccggtgatcttgaagctctccagcgtttgcaagcgagcaac
gtggttctcccgctggtccaccgggtcaccgggactctggctcccagcagcacgacagct
ccacgggtctacacgactgggaccatcaggtacgcgccagcggacgtcactctggcaatg
gcacaagggaacctcctccccaacgccgccatgaacttcgtggacagctcggggtttggt
ctggaccccaagacgcccatggagatgctctaccatcacgtccacaggctgaacatgacc
gccgccgcagccgccggtccgttcgtcggatccacggcgcccgcgggcggtaacggcaca
ttaggaggcccgatgccggcggcggccaacgttttcaccacagccgagggccttttctcg
acgctgccgttcccggtgtacagcaacgggatccacgcgacgcagacggctctggagagg
aaggaggattaa
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