Nematolebias whitei (Rio pearlfish): 119427316
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Entry
119427316 CDS
T08042
Symbol
six4a
Name
(RefSeq) homeobox protein SIX4a
KO
K15615
homeobox protein SIX4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119427316 (six4a)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
119427316 (six4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
DUF6374
Motif
Other DBs
NCBI-GeneID:
119427316
NCBI-ProteinID:
XP_037550830
LinkDB
All DBs
Position
21:16790110..16794290
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AA seq
679 aa
AA seq
DB search
MSSSSAGEVTTANDIKRENVKEVDRRECIKLVELDAAELSMERATPGADAVRTELLVSAA
SSLAFSPEQVACVCEALQQGGNVDRLARFLWSLPQSDLLRGNESILKAQALVAFHQARYQ
ELYSILENHNFNPTNHTFLQDLWYKARYTEAEKARGRPLGAVDKYRIRRKYPLPRTIWDG
EETVYCFKERSRNALKDLYNQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSE
AQSKSESDGNHSTEDESSKGQEELSPRPLSNSSDGVITHGSLPIHAGPLDGGVVIQQIGD
IKMSTGSSSGGLYNGSLVSSNTSSTVFHNGGSSYLHSPGNILFNGLNLGIQPLAFNPLRS
PGGVLLGGSGADLQMQTGQEKGLGSAEESTLQYSSYSSCVNGAEVKLEGIHSMAAQNGGS
SVLTFSSPSGALQVGGYSLVHVPGGVSDNDGNSLLSSDAGLPPLQLSSASPSSAITQQGN
MSLSNVAVSSSSDDSFQQQDKLTMTSLHHSTVLYSMNNAGQAPIKKEPLEGGVYASYHPG
LHMDPSGQISYADPNGEEISSTSTSEVTAVSSSSPVPEVYTTLTNSTPLMAQTDPNANHL
QPTEYLATHEVPRGAPSSHLMGPSLNSNYMNLSETKVDGSRSGVMNEMVQAMCGEMEAVE
GKELAKLQTVQMDEDMSDL
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcttctgccggagaggtcacaacagcaaatgacatcaagagggaaaatgtg
aaggaggtggataggcgggagtgcatcaagcttgtggagctggacgcggcggagttgtcc
atggagcgcgcgactccaggcgctgacgcggtgcgcacggagctgctggtgagcgccgct
tcctccctggctttctccccggagcaagtggcgtgcgtgtgcgaggcgctgcagcaggga
ggcaacgtggaccggctggcgaggttcctgtggtccctgccccagagcgacctgctccgc
ggcaacgagagcatcctgaaagcgcaagcgctcgtcgcgttccaccaggctcggtaccag
gagctgtacagtattttggagaaccacaacttcaatccgaccaaccacacctttctgcaa
gatctgtggtacaaggcccggtacaccgaggcggagaaggcgcgggggagacccctgggc
gcggtggataagtatcggatccggagaaagtaccctctccccaggactatctgggacggc
gaggagactgtttattgtttcaaggagaggtcgcggaacgcgctgaaggatctctataat
cagaataggtacccgtctcctgcagagaagcgaaatctcgccaagataacaggactctcc
ttgacccaggtcagcaactggttcaaaaacaggaggcagagggacagaaacccgtcggaa
gcacaatccaaaagtgaatctgatggcaatcacagcacagaggatgagtccagtaaaggc
caggaggagctgtcccctcgtcctctctccaattcttcagacggagttataacacatggg
agcctccctattcacgcaggacctctggacggaggggtcgtcatccaacagattggggac
atcaagatgtccactggctccagcagtggcggcctctacaatggaagcctggttagcagt
aacacttcctccactgtgtttcacaacggtggctcgtcctacctccactcacctggaaac
atcctcttcaacgggctcaatttgggcatccagccgttggcgttcaacccactgaggtcg
cctggtggggtgctgctggggggctctggagcagacttgcagatgcagactggacaggag
aaaggactgggcagtgctgaggagtccaccctgcagtactcctcgtactccagctgtgtg
aacggggcggaggtgaagctggagggtattcactccatggccgcccaaaacggaggctcc
tctgttctcacgttcagctcaccctcaggtgctctgcaggtgggtggctacagcctggtc
cacgtaccaggtggggtctctgacaacgatggcaactcattactcagcagtgatgcaggc
cttcctcccctgcagctctcctctgcctcaccttcctcagcaatcacacaacaaggtaac
atgtctctgagtaatgtggcggtgagctcctccagcgacgactcattccagcaacaagac
aagctgaccatgacgtctctgcaccacagtacagttctttacagcatgaacaacgctgga
caggcgcccatcaagaaggagcctctggagggaggggtttacgcctcgtaccaccccggg
ctccacatggatcccagcggtcagatcagctacgccgatccaaacggcgaggagatctcc
tccacctccaccagcgaggtgaccgctgtcagctcgtccagccccgtgccggaggtctac
accaccctaaccaacagcacgcccctgatggctcaaacagacccaaacgccaaccaccta
cagcctacagagtacctcgcgacccacgaggtgccacgaggggccccctcctcccacctg
atggggcccagcttgaacagcaactacatgaacctttcagagaccaaggtggacggctcg
aggtcgggggtcatgaatgagatggtgcaggcgatgtgcggagagatggaggctgtggag
gggaaggagctagccaaactacagacagtacagatggatgaggacatgtctgacctctag
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