Nematolebias whitei (Rio pearlfish): 119427958
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Entry
119427958 CDS
T08042
Symbol
pus7l
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nwh03016
]
119427958 (pus7l)
Enzymes [BR:
nwh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
119427958 (pus7l)
Transfer RNA biogenesis [BR:
nwh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
119427958 (pus7l)
Prokaryotic type
119427958 (pus7l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
TyeA
Motif
Other DBs
NCBI-GeneID:
119427958
NCBI-ProteinID:
XP_037551528
LinkDB
All DBs
Position
22:complement(9637627..9640919)
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AA seq
672 aa
AA seq
DB search
MKQGDEAGSVPAYFLSNHEGFLGSIKNFTEDFVVSEIDSNGQNVRTAQALQRPGCAFSEE
DNVELKENAHYSVPQDTDGSSEWGPDTPLPSLGSFDLDVILGQSVSEDLEQFVLTLREKK
QVGLELSLGFFSDKHQRANVHRAVRHRFPFLMTVTIQPEIRVREDPDYRELARLVKEDEA
EDFFRFIDAKVRGSSYTFGPDDNKEHRTAVHHFLNRRFGKLVETKSFSNQGMTAISVRLR
DHGKPKKRTAEERKEEDLYTAFTLCKENLETLEAISYMAAALGVLPSDFTYAGTKDKRAI
TFQSMVVKKVSPQRLKEKAAEFEKRGMRLSRIRSVGEPLKLGRLQGNHFDLVVRNLRPHG
PVDEHGSGADVHARLAELVEEAVENVKRRGFVNYYGPQRFGSGQSVPSDRVGLALLKENM
VSAVHLFFTPDDGDDPQNLAKKHFLQTDNAKEALAMMPLSKPRERLMLRALNRYGGGPDG
CVQAWLSLPHSMRVFYPHAYCSRVWNEAVAHRLSTMGHCVRQGDLVWAQTGQNQTEDTGG
TSSRIHVVTYEDEQAGVYTLGQVLLPMPGNTVKYPENAMGTWYQEQLARDGLSDCRFRVN
SLKLNVPGCYRPLLAAPRNFSYRLQRAAMEGGGGAAGEMKQSSDSPYLTLNLDLDSSCYA
TICLREIMKCDP
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagggcgatgaggctggaagcgtccctgcgtacttcctgtcaaaccatgaagga
tttcttggaagcatcaaaaacttcactgaggactttgttgtgagtgagatcgacagcaat
gggcaaaacgtcagaacagcacaagccttgcagaggccaggctgcgccttctcggaggaa
gacaacgtggagttgaaggagaatgctcactattcagtcccacaggacactgatggctcc
tcggagtgggggccggacacccctctgcctagtttagggagttttgatttagatgtgatt
ttaggtcagtcggtgagtgaagatctcgagcagtttgtgttgacgctaagagaaaaaaag
caagttggcctggagctgtccttgggcttcttctcagacaaacaccagcgagccaacgtc
cacagggctgtgaggcaccgcttccccttcctcatgacggtcaccattcaacctgagatc
agggtcagggaagacccggactacagggagcttgcccggctggttaaagaggacgaagcg
gaggacttctttaggttcatcgacgccaaagtgcgaggctcgtcctatacgtttggacct
gatgacaataaggagcacaggacagcagtccatcacttcctgaaccgaaggtttgggaag
ctggtggagacgaaaagcttcagcaaccaggggatgacggcaatctcggttaggctgagg
gatcacggcaagccaaagaagaggactgcagaagagcgcaaagaagaagacctttacaca
gccttcactctgtgtaaggagaacctggagactctggaggccatcagctacatggcagct
gctctcggagtcctgccgtccgatttcacctacgccgggaccaaagataagagagccatc
accttccagtccatggtggtgaagaaggtctcgcctcaacggctgaaagagaaggctgca
gaatttgagaagagggggatgcgtctgtctcggatccgctccgtcggggagcctctgaag
ctgggacggctgcagggaaatcactttgacctggtggtccgcaacctcagaccgcacggg
cccgttgacgagcacggttcaggtgcagacgtgcacgctcgtctagcagagctggtggag
gaggcggtagagaacgttaagaggagaggtttcgtcaactactatggaccgcagaggttt
gggagtggacagagcgttccgtctgaccgagtcggactagctctgctgaaagagaacatg
gttagtgctgtgcatctgtttttcaccccggatgatggcgatgatcctcagaatctcgca
aagaaacacttcctccaaaccgataatgctaaggaggcccttgcgatgatgccgttgtct
aaacccagagagcgtctgatgctccgggctctgaacagatacggtggcggcccagatggt
tgcgtccaggcgtggcttagtttgccccacagtatgagagttttctaccctcacgcctac
tgcagcagggtgtggaacgaggctgtggcacacaggctgtctacgatgggtcactgtgtg
agacaaggagacctggtgtgggcacagacgggtcagaaccaaactgaggacactggtgga
accagctctcggatccatgtggtgacatacgaggacgaacaagcaggagtatacacactc
ggacaagtgttgctaccgatgccaggaaacaccgtgaaatatccagaaaatgccatgggg
acttggtaccaggagcagctggccagagatggactgtccgactgtcgcttcagggtcaac
agcctcaaactgaacgtgcctggctgctaccgccctctgctggcagcgccgcggaacttc
agctaccggctacagagagcagccatggagggtggaggaggagcagcaggagaaatgaag
cagagctcagactctccttatcttaccttaaacttagatctggactcatcctgctacgct
accatctgcctccgggagatcatgaaatgtgacccttaa
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