Nematolebias whitei (Rio pearlfish): 119427323
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Entry
119427323 CDS
T08042
Symbol
six1a
Name
(RefSeq) homeobox protein six1a
KO
K15614
homeobox protein SIX1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119427323 (six1a)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
119427323 (six1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
Rrn6_K-rich
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
119427323
NCBI-ProteinID:
XP_037550838
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All DBs
Position
21:16801262..16803208
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AA seq
284 aa
AA seq
DB search
MSILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENNNAGGNKQNQLSPLDGGKSLMSSSEDEFSPPQSPDQNSALLLQGSMSH
PGASSYPMSGLGAPQPVHGMHGHPHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatccttccgtccttcgggtttacgcaggagcaagtggcgtgcgtctgcgaggtg
ctgcagcaaggaggaaacctggagaggctcggccgcttcctgtggtccctgcccgcctgc
gaccacctccacaagaacgaaagcgtcctgaaagccaaggcggtggtcgccttccaccgg
gggaacttcagggagctgtacaagatcctggagagccaccagttctcgccgcacaaccac
cccaagctgcagcagctgtggctcaaggcgcactacgtggaggcggagaagctgcgcggc
cggccgctcggcgcagtcgggaagtaccgggtgaggaggaaattcccgctgccccgaacc
atctgggacggcgaggagaccagttactgcttcaaggagaagtccaggggcgtgctgcgg
gagtggtacacgcacaacccctacccgtccccgcgggagaagagggagctggctgaggcc
acggggctgaccaccacgcaggtcagcaactggttcaagaacaggaggcagagggacaga
gccgccgaggccaaagagagagagaacagtgaaaacaacaacgcaggaggcaacaaacag
aaccagctgtcccctctggatggagggaagtctctcatgtccagctcggaggacgagttt
tctcctcctcagagtccggaccagaactctgcgcttttgcttcagggcagcatgagccac
cctggggcctcctcttaccccatgtccggcctgggggccccacagccggtgcacggcatg
cacggacacccacaccagctgcaggactccttgttgggacctctaacctccagtcttgtg
gatttgggctcttaa
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