Nematolebias whitei (Rio pearlfish): 119427471
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Entry
119427471 CDS
T08042
Symbol
brf1a
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit a
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119427471 (brf1a)
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
119427471 (brf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
119427471
NCBI-ProteinID:
XP_037551026
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All DBs
Position
21:29877121..29932384
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AA seq
681 aa
AA seq
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MSSRVCKACGGSDIDVDPARGDAVCMGCGSVLEDNIIVSEVEFVESGGGGSLAVGQFVSS
EGQKNPSFGDGHVSGLGSESRAKTLQNAKQHINTLGHQLQMSQHCLDTAFNFYKMALNKS
LTRGHKSAHIIAACIYLVCRTEGTPHMLLDLSDVLQVNVYVLGKTFLLLARELCINAPAI
DPCLYIPRFAQMLEFGEKNHDVSMTALRLVQRMKRDWMHTGRRPSGLCGAALLVAARFHD
FCRTMKEIINVVKVCEGTLRKRLNEFKDTPTSQLTIEEFMRVDLDQECDPPCFTAGLRKA
KLQQLETELKKKIHDVEDEIQEYQDEIDAELEGSRPKLRGVYAAYTKEDLKSEDLNSTPS
EVADEDSDEDDELRAIAKHFGKELSEISVEALIKLEKTRPEEEEEEEEEDAPQQKGPSLD
FILGTMPSSATLGLSKTFSSCKDEANDGATDGGELDLSGIDDAEIDEYLLSDNEIKVKTA
FWMAENADYLKEQKQKEAKIAEEKALGIYKEKRPKRPSKRRLPIRASSADEAIGKMLEQK
KISSKINYDVLKDLDTKPGSSPAPQTPRKEPAAVKTTGRNRNPALALLNLSTPLSTLGKR
LQPFITRQPNKKLAVEQAAVSSPQPAPAASPVSGLVVESGPVVYDDGAAEEEEDEDEPCV
SAMELLGGNDYGCDGDYDDGF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagggtgtgcaaggcatgcggcgggtcggacatcgacgtggacccggcccgc
ggcgacgccgtctgcatgggctgcggctcggttctggaggacaacatcatcgtgtccgag
gtggaattcgtggagtcgggaggaggcgggtcgctggctgttggacagtttgtgtcctca
gagggtcagaagaacccgtccttcggagatggacacgtctctggtctggggtccgagtct
cgagcaaagaccctccagaacgctaaacagcacatcaacactctgggccaccagctgcag
atgagccagcactgtctggacacggccttcaacttctacaagatggcgctcaacaaaagc
ctgacccgcgggcacaagtcggcgcacatcatcgccgcctgcatctacctggtctgccgc
acggagggaacgccacacatgctgctggacctcagtgacgttttacaggtgaacgtgtac
gtgttgggaaaaaccttcctcctgctggccagagaactctgcatcaacgccccggctata
gacccgtgtctgtacatcccccgcttcgcccagatgctggagttcggcgagaagaaccac
gacgtttccatgacggcgctgcggctggtccagaggatgaagcgggactggatgcacaca
ggaaggaggccttcaggactctgcggagcagctcttcttgtcgcagctcgtttccacgac
ttctgtcgcaccatgaaagaaatcatcaatgtcgttaaagtctgtgaaggcacgcttaga
aaaagactgaacgagttcaaggacactccgaccagccagctgacgatcgaggagttcatg
agggtcgatctggaccaggagtgcgacccgccgtgttttactgccgggctgaggaaggca
aaactccaacagctggagaccgagctgaagaagaagatccacgacgttgaagatgaaatc
caggagtaccaggatgagattgatgccgagctggagggcagccgacccaaactgagagga
gtctacgctgcctacactaaggaagaccttaaaagcgaggaccttaactccacgccatct
gaggtggcggatgaagactctgatgaagatgatgagctccgggccatagccaaacacttt
ggcaaagagctgtctgagatctcggtggaggccctgataaaactggagaaaacaagacca
gaggaggaggaggaggaggaggaggaggatgctccacagcagaaaggcccgtctctggat
ttcatcctgggaacgatgccctcatcggccactctgggcctctccaagaccttcagcagc
tgtaaggacgaggcgaatgatggtgccactgacggcggggagctggacctgagtgggatc
gacgacgcagagatcgatgagtatctgctgagcgacaatgaaattaaagtcaagacggct
ttctggatggctgaaaacgccgactacctcaaagagcagaaacaaaaagaagctaaaata
gctgaagagaaggcgcttgggatctacaaagaaaaacggccgaagcgaccttcaaagcga
cgcctcccgatcagagccagctccgccgatgaagccattgggaagatgctggagcaaaag
aagatctcctccaagatcaactacgacgtgctgaaggacctcgacaccaagcccggcagc
agcccagcgccccaaaccccgaggaaggagccagctgccgtcaagacgaccggacgcaac
cggaacccggctctggctctgctgaacctcagcacgccgcttagcactctgggtaaaagg
ttgcagccgttcatcaccagacaacccaacaagaagctggctgtcgagcaggcggcggtc
tccagcccacagccggcacctgcagcgtccccagtcagcgggttggtggtggagagtggg
ccagtggtctacgatgatggagctgctgaggaagaggaggatgaagatgagccttgtgtc
agcgccatggagctgctgggcggaaacgattacggctgtgatggagattacgacgatgga
ttctag
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