Nematolebias whitei (Rio pearlfish): 119427709
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Entry
119427709 CDS
T08042
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03022
Basal transcription factors
nwh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119427709 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
119427709 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119427709 (mnat1)
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119427709 (mnat1)
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119427709 (mnat1)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119427709 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-UDP
zf-C3HC4
TRAF3_RING
Xol-1_N
zf-RING_2
zf-P11
Motif
Other DBs
NCBI-GeneID:
119427709
NCBI-ProteinID:
XP_037551273
LinkDB
All DBs
Position
21:complement(16746955..16788895)
Genome browser
AA seq
311 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFARGSGSCVQCDTPLRKSNFRV
QLFEDPTIDKEVEIRKKVMKIYNKREFDFSSLREYNDYLEQVEDIVYNLTNNIDVENTKL
RMEQYQKENKDIIQKNKAKLTREQEELEELLLLEQQSNEQRRLEVLQEEQRQLQVKRKNK
QALLDELEQSQLPATILLAKHKVRAAQLETEIEQQKQNVKPTSIFSTGIQMRQNVSLQPV
PRIEEVLYHYKPIQIETYGPPVPELEQLGRFGYLNHVRAALPQDTAGGYTSALACYRAIQ
DAFSGLFPPKG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccaggggtgtccgaggtgcaaaacgaccaaatacaggaacccgtcgctgaag
ctgatggtgaatgtctgcggacacacgctatgcgagaactgcgtggagatgctgtttgcg
cgcggctcaggcagctgcgttcagtgtgacacaccgctcaggaagagcaactttcgcgtg
cagctcttcgaagacccaaccatcgacaaagaggtggagatccgcaagaaggtgatgaaa
atttacaacaagagagaatttgacttctccagcctgagagaatataacgattatctggag
caggtcgaggacattgtgtataacctcacaaacaacattgatgtggaaaacaccaagctg
aggatggagcaataccagaaagaaaacaaagacatcatccagaaaaataaggccaagctt
acacgagagcaggaggagctggaggagctgcttctcctggaacagcagagcaacgagcag
cggaggctggaggtgctgcaggaggagcagaggcagctgcaggtcaagaggaagaacaaa
caggctctgctggatgaactggagcagtctcagcttcctgccaccatcttactcgccaag
cacaaagttcgtgctgcccagctggagacggagatcgagcagcagaaacagaacgtgaag
cctaccagtatattttcaactggaatccaaatgcggcagaatgtgtctcttcagcctgtg
cccaggatagaggaagtgctgtaccactacaaacctattcaaattgaaacctacgggcct
cctgtgcctgaactggagcagctgggaagatttgggtatctgaatcacgtgagggccgcc
ttgcctcaggacacagctggaggatacacgtcagctctggcgtgctaccgagccatccag
gatgctttcagtgggctgtttcctccaaaaggctga
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