Nematolebias whitei (Rio pearlfish): 119427640
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Entry
119427640 CDS
T08042
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03015
mRNA surveillance pathway
nwh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119427640
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
119427640
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nwh01009
]
119427640
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119427640
03036 Chromosome and associated proteins [BR:
nwh03036
]
119427640
Protein phosphatases and associated proteins [BR:
nwh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
119427640
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
119427640
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
119427640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrase_H2C2
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_1
P2R3B_EF-hand
RT_RNaseH_2
RT_RNaseH
Motif
Other DBs
NCBI-GeneID:
119427640
NCBI-ProteinID:
XP_037551206
LinkDB
All DBs
Position
21:5618257..5729447
Genome browser
AA seq
1334 aa
AA seq
DB search
MAAAYRVVVSSVSCYNSVVVDRRSHSQAVHYCSGPCGVLSQGLDCTVAHRGTCSELLVAS
DSVYNDFSISPIHSRNMITQQLSKHSKLCVTMDTIHNGCLERTSSSGNLSSGEDSPTWRG
KKTPSGAGSTGNMSCSVSLKDITEEAINLASGKLKEFSFDKLRLTSSSHVTFRKGRKVRP
DSFSRRSTDLDIIYSHISSNLTTNTTANSMTNGLAPSNDENLPPLVLGKGMGMEEAKLKG
SSGMLSANNKAGSGSTSTLSSMGSLNQSLNTVASLYCSTLGEENLIARLLEKTRAEAATG
GTGGEDIRACLDILLKCSEDLKKCTDIIKQCIKRKAGGNPEDGGASPDNVYRAVMTRLSS
YLKRLPLELEGSGSLGGSGLGGQGAPGSRHSDLAELVNTLHSIQQGPFSPIFGSEQPPRY
EDVVQSPPVPKTISQSSTPSLSLSSSVCSKSDFIYTKLIQSSAQFKGPPLTNGLQPSHAS
SLTQHTLSPPSVTCSSSSSSPTHSPSSLRNSPSPPDTHNPPASPMEALYIEEEADMEKTP
YHVLLQTHSPPRGVNTTSNNDETMVEQHLHLSQSNTCHNSSNNLPASSDYISSWAQTASL
TVLTPKAISRRNDDIDKLLIDLENLSQSMSHPRITELPLPVKTRKRVGGQGTNINESLTH
LKMTPFHIKNPSNHQSVNGLSSNTPLSIPPSQGQNSEHEGAGDEEDGALLLRILESIESF
AQELVDSGPGSTGSAERKCGKEREVMRLLQDTLTTAGRAETPESTNSPAVSTVPFKYTDI
DPAAKTKYTEENTPVVSLTTTSIPAVPGPDSNVAIESALKPTLDASPDLLSLPKPVLDNV
TEASAGESVPEASVPTSFLESTHLDGPSSVVSPEAPASVGIRAAETTKDNAITVDEPATM
EYGGTTLLIQQTPEVIRVQSKPEKKPGTPPPLPTTTTPAHTQLLPSPPPSPVIVTPTPPA
INIPRFYYPCGLPTLVPGTASADAVIAAIEMAFTEFEEEKSDIYEMGKIAKNYDIGNHEL
LAVKLALEEWRHWLEDVKPDALSRQFSPPEDTEQEPNILPSSCVVGSLTWSIEKDILEAQ
KTEPDPGTGVARMLALTKRHFWWPSMNEDIKNYVAACPTCARTSSNRIIERLFSGAVTRG
NAVQKEGRMSYAEFVWFLMSEEDKKNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCER
MESMGIEPLPFQDLLCQMLDLVKPESTGKITLSDLKRCRMAHIFFDTFFNLEKYLDHEQR
DPFAIQKDIDSESPEPSDWDKYASEEYEILVAEETANDQLHEGTFDDDYEAEELQVPGEI
SNQMEKLVISKLTA
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcctatcgtgtagttgtgagcagtgttagctgctacaacagtgtggtggtg
gaccgacgcagccattcccaagccgtgcactactgctctgggccatgtggggtgctgtcc
caaggcctagactgcactgttgcacatcgtggaacttgttctgagcttcttgttgcctct
gattcagtgtacaatgactttagcatctcacccatacactcccgaaacatgatcacacag
caactttctaagcatagtaaactttgtgttaccatggataccattcataatggttgtcta
gagaggacaagcagcagtggcaatttgtcttcaggggaggacagccccacatggcgtggt
aaaaagacccccagtggtgcaggatctactgggaacatgagctgctctgtgagccttaaa
gacattactgaagaagccattaacctggccagtggcaagctcaaagagttttcatttgac
aagctgcgcctgacctcctctagtcatgtcactttccgcaaaggtcgtaaggttcgccca
gactcttttagtcgtcggtccactgacctggacatcatctatagccacatcagctccaat
ctgacaacaaacacaacagctaacagcatgacgaatggcttggctccttctaatgatgag
aaccttccaccacttgtgctggggaaaggaatgggaatggaagaagcaaaactaaagggc
agctcaggcatgctctcagccaacaacaaagcgggtagtggctcaacaagcaccctttca
agtatggggtcactgaaccagagtctgaacacggtggcctccttgtactgcagcaccctt
ggagaggagaacctaatagcccgattgctggagaagacacgagcagaagcagccactgga
ggaacagggggggaggacattcgtgcatgtcttgacattctgcttaaatgttctgaagac
ctaaagaaatgcactgacatcatcaaacagtgcatcaaacgcaaagctggtggcaatcca
gaggatggaggagcaagtcctgacaatgtttatcgtgctgtcatgacccgacttagctct
tacctgaagagactgccactggaactagaagggagtggaagtttgggaggcagtggactg
ggaggtcagggagcacctggaagcagacacagtgatttggctgaactggtaaacaccctt
cactcaatccagcaaggacctttttctccgatttttggtagtgaacaacctcctcgctat
gaagatgtggtgcagtcacctccagttccaaagaccatttcacaatcttctactccttct
ttgtctttatcttcatctgtgtgttctaaatcagatttcatctacaccaaactaatccag
agttcagctcagtttaaaggtcctccactcacaaatggactacagccttcacatgcatct
tctctcactcaacatactctttctccaccatcagtcacatgttcttctagtagttcttct
cctacacactccccatcctcgcttcgaaactcaccaagcccacctgacacacacaatccc
ccagcatcccccatggaggctctttatattgaggaagaggcagatatggaaaagacacca
tatcatgtcttgctgcaaacacactctccacctagaggggtgaacactacatctaacaat
gatgagactatggtggagcaacacctgcacttgtcacagtctaatacatgccacaattct
tcaaataatttgccagccagctctgactacatttcctcttgggctcaaactgcctcacta
actgtcttaacacctaaagctatatcacgcaggaacgatgacattgataaactgctaatt
gacttggagaatctgtctcagagcatgagccaccccagaatcacagaacttcctcttcca
gttaaaaccaggaagcgagtgggaggccaagggactaacatcaatgagtctttaactcac
ctcaaaatgacaccgtttcatattaaaaatccatccaaccaccaaagcgttaatggcctt
agctccaacacgcccctgagtattcctccttcccaaggacagaacagtgagcatgaaggg
gctggagatgaagaagatggggcacttttgttaagaattcttgaaagcatcgagagtttt
gcccaagagctggtggattctgggccagggagtactggaagtgctgagaggaaatgcgga
aaggagcgggaggtgatgagattattgcaggatacactgaccactgctggtagggctgaa
actcctgagagtacaaactcaccagctgtttctactgttccctttaaatacacagacata
gacccggctgcaaagacaaaatacacagaggaaaacacacctgtggtttcacttacaaca
acatcaatacctgcagtacctggacctgactctaatgttgcaatagaatctgcacttaaa
cctacactagatgcctctcctgatcttctttctttgcctaaaccagtgctagataatgtt
acagaagcttctgcaggtgaatctgtccctgaagcatctgtacctacaagtttcctggaa
tcaacacatttggatggaccttcatctgtggtctcacctgaagccccggcttctgttggt
attcgagctgcagaaaccacaaaagataatgctattactgttgatgaacctgctactatg
gaatatggtggcacaacccttctcatccagcagactccagaggtgatcagggtccagtcc
aaaccagaaaagaaacctggaacacccccaccattgccaaccacaactactccagcccac
acacagcttttaccaagtcctcctccatctccagtgatagtcacccccactcctcctgcc
attaacattcccaggttctactacccctgtgggctccctaccctggttccaggtactgcc
agcgctgatgcagtcattgctgccatcgaaatggctttcaccgaatttgaggaggagaaa
tcagacatttatgaaatgggaaagatcgccaagaattacgacataggcaaccatgagctc
cttgccgtcaagttggccttggaggagtggcgacactggctcgaggatgtgaagcccgac
gccctgtctcgtcagttctcaccaccagaggacaccgaacaggaaccaaacattctaccc
tcatcctgtgtggttggttcgttgacctggtccattgaaaaggacatcttagaggcccag
aagaccgaacctgaccctgggacaggtgttgctcgtatgctagctctgactaagagacac
ttctggtggccctccatgaacgaagatataaagaattacgtagccgcttgccccacatgt
gccagaacgtcctcaaacagaatcattgaaaggctgttttccggggctgtcactcggggt
aatgctgtgcagaaagaaggccggatgagttatgctgagtttgtctggttcctcatgtct
gaggaagacaagaagaatcccaccagtatagagtactggttccgctgcatggatgtggat
ggagatggtgtcctatccatgtatgagttggaatatttctatgaagagcagtgtgagagg
atggaaagtatgggcatcgaacctctgcccttccaggatttgctctgccagatgcttgac
ctggtcaaacctgagagtacaggtaaaataaccctgagtgatctgaagcgctgccgcatg
gctcacattttctttgacaccttctttaatctggagaaatacctggaccacgaacaaaga
gatccatttgccattcaaaaggacattgacagtgaaagtcctgagccgtctgactgggat
aaatacgcctccgaggagtatgagatactggtggccgaagagacggcaaacgaccagcta
catgaagggacgtttgatgatgactatgaagcagaggagcttcaggtccctggagagatc
agtaatcaaatggaaaaactggtcatatcaaaattgacagcgtaa
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integrated database retrieval system
