Nematolebias whitei (Rio pearlfish): 119427761 Help Entry 119427761         CDS       T08042                                  Symbol vps39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism nwh  Nematolebias whitei (Rio pearlfish) Pathway nwh04140   Autophagy - animal nwh04142   Lysosome biogenesis nwh04148   Efferocytosis nwh05132   Salmonella infection Brite KEGG Orthology (KO) [BR:nwh00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome biogenesis     119427761 (vps39)    04140 Autophagy - animal     119427761 (vps39)    04148 Efferocytosis     119427761 (vps39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     119427761 (vps39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:nwh04131]     119427761 (vps39) Membrane trafficking [BR:nwh04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     119427761 (vps39) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 VPS18_solenoid_2nd Clathrin Beta-prop_RIG_2nd WD40_like Motif Other DBs NCBI-GeneID:  119427761 NCBI-ProteinID:  XP_037551327 LinkDB All DBs Position 21:complement(12851059..12876468) Genome browser AA seq 876 aa AA seqDB search MHEAYEPVPILEKLPLQIDCFAAWEDWLLVGTKPGHLLLYRIKKDAATNRFEVTLEKSNK NFSKKIQQLYVVSQYKILVSLLENNIHVHDLLTFQQITVVSKAKGATLFACDLQQTGPGE ERLRMCVAVKKKLQLYYWKDREFHELQGDLAVPDIPKSMAWCENSICVGFKRDYYLIRMD GRGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGTCTQKCALNWTDIPITME HQPPYIIAVLPRYVEIRTFEPRLLVQSVELQRPRFITSAGPNVLYVASNHFVWRLVPVSI ASQIRQLLQDKEFELALQLAKMKDDSDGDKKQQIHRIQNLYAFNLFCQKRFDDSMQVFAK LGTDPTHVIGLYPDLLPSDYRKQLQYPNPLPTLSSAELERAHLALIDYLTQKRSHLVKQL NDSDPSTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEES EYVLKKAHKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGVENLG IIFEFCPWVLKTCPEDGLKIFTEDLPEVEMLPRDQVLQFLKKGFEELAIPYLEHIIYVWD EQGPEFHNVLIQLYLGRVQHLMKLYLKSLPEGVPAVPAGQEKGELGEFRNKLLSFLEIST SYEPARLISDFPFDGLLEERALLLGRMGKHEQALFIYVHVLKDTRMAEEYCHRHYNSLVE GNKDVYLSLLRMYLSPPDAHCLGPIKMELSEPQANLQAALQVLELHHSKLNTTKAINLLP ANTQIREIRVFLESVLEEKAQRKRCNQVLKSLLQAEFLRVQEERIFHQQIKCVITEEKTC RVCKKKIGNSAFARYPNGVVVHYFCCKDRSVCPTEQ NT seq 2631 nt NT seq  +upstreamnt  +downstreamnt atgcacgaagcttacgagcctgtgcccattttagaaaagcttcctcttcagatcgactgt tttgctgcttgggaggactggctgcttgttgggacaaagcccggacatctcctcctctac agaataaagaaagatgcggccaccaaccggtttgaagtgactttagaaaaatccaacaaa aacttttcaaagaaaatacagcagctttacgtcgtctcgcagtacaaaattcttgtcagt cttctggagaacaacatccacgtccatgacctgctgacttttcagcagatcactgtggtg tctaaagccaaaggagccactctctttgcttgtgacttacagcaaaccggcccaggagag gaaaggctcagaatgtgtgtggcagtgaaaaagaaactccagctgtattactggaaggac agagagtttcatgagctgcagggtgacttggctgtgcctgatatccccaagtccatggct tggtgtgaaaattccatatgtgtgggtttcaaacgagactattacctcattcggatggat ggccgtggcagcattaaggagctcttccccactgggaagcagttggaacctctggttgcc ccactggctgatgggaaggtggctgtagggcaggatgacctgactgtggtactgaatgaa gaaggaacttgcacccagaaatgcgccctgaactggacagacatccccattactatggag caccagcctccctacatcatcgcagttcttccgaggtacgtggagatccggacctttgag cccagactgttggtgcagagtgtggagctgcagagaccacgcttcatcacctcagcagga cctaatgttttgtatgtagccagcaaccactttgtttggcgcctggtgcccgtgtcgata gccagccagatccggcagctccttcaggacaaagagtttgagctggctcttcagctggcg aagatgaaggatgactcggatggtgataagaagcagcagatacatcgcatccagaatctg tacgcctttaatctgttttgccagaagagatttgatgattctatgcaggtgtttgccaaa cttggcacagatcccacacatgtgatcggactttacccagacttactcccatcagattat cgcaaacagctgcagtaccccaaccctctgcctacgttatccagcgccgagctggagagg gctcatctcgctctcatcgattaccttactcagaaacgcagccatcttgtgaaacaactg aacgactccgacccttcaacaacatctcctctcatggagggaacacccaccatcaaaagt cgcaagaaactccttcagatcattgatactacactgctgaaatgttacctgcataccaac gtggccctcgtctcccctctccttcgtttggagaacaaccactgccacatcgaggagagc gagtatgttctgaagaaggcgcacaagtacagcgagctcattattctctatgaaaagaaa ggcctgcaccagaaggctctgcaggtgctgctggaccagtcgaccaaggccaactctcca ctgaagggtcatgagcgaacagtgcagtacctccaaagacttggagtggagaatctgggc ataatctttgagttttgtccctgggtgttgaagacttgtcctgaagatggcttgaagatc ttcaccgaagatctgcctgaggtggagatgttgcccagagaccaggtgctgcagttcctg aaaaagggcttcgaggagcttgcgatcccgtatttagagcacatcatttatgtgtgggat gaacagggccccgagtttcataatgtgctaattcagctctatttaggcagggttcagcac ctcatgaaactctacctcaaatcactgccagaaggggttcctgctgttcctgcaggccag gagaaaggggaactgggagagttcagaaacaaactcttgtcttttctggagatttccacc agctatgaacctgccagactcatcagtgactttccatttgatgggttgctggaggaacga gctctgcttctggggcgcatgggtaaacacgagcaggcgctcttcatctatgtccacgtc ctgaaagacacgcgcatggctgaagaatactgtcaccgacattacaacagtctggttgaa ggaaataaagatgtgtatctgtctctgctgaggatgtacctgtcacctcctgatgcccac tgcttgggccccatcaagatggagctttctgagcctcaggccaacctgcaggcggctctg caggtcctggagctgcaccacagtaaactgaacaccaccaaggccatcaatctgctccca gcaaacactcaaatccgagaaatccgggtgttcttggagagcgtcctggaggagaaggct cagagaaaacgctgcaaccaggtgctgaagagtctgctgcaggcggagttcctcagggtg caggaggagcgaatcttccatcagcagattaaatgtgtcattacagaagaaaagacctgc agagtctgtaaaaagaaaataggaaacagtgcatttgccaggtatcctaatggtgtggtg gtacattatttctgctgcaaagatcgcagtgtttgtcccacagagcagtaa

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