Nematolebias whitei (Rio pearlfish): 119427468
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Entry
119427468 CDS
T08042
Symbol
snx6
Name
(RefSeq) sorting nexin-6 isoform X1
KO
K17920
sorting nexin-5/6/32
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119427468 (snx6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119427468 (snx6)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119427468 (snx6)
Membrane trafficking [BR:
nwh04131
]
Endocytosis
Macropinocytosis
Sorting nexins
119427468 (snx6)
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
119427468 (snx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
FAN1_HTH
AAA_lid_7
Motif
Other DBs
NCBI-GeneID:
119427468
NCBI-ProteinID:
XP_037551022
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Position
21:29990847..29997073
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AA seq
407 aa
AA seq
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MMQEGLDDGPDFLSEEDRGPRAVNVDLEMDATLQVDISDALSERDKVKFTVHTKSTLPNF
KQNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMTK
EEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRKDLNFHIFLEYNQDLSVRGKN
KKEKLEDFFKNVVKSADGVLVAGVKDVDDFFEHEKTFLLEYHNRVKDSSAKCDRMIRSHK
NAADDMNRIASSLYTLGTQESTDLCKFFLKVSELFDKTRKIEARVAADKDLKLADLLKYY
LRESQAAKDLLYRRSRALVDYENANKALDKARAKNRDVLQTETSQQLCCHKFEKISESAK
QELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQSCVSVLKGTT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggaagggctggacgacggacccgatttcttgtccgaggaggaccggggacct
cgagcggtgaacgtggatctggagatggacgccacgctgcaggtcgatatttctgatgct
ctcagcgagagagacaaggtgaagttcaccgtccacaccaagagcacgctccccaacttc
aaacagaacgagttctctgtggtgcggcagcacgaagagttcatctggctgcacgactcg
ttcgtggaaaacgaagactatgcaggatacatcattcccccggccccgcccagacccgac
tttgatgcatccagagagaagctgcagaagctgggagagggagaaggatccatgaccaag
gaggagttcacaaagatgaagcaggagctggaggcagagtacctggctatcttcaagaag
accgtggccatgcacgaggtcttcctgtgtcgcgtagccgctcatcccatcctcaggaag
gacctgaacttccacatcttcctggagtacaaccaggatctgagtgttcgagggaagaac
aagaaggagaaactggaggatttctttaagaacgtggtgaagtcagctgatggtgtcctg
gtggccggagtcaaggacgtggatgacttcttcgagcacgaaaagacgtttctgttagaa
tatcacaacagagtcaaagattcttcagccaaatgtgaccgaatgatccgctcccataaa
aatgctgctgatgacatgaacagaatcgcttcatctctctacacgttaggaacacaagag
tccacggacctctgcaagttcttcctgaaagtgtccgagctgttcgacaaaacgaggaaa
attgaagctcgagttgcagccgataaagacctgaagctggctgatcttctgaaatattac
ctgagagagtctcaggctgccaaggaccttctgtaccgaaggagccgagctctggtggac
tacgagaatgctaacaaggctctggataaagctcgggccaaaaacagagacgtcctgcag
acggagaccagccagcagctctgctgccacaagtttgagaagatctccgagtctgccaag
caagaactcatcgatttcaagacgagacgagtggcggcattcaggaagaacctggtggag
ctggcagaactggagctcaaacatgcaaagggaaaccttcagctgctgcagagctgcgtg
agcgttctgaaaggtaccacttaa
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