Nematolebias whitei (Rio pearlfish): 119427739
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Entry
119427739 CDS
T08042
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119427739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119427739
03021 Transcription machinery [BR:
nwh03021
]
119427739
03036 Chromosome and associated proteins [BR:
nwh03036
]
119427739
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Helix-turn-helix
ARID
119427739
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119427739
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119427739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
119427739
NCBI-ProteinID:
XP_037551305
LinkDB
All DBs
Position
21:complement(20118383..20135521)
Genome browser
AA seq
1332 aa
AA seq
DB search
MSPDGKLKLDVKDEGGPNNEPHKPKQLQDGYMNNNSSSVSQPATPGSNLPMPPSLSPSPA
SLSSYHGDDSDSISSPPWPLKTPSSPKVNPNSSIGGERASRLYELGAEPERRAWVERYLT
FMEERGTPVSQLPAVGKKPLDLWKLYMAVREIGGLAMVNKNKKWRELSGTLNVGTSSSSA
STLKKQYIQFLFAYECKMERGEEPPADSNSGSSVTEGDNRKQVKIQPPSPANSGGSLQGP
QTPQSSGSSSTAEVVGDLKPPTPATTPLGQVTPLPHNRSSVSVQDPFSEVSDPAFQKRAT
SLPPSAPYQQGLSMPDMMMRMQYDAKDPFAGMRKMAGADPYIPSQIPSGGMPDMYGRPPS
GLSMSQRSQYPYGPGYDRRPDHMMGMEGTMGPPGSQNNMGHSNSEGSMYSPSRYPSQQRH
DGYGQQYSSMPYGMHPSGMYPQQQGYKRQLDGMYGPPPKRHESDIYAMQYTNQQPDMYNH
YGGGYTGPEHRPIQGQFPYAYHRDRMPPSGQSQHSMMGAGHTPNHAADGPNMWPSRTDLG
YPYHNRQGPPSQMTPYGSICRDDMDGRAGQDQWHRQSPYMSSSGGMPPLSSRQPLSYSSS
PSMANHLPRAPSPGPFHRSIDPRMSPSKAPFMSPMKMPKPGLPMMGSQSSGPIGQFPPNL
RRDLNYPPGSVEATLPILKPRRKLNSKDCGTPEAWRVMMSLKSGLLAESTWALDTINILL
YDDSTVASFNLSQLPGFLELIVEYFRRCLIEIFGILEEFEVGTVAHKNYLDMTSVQTEQN
IPTPNQETDSTSLTGPESSSVAETREEQTGGTEENAPPVSAQPAEVCGKKGDLDVGAKMD
EKNNKKAEEERESESKKPCSELPPAGLETKPKQASKYDKLPIKIEQKDDLIEDLTERLGY
ITEFTSGLLHWQAGGGDSTAHIQTHFEPRSEAPGRDNKKTKHKDEQESKAENQKRLKHIT
ATIDDVLCARVDALSHAHPARSLPSYPFRVHPDGEDDHITLLEDEPHCLDEAPLTTASAW
QDSLSKRCLCVSNIVRSLSFIPGNDMEMSRHPALVLLLGRLLLLKHVHPERNRLAQSFQR
DEQQERELSSSKDEWWWECLSLLRENAMVTLANIAGHLDLSSYSDTICLPILDGLLHWMV
CPSAEAQDPFPSAAPHSQLTPQRLALECLCKLSIQDGNVDLLLATPPFSRQEKLFAILVR
CMGQRKVQVYREMAVAVLSHLAQGDPTAARAIALQKGSVGNLVAFLEDGVSVAQYQQNPH
SLLHMGHSHMDPPSVNMMCRAAKGLLAMAKVEENKTEFVLYESRLLDISISSVLNAGVVA
IVCQVLFHLGKL
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgagcccagatggaaaactaaagttggacgtcaaagatgaaggcggccctaacaatgag
ccacacaaaccaaagcagcttcaggatggttacatgaacaacaacagcagcagtgtgtcc
cagccagccactccaggcagcaacctgcccatgcccccctccctctcccccagccccgcc
agcctgtcgtcataccatggggatgacagcgacagcatcagcagcccaccttggcctctc
aagaccccttccagccctaaagtcaacccaaactcctccatcggcggcgagagagccagc
cgactgtacgagctgggtgcagagcccgagagacgagcttgggtggagcggtacctgacc
ttcatggaggagcggggcacacctgtttcgcagcttccagctgtgggcaagaaaccgctg
gacctgtggaagctctacatggctgttcgggagataggaggcctcgccatggtaaataag
aacaagaagtggcgcgagctgtccggcaccctgaacgtcggtacgtccagcagctctgcc
agcacgctaaagaagcagtacatccagttcctgttcgcctacgagtgcaagatggagaga
ggagaggagccgccagcggacagcaacagtggcagcagcgtgaccgaaggcgacaacagg
aagcaggtcaagatccagccgccttcacctgctaattcaggcggctctctccaaggtcca
cagacgccccagtcttctggcagcagctcaacagcagaagtagtaggcgacctgaagccg
cccacacctgccaccaccccgctgggacaagtcactccactgccccacaacaggagcagt
gtgagcgtgcaggaccccttctcggaggtgagcgacccggcctttcagaagcgggctacc
agcctgcccccctcagctccctaccagcagggcctcagcatgcctgacatgatgatgagg
atgcagtacgacgccaaggaccccttcgcagggatgaggaagatggcaggagctgatcct
tacatcccgagccagattcccagtggtggtatgccggacatgtacggtcggccgccgtcg
ggcctaagcatgagtcaaaggtcacagtatccatacgggccaggctatgacagaagacct
gatcatatgatggggatggaagggactatgggccccccaggaagtcaaaataacatggga
cactccaacagtgaaggcagcatgtactccccaagcaggtacccatcacagcagagacat
gatggttatggccagcagtattccagcatgccatacgggatgcatccatctgggatgtat
ccgcagcagcagggctacaaacgacaactggatggaatgtacggccccccacccaagagg
catgagagtgacatctacgccatgcagtacaccaaccagcagccagacatgtacaaccac
tatggtggtggctacacaggccctgagcacagaccgatccagggacaatttccctacgcc
taccaccgtgaccgtatgcccccatcgggccagagccagcacagtatgatgggtgcgggc
cacactcctaaccatgctgctgacgggcctaacatgtggccttcaagaacagacctcggc
tatccttaccacaacagacaaggaccgccatcacaaatgacgccgtatggctccatttgc
agagacgacatggacggtcgggcagggcaggaccagtggcatcgccagtctccctacatg
tcatcatcaggtggcatgccccccctgtcttcacgccaaccattgtcttattccagctcc
ccatccatggccaatcatctgcctcgagcccccagcccagggcccttccatcgctcaatt
gaccctcgaatgtcccccagtaaagccccattcatgtcacccatgaagatgcctaagcct
gggctgcctatgatgggctcacagagcagtgggcccattggtcagtttcctccaaacctg
aggagagacctcaattaccccccagggtcagtggaagccaccttgccgattctgaagccg
cggcgtaagctcaactctaaggactgtggaacacctgaagcctggcgtgtgatgatgtct
ctaaagtctggcctgctggcagagagcacctgggctttagacaccatcaacatcctgctg
tacgacgacagcaccgtggcctccttcaacctgtcccagttgcctggattcctcgagtta
attgtggagtacttccgccggtgcctgatcgagatttttggcatcttggaagaatttgag
gttgggacagtggctcataagaactacttagatatgacttctgttcagacggaacagaat
atccccacccctaatcaggaaacagactctacctccctaactggacccgagtcatcgtca
gtagcagaaactcgggaggagcagacgggaggcacagaggagaacgctccgcccgtctct
gcacagccagctgaggtgtgcggcaaaaagggcgatttagatgtaggtgcgaaaatggac
gagaagaacaacaaaaaagcagaagaagagcgggaaagtgaaagtaagaagccgtgttcg
gaactgccccctgctggtttggaaactaaacccaaacaagccagcaagtacgataagctc
cccataaagattgagcagaaagatgatctgatcgaagacctgaccgagcgtctaggttac
atcactgagtttaccagcgggctgctgcactggcaggcaggtggaggcgactccaccgcg
cacattcagacgcactttgaaccgcggagtgaagcgcccggcagggacaataaaaagacg
aaacacaaggacgaacaagagagcaaggcggagaatcagaaacgtctgaagcatatcaca
gctactattgatgatgttttgtgcgccagggtggacgccctctcacatgcccaccctgca
cgctctctgccatcttacccgttcagggtgcatccagatggggaggatgatcatatcacc
cttctggaggacgagccccactgcctggacgaggctccgctcactacagcctccgcctgg
caggactcgctgtccaagcgatgcctctgtgtctccaacattgtccggagtctgtccttt
atccccgggaacgacatggagatgtcacgccaccccgcactggttcttcttctaggcagg
ctgcttctgctgaagcacgtgcacccagagaggaacaggctggcccagagctttcagaga
gacgagcagcaggagcgggagctgtcgagtagcaaagacgagtggtggtgggagtgtctg
agtttgctcagggagaacgccatggtcacactcgccaacatcgcaggtcacctggatctt
tcttcttattcggacactatttgccttcctatcctggacggcctgctccactggatggtt
tgcccttcggctgaagcccaggaccccttcccatcagcagcgccacactcccagctcact
ccccagaggctggctctggagtgcctctgcaaactcagcatccaggacggtaacgtagac
ctgctgctggccactccgccttttagcagacaagagaaactttttgcaatcttggtgcgc
tgcatgggtcagaggaaggtgcaggtgtacagggagatggcggtggccgtcctctcccac
ctggcgcagggagacccgacagcggcacgagccatcgccttgcagaaaggcagcgtgggt
aatttggttgccttcttggaagatggcgtgagcgtggcacaataccagcagaacccgcac
agcttgctgcacatgggacactcccacatggacccacccagtgtaaacatgatgtgcaga
gcagctaaaggtctgctggccatggctaaggtggaagagaacaagacagagtttgtactg
tatgaaagcagattattagacatctccatttcctcggtgctcaacgcaggagtggtggcg
attgtctgccaagttctgttccacttagggaaattatga
DBGET
integrated database retrieval system
