Nematolebias whitei (Rio pearlfish): 119427839
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Entry
119427839 CDS
T08042
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119427839 (msh4)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Meiosis-specific proteins
Others
119427839 (msh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
AAA_29
AAA_23
ATPase_2
Motif
Other DBs
NCBI-GeneID:
119427839
NCBI-ProteinID:
XP_037551421
LinkDB
All DBs
Position
21:17577412..17584748
Genome browser
AA seq
914 aa
AA seq
DB search
MYHSSTEEVTMSGDASECGPKRSSSLADSHSRRLNEADTSSCPMSLSSVWSRQSSDGSSS
KSSHGPSLPVMTSGQCPASSRIVRTPSSVLMSTSDSSSLHCHRETPRFRRTPGSTGPTGT
SSSSGSLLSGASVIVAVVEGRGLARGEIGMVSFNLKCPELVLSQFADTGTYAKVVTKIHI
LMPVEILMPDTASEKGKGTKLYKLITENFPGVTFTAVQRKYFNERKGLEYIQQLCAPEFN
TVLMEVQAKYYCLASAAALLKYLEFLQNSVYASKSLKVSFKGSEETAMIDSASAANLELV
INNRDHRSEHTLLGVLNHTKTPGGARRLRSNILEPLIDVDTINIRLDAIQELLQNEDLFF
GLKNAIGHFLDIDRLLSVLVQIPKQQTVKAAEAKITHVIQLKHTLDLVPQLRAVLKDCST
ALLKAYSTALEDNRFDMILQQIKTVINCDTTYLKGSLNMRTQKCYAVRPNINEFLDIARR
AYTEIVDDIAGLVNQMGEKYGLPMRTSFSTARGFFIQMKLEGVVLPEDKLPPEFIKVTKH
KNNYGFTTADLMKMNGRCDEALREIFHMSYVVICQLLGTIHEHIHCLYKLSDAVSMLDML
LSLANACTISDYVRPEFTDTLAIKQGRHPILERMARQQPVSNNAYISEGSNFVIITGPNM
SGKSTYLKQVALCQIMAQIGSFVPAEYASFRVADQIFTRIGVDDDFETNSSTFMLEMKEV
SYIIHNASDRSLIIIDELGRGTSAEEGIGICHSVCEFLLRLKAFTLFATHFLELCQLESL
YPNVENQHMEVQHTRRADTGAEQVVYTHLLSRGCSERHYGLKAAEMTALPPGVIQEAKVI
ASQVSQQLLAKRQTDPETQRQRAVYRLATRLLQTARNSRLDPESLRMYLKGLKRQYEAEL
QAAGTPESLNTEEE
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtatcacagcagcacggaggaggtaacgatgagcggtgacgcctctgaatgtggacca
aaacggagctcgtccttagcggacagtcacagcaggaggctgaacgaagccgacacttct
tcttgtcccatgtcactttcctctgtttggtcgaggcaaagctcagatggaagcagctcc
aaatcaagtcatggcccatcattaccagtaatgacctcaggtcagtgtcccgccagctcc
aggattgtgaggacgccgtcatcagtcctcatgtccacctcagacagctcctctcttcac
tgccacagagaaacaccaagattcagaaggactccggggtctacggggcccacaggaaca
agcagctcatctgggtccttactctctggagcctcggtgatcgtggcagtagttgaaggc
cgtggtttggccaggggagagataggcatggtcagtttcaacttgaaatgtccagagctt
gtactttctcagtttgcagacacaggaacatatgccaaggttgtaaccaagattcacatc
ttgatgccagtggaaatattgatgccagacacagccagtgaaaaagggaaaggaactaag
ctgtacaagctgatcactgagaactttcctggtgtaacttttactgcagtccaacgaaag
tattttaatgagaggaagggactggagtatatacagcagctatgtgctccagagtttaac
actgtccttatggaagtacaagcaaagtactattgcctagcatcagcagctgctttgcta
aaatacctagaatttcttcagaactctgtgtatgcttctaagtcacttaaagtaagcttt
aaggggagtgaggagacggctatgattgactcagcatctgccgccaacttggagttagtg
attaataacagagatcacaggagtgagcatactcttttaggggtactcaatcacacaaaa
actcctgggggagccaggagactgcgctctaatattctggagcctctgatcgatgtggac
accatcaacatacgcttggatgccatacaagagctgctccagaacgaggatctcttcttt
gggctgaagaatgctataggtcatttccttgacattgaccggctgctttctgttcttgtt
caaatcccaaagcaacaaacagttaaagctgctgaagctaagattacacatgtcattcag
ctgaagcatacactggatctggtgccacaattaagggcagtgttgaaggactgtagcaca
gctctactgaaggcgtacagcacagcactggaagacaacagatttgacatgatcctccag
cagatcaagacagtgataaactgtgacaccacatatttgaaaggcagcctgaacatgcgc
acacagaagtgttacgccgtgcggcctaacatcaacgagttcctcgacatcgcccgcaga
gcttacactgagatagttgacgacattgcagggcttgtgaaccagatgggggagaaatat
ggcttgccaatgcgcaccagctttagtacagctcgaggattcttcatccagatgaagctt
gaaggcgtcgttttacctgaggacaaactccccccagagttcatcaaggttaccaagcac
aagaacaactatggcttcaccacggcagacttgatgaagatgaatggacgctgtgatgaa
gccctgagggagatttttcacatgtcctacgtggtgatatgtcaactgcttggcaccatc
catgagcacatccactgcctctataaactctctgatgctgtgtccatgttggacatgtta
ctgtcgctggctaatgcgtgcacaatctcagactatgttcgtcctgagtttacagacact
ctagccatcaagcaaggtcgtcaccccattttggagcgcatggctcgacagcagcccgtg
tcaaacaatgcctacatttctgagggcagcaactttgtcatcataacagggcccaacatg
agtggcaaatccacctacctcaaacaggtggcgctgtgtcagatcatggctcagatcggt
tcttttgtccccgctgaatacgcctccttccgtgttgctgatcagatcttcaccagaatt
ggtgtggatgatgatttcgaaactaactcctctacttttatgctggaaatgaaagaggtc
tcttatataatccacaatgcgagtgacaggtccttgatcatcattgatgagttggggcgt
ggcacgagtgctgaggagggcatcggcatctgtcactcagtctgtgagttcctccttcgc
cttaaggcgttcactctgtttgccacgcacttcctggagctgtgtcagctggagtctctc
taccctaacgtggagaaccagcacatggaggttcagcacacgcgccgtgctgacaccggt
gcagagcaagtggtgtatacgcatctgctgagccgaggatgctctgaaaggcactatggt
ttgaaagcagcagaaatgaccgcacttcctccaggtgtaatccaagaggcaaaggttatc
gcgtctcaagtcagccagcagcttttggccaaacgtcaaactgatccagaaactcagaga
cagagagcggtgtaccgcctggccactcgcctcctgcagactgccagaaactcaagactt
gaccctgaaagcctgcggatgtatctgaagggactgaagaggcagtatgaggctgagctg
caagctgcagggacgccagagagcttaaacacagaggaggagtga
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