Nematolebias whitei (Rio pearlfish): 119427312
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Entry
119427312 CDS
T08042
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04137
Mitophagy - animal
nwh04140
Autophagy - animal
nwh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119427312 (hif1aa)
04137 Mitophagy - animal
119427312 (hif1aa)
04148 Efferocytosis
119427312 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119427312 (hif1aa)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119427312 (hif1aa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
119427312
NCBI-ProteinID:
XP_037550825
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Position
21:complement(16671579..16686697)
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AA seq
752 aa
AA seq
DB search
MDTGIIPEKKRVSSERRKEKSRDAARCRRGKESEVFYDLAKQLPLPHSTGSSLDKASIMR
LTISYLRMRKLLCTDEPMVENETELDIQLNGFYLKALEGFLMVLSEDGDMIYLSENVNKC
LGLAQFDLTGHSVFDFTHPCDQEELREMLIYRTGSKKVKEPNTERSFFVRMKCTLTSRGR
TVNVKSATWKVLHCSGRVHVHDSHAEPTTEGQKEPPVPYLVLICDPIPHPSNIEVPLDTK
TFLSRHTMDMKFTYCDDRITELVGYDPEDLLNRSVYEYYHALDSDHLTKTHHHLFAKGQV
TTGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQENQLILSLEQTQDV
KPVKDEEEEEEEENVEIESSITVLVKKEEKTPQLDVVKLFTEMVGPGPVGTLYERFKHNS
EALTQLAPAAGDTFISLDFSCPGTESNVHVLKDDPLYSDVMLPSTSDKLTLPLSPLPPSE
AFTVSNTPSEEVKSENFAPAPTTTPPHVSSEAENPLGFSFPIDSDMNSDFKLDLVKFFAV
DPESKPHFNTQPMEDLDLEMLAPYIPMDDDFQLRCLTPDEPLTCGPVKSLETSPVLIKQE
AHSYPKSLFSPSDSRTVSPAPPEPVSTLSPATIDLARAPDVEKTVSLRTPAAQKTQRKRK
LSELKEMIEQGNLPLDQLEKGKKLKATEPGVTVLLLPSDVASRLLATSSDSTSPLSTLPH
LTSYDCEVNAPLQGRQYLLQGEELLRALDHVN
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattatacctgaaaagaaaagggtgagctcagagcgcaggaaggagaag
tcgagggatgcagcgagatgccgtcgtggaaaggagtcagaggtgttctatgacctggcc
aagcagctgcccctcccccacagcaccggctcgagcctggacaaggcctccatcatgagg
ctgaccatcagttacctgcgcatgagaaaactactctgcacagatgaaccaatggtagag
aatgaaaccgagctcgatattcagctaaacggcttctacctaaaggcactggaaggcttt
ctaatggtgctgtctgaagatggagatatgatctatctctccgagaatgtcaacaagtgc
ctcgggcttgcacagtttgacctgactggacacagtgtgtttgacttcacacatccctgt
gatcaggaggagctgagagagatgctcatctacagaacaggctctaagaaagtcaaggaa
ccaaatacagagcggagcttctttgtccggatgaaatgcaccctgacgagcaggggccgc
accgtcaatgttaagtccgctacgtggaaggtgcttcattgctcgggtcgtgtgcacgtt
catgacagtcacgctgagccgaccaccgaggggcagaaggagcctccggtcccatacctg
gttctgatctgtgatcccatcccccacccttccaacatcgaggtccctttggacacgaag
acctttctcagccgtcacacgatggatatgaagttcacatactgtgatgacaggatcaca
gaactcgtgggttatgatccagaggacctgctgaatcggtctgtgtatgagtactatcac
gctctggactcggaccatcttaccaaaacgcaccaccacttgtttgctaagggccaggtc
accacgggtcagtaccgaatgttggcaaaaagagggggctttgtatgggtggagacacag
gccaccgtcatctacaacaataagaactcacagccacagtgtgtcgtgtgcgtcaacttt
gtgctcagcgggatccaggagaaccaactaatcctgtctttggagcaaactcaggatgtg
aagccggtgaaggacgaagaagaagaagaagaagaagaaaatgttgagattgagagcagc
atcactgtcctggtgaagaaagaggagaagactccacagctggatgtggtcaagctcttc
acagagatggtggggcctggaccagtgggcaccctctacgaacggttcaagcataattct
gaggctctcacccagctggcaccagcagctggggacacattcatctcgctggacttcagc
tgtcctggtacagaatcgaacgtccacgtgctgaaagatgatcccctctacagtgacgtg
atgctgccctccacaagcgacaagttgactctgcctttgtcccctctgcccccaagtgag
gcttttactgtctccaacaccccctctgaggaggtaaagtctgagaactttgctccagcc
ccaaccaccactcctccccacgtttcttctgaggcagaaaatcctttaggcttttctttc
cccatagattcagacatgaactcagatttcaaactagacttggtgaagttttttgccgtt
gacccagaatccaaaccccactttaatacacagccaatggaggacttggatctggagatg
ctggcgccctacatccccatggatgacgacttccagctgcgctgcctcactccggacgag
cctctcacttgtggaccagtcaaatctcttgagacgtctccagtcctcatcaaacaggaa
gcccacagctatcccaaatctctattcagtccttcagacagtcgcacagtttctccagca
ccaccagagcctgtcagtacgctgtctccagccaccatagacttggctagggctcctgac
gtggagaaaaccgtgtccctcagaacgccggcagctcagaagacgcagcgtaaaagaaaa
ctgagtgaactcaaagagatgattgaacagggaaatttgcccctagatcaacttgagaag
ggcaaaaagctgaaggcgacagagccaggagtaaccgtacttcttctgccttcagacgtg
gcgagtcgattgctcgccacctcttcagacagcaccagccccctctctaccctgccacat
ctcaccagctacgactgcgaggtgaacgcccccttgcagggccgtcagtacctgctacag
ggggaggagctgctgcgtgctctggaccacgtcaactga
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