Nematolebias whitei (Rio pearlfish): 119427855
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Entry
119427855 CDS
T08042
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119427855 (wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nwh03009
]
119427855 (wdr43)
Ribosome biogenesis [BR:
nwh03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119427855 (wdr43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp12
WD40
ANAPC4_WD40
WD40_2
Utp21
Paf1
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
119427855
NCBI-ProteinID:
XP_037551437
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Position
21:complement(23884714..23900655)
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AA seq
649 aa
AA seq
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MAADDGISSLQLPCVFSPKSRQYLAVCAQDGRLRIWNTDSKTLHQEYVPSAHLSATCTCL
SWGPCRTAKEGPQRKKRKSEAAQVEKVDLLAMGTAAGTVLIYSTVKGALHCTLDGGHSGG
VNCVHWHPEDSLLYSGSDDTNIVEWDLQTGKTRSKWKADRSAVTSLCVSPDGKLLLSAGK
IIKMWDLDTKEVYRKFTGHSTAVTTLCFATTRPPDGNGLYFVSGAAHDRLLSVWQVREDG
KDKNSVVSFTLTDEPQNFDLVKSSSKEEAVRLAVVCKDGQLHLFEHFLNGPFKKPLSPSC
TVQMSDTRESPMQIPLLAAALEVDPRSVVLAYGSHLQPVMERVEINTAERHICLTRDIKA
NLSISMETTVSKVKTPIVNAKSKVLVPGLPGHQAPLKVGSQGTEKRKKDADTKEMSIAER
LREIDLSVVSSQKGAAKVEASLQTDNFAVLLVQGLESNDAATLNKVLQTNKASLIKTTVS
RLPLSAVLPFVEELTKRLQGHPTMAIQMLRWLKAVLVHHTSYLASLPDLNTQLGVLYHMI
ESRVKMFHKLTKLHGKLNLLMTQVATNDSSNRLTDVDHTAKLVYEEESSDEDEASGDEAL
PDEESDHWEEDEAMDEDEEDKDDEDSDSRTEPKANGDEDMEHENESEEE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacgatggcatttcttcgctgcagctcccctgcgttttttcacccaaatca
cgacagtacttagccgtgtgtgcccaggatggcagacttcgcatctggaacacggacagt
aaaacacttcatcaagaatatgtgccttcagctcatctgagtgccacttgtacgtgttta
tcctggggaccatgccgaactgcgaaggagggacctcagaggaagaagaggaaatcagag
gcagcacaggtggagaaggttgacctgttggcaatgggcacagcagctggtactgtcctc
atctacagtacagtgaaaggagctctccactgtaccctggatggaggccatagtggagga
gtgaactgtgtccattggcatcctgaagacagcttattatacagcggttcagatgatacg
aacattgtagagtgggacctgcagacaggcaagactcggagtaaatggaaagcggatcgt
tcagctgtgaccagtctgtgtgtgagtcctgatggtaaactgctgctttcagctggaaag
ataatcaagatgtgggacttggacaccaaagaggtttacaggaaattcacaggccattca
acggctgtgacaaccctctgcttcgccaccacacgacctcctgacggcaacggcctctat
ttcgtctctggagctgcacacgaccgactcctcagcgtttggcaagtacgagaagatgga
aaagacaaaaactcagtggtttccttcacgctgaccgacgagccacaaaacttcgacctt
gtcaaatccagcagcaaagaagaggcagtcaggctggcagtggtgtgtaaagatggacag
ttacatctattcgagcactttttaaatgggccgtttaagaagcctttgtcaccttcgtgt
acggtgcagatgtccgacacaagggaatccccgatgcagatcccactgctggcagcagca
ctcgaagtcgatccgcgctctgtggtgctggcatatggcagccatctacagccggtgatg
gagagagtggaaatcaacacggcagagagacacatttgcttgacccgagacataaaggcc
aacttgtccatctcgatggagaccaccgtctccaaggtgaaaactccaatcgtcaatgcc
aaaagcaaagtgttggttccaggacttcctgggcatcaagctcctctcaaggtgggctca
caaggaacggaaaagaggaaaaaagacgcagacaccaaagagatgtcaatagccgagcga
cttcgtgaaatagatctgtctgttgtctccagtcagaaaggagctgctaaagtcgaggcc
tcgttacaaacagacaactttgcagttctactggtgcagggcctggagagtaacgacgct
gccactctaaataaagttttacagactaacaaagcatcattaataaaaacgacggtttct
cgattgccactctctgctgttctgccgttcgttgaagagctcacgaagaggctccaaggg
catcctacaatggcaattcaaatgttgcggtggctcaaggctgtcctcgtgcatcacaca
tcatacctggcatcgctgcccgacctgaatacccagctgggagtcctttatcacatgatc
gagagccgagtgaaaatgttccacaaactgacaaagctgcacgggaaactcaatctccta
atgacacaggtggcgacaaatgacagcagcaacaggctcactgatgttgaccacacagct
aaactggtgtatgaagaggaatcatctgacgaagatgaggcctctggtgatgaagctctt
cctgatgaagaatctgatcactgggaagaggacgaggcgatggatgaagacgaggaggat
aaagacgatgaagattccgacagcagaacggaacccaaagcaaacggagatgaagacatg
gaacatgaaaacgagagcgaagaagaataa
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