Nematolebias whitei (Rio pearlfish): 119427228
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Entry
119427228 CDS
T08042
Name
(RefSeq) tripartite motif-containing protein 35-like
KO
K12012
tripartite motif-containing protein 35
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119427228
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119427228
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
U-box
DUF4618
Prok-RING_4
Trm112p
Cep57_CLD
Cortex-I_coil
FemAB
Motif
Other DBs
NCBI-GeneID:
119427228
NCBI-ProteinID:
XP_037550737
LinkDB
All DBs
Position
21:30764451..30765509
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AA seq
352 aa
AA seq
DB search
MSSWPENNISCPICHDIYQDPVILFCSHSLCGACWQQWKTQRQTPECPVCRRICPPYDPP
QNLALRHVCEAFSKDSSERHSAAPSGLCSLHGEKFKLFCLEDQQMVCPICRYSRCHTNHS
FRPLEEAAAEHRATLQELLRPVHEKKDLLTVAGDNFNQALQNIEIQCHDTERQIKDVFST
IQSFIKKEEEFRLAALSKEKQQKNQSLRMKREAMKREATSLTDIISSTERELRAEDIPFL
QNYPNLATSIQRVLSSLTDPTPEPLMEVDKHLNNLPFSIWDKIKGAISIMYQFPSPISTL
NAPRVYENFVENRTPSAPLKSAFARQRFSVALPSESVPVRRYKSQMDLTLTR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttggcctgaaaacaacatctcctgtcccatctgccatgacatctaccaggat
ccagtcatcttgttctgcagccacagtttatgtggagcctgttggcaacaatggaaaaca
cagaggcagactcctgaatgtccggtctgcaggaggatctgtcccccatatgacccacct
cagaacctggctttaagacacgtgtgtgaggccttctcaaaagacagcagcgagcgacat
tcagcagctccttcagggctctgcagcctccacggtgagaaattcaagctcttctgtcta
gaagatcagcagatggtgtgtcccatctgtcggtattcaagatgccacaccaaccacagc
ttcaggcccctagaagaagctgccgcggaacacagagcgacgcttcaggagctcctgaga
cccgttcatgagaagaaggacctcttaactgttgctggagacaattttaaccaggcatta
cagaacattgaaatccagtgtcatgacacggagaggcagattaaagacgtgttctccacg
attcagtcgttcatcaaaaaggaggaggagtttcgactcgctgccctgagcaaggagaag
cagcagaagaaccagagtttaaggatgaagcgtgaggccatgaaaagagaagcaacatct
ctcacagacataatcagctccaccgagagggagctgagagctgaagacatccccttcctt
cagaattatcctaacttagcgacgagcatacaacgtgttctgtcgagtttaacggacccc
acccctgagccactgatggaggtggacaaacacctgaacaacttgcccttcagcatctgg
gacaagatcaaaggggccatctcgatcatgtaccagttcccaagcccaatctcgactctg
aacgcaccacgtgtttatgaaaactttgttgagaacaggacaccttctgcaccactgaaa
tcggcttttgcgagacagagatttagcgttgcgttgcccagcgagagcgtacctgtccgg
cgttacaaaagccagatggatctgacgcttacaaggtaa
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