Nematolebias whitei (Rio pearlfish): 119427529
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Entry
119427529 CDS
T08042
Symbol
elavl1a
Name
(RefSeq) ELAV-like protein 1a isoform X1
KO
K13088
ELAV-like protein 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119427529 (elavl1a)
03041 Spliceosome [BR:
nwh03041
]
119427529 (elavl1a)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119427529 (elavl1a)
mRNA cycle factors
Stress granule specific factors
119427529 (elavl1a)
Spliceosome [BR:
nwh03041
]
Common components
Common spliceosomal components
General mRNP proteins
119427529 (elavl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_3
RRM_occluded
RRM_DEAH11
YqeY
Motif
Other DBs
NCBI-GeneID:
119427529
NCBI-ProteinID:
XP_037551085
LinkDB
All DBs
Position
21:complement(12804587..12824519)
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AA seq
343 aa
AA seq
DB search
MAVRQGHNKYLKEVYEMSNGYEDHMGGDEAKDAKTNLIVNYLPQSMSQDELRSLFNSIGE
VESAKLVRDKVAGHSLGYGFVNYLNPSDAERAISTLNGLRLQSKTIKVSYARPSSDIIKD
ANLYISGLPKSLSQKDVEDMFSRYGRIINSRVLADQSTGMTGVSRGVAFIRFDKRSEAEE
AVKNLNGQKPPGATEPMTVKFAANPNQLKNTQFISQLYHNQSRRFGGPLHHQAQRFRFSP
MGVDHMGGMGGVNVPGNSSGWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNK
CKGFGFVTMTNYEEAAMAIASLNGYRLGDKVLQVSFKTSKGHK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcgtcaaggacacaataagtacttaaaagaggtgtatgagatgtctaacggt
tatgaagaccacatgggaggggatgaggcgaaggatgccaagactaacctgatagtgaac
tacctgcctcaaagcatgtcgcaggatgagctgagaagtctcttcaacagcatcggagaa
gttgagtctgccaagctggttcgagataaagttgcaggccacagtttagggtacggattt
gttaactatcttaaccctagtgatgcagaaagagctatcagtactctcaatggactaagg
ctacagtccaaaactatcaaggtttcttatgcccgacccagctcagacataataaaggat
gccaacctgtatatcagcggcctgcccaagtccctgtcacagaaggatgtggaagatatg
ttttcacgttacggtcgtataattaattctcgagtactcgctgaccagtctacaggtatg
acaggtgtgtcccgcggcgtggcttttatccggtttgacaagcgatcggaggcggaggaa
gctgtcaaaaacctgaatggtcaaaaaccaccaggggccactgaacccatgacggtgaaa
tttgctgccaacccaaatcagctcaagaacacacagttcatttctcagctgtaccataac
cagtcccggcgctttggagggcccttacaccaccaggcacaacgatttcggttttcccca
atgggtgttgatcacatggggggcatgggaggtgtgaacgttcccgggaactcctccggc
tggtgcatcttcgtctacaatctgggtcaggatgcagacgagggcatcctgtggcagatg
tttggtcctttcggcgcggtcaccaacgtcaaggttatcagagatttcaacaccaacaag
tgcaaaggcttcggcttcgttacaatgacaaactacgaggaggcggccatggctatcgcc
agcctgaacgggtaccggctcggagataaagtactgcaagtgtcctttaagaccagcaag
ggccacaagtaa
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