Nematolebias whitei (Rio pearlfish): 119428192
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Entry
119428192 CDS
T08042
Symbol
shank3b
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
SH3_2
Ank_4
SAM_2
Ank_3
Ank_5
PDZ_6
PDZ
SH3_9
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
119428192
NCBI-ProteinID:
XP_037551765
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All DBs
Position
22:2162124..2201293
Genome browser
AA seq
1705 aa
AA seq
DB search
MPLSPTADTKHDRPRQQAVTNGNPTGSAVARDDDADDSPPGNSVVVRIGIPDLQQTKCLR
LDPELPVWTSKQRVLVTLTQSLSDVLNYGLFQPAFNGRAGKFLDEERLLKEYPLPPITPI
PYLEFRYKRRVYTQTYVDDKQLAKLHTKANLKRFMEHVHQKNVEKVSKWLEKGLDPNFHD
ADNGECPLTLAVQLEDSGELIKVLRSGGAHLDFRTRDGITALHRAVLCRNSASLTTLLDL
GASPDYKDSRGLTPLYHSAMVGGAPYCCELLLQDHATIGITDENGWQEIHQACRYGNVQH
LEHLLFYGADMSSQNASGNTALHLCALYNQDSCARVLLFRGVNKDIKNYNNQTAFQVAII
AGNFDLAEIIKIHKSSDVAVPFRETPSYTKRRRVGATRTAAGNGLSSPRSLIRSASDNAL
ESPASSPGPSLQSLETHHDTHTHSLRRHTRRLSPSEVAHVETSPPSSPPPTPQMRKRRLY
SAVPGRTFIATRSHVPQGPGEIQLHRGERVKVLSIGEGGFWEGSVKGRTGWFPADCVEEV
QMRQYDPRLETREDRTKRLFRHYTVGSYDNYTSYSDYVIEEKTAMLQKRESEGFGFVLRG
AKAETPIEEFAPTPAFPALQYLESVDQGGVAWRAGLRTGDFLIEVNGTDVVKVGHRQVVS
LIRQGGSRLLMKVMSVSRKSENLIRKKAPPPPKRAPSTSLTLRSKSMTADLEEIARRRRY
EKLDEMLAGGQQEVVLRTRPSDDFRAATVKQRPTSRRITQAEINSLFERQGLVPPSAPEK
STMALPRGMSRTKSFGTPDDNRISALINESRFPRSSSLTDGSIPPPPQTAPPPPPSASST
SSLFLLDSGPPPSFLPPPPPGQGEGLTRSSFKPGAEPRLQELSDSRSHTHAERQRKARSM
IILQDTPPPPLQLDAHAAGHALHTATQTSTLSIHSTSPALGHSPLSRLRGRPIENPYANV
GQQAPPTKPQRRKSPLLKQLPVEEQGHDLFKLDRGGPSSPSRAELYQQQVLSERARVQGR
RSSLFLSVEGAGSENQPPLLLTQSHSMDDLGELPPPAPVLSPSPTPHTFLHPLTGKPLDP
SSPLALALAARERALTARTPSPEPRTKHTSASTTPVPTPAASPESRHKRTPYTTPQSSPE
PRSKRTSPQTSPEQRTKHTTPQTSPELRHKRITPPLFPDGQVERPETEGGVTSPAAPSPE
RWRPSPLPALANESHSALIDRRRSLTVGSSEEEGGAYTVTLPPALLSSSDEETREELRRI
GLVTPPPAFASPPALPPPPSLALMPRRGGEGGGEGGPESQGRRGDEEEGGDDRLHDSSLS
PSSLPPSITLASPPVPTSPSSPPATHPSPSSTVTSPSALKPRLRSPIGRGRSALRDPLLK
QSSDSELLPCAASSSSPSSPLCSSPTSGRQPRYLFQRRSKLWGGGDDERRGVSPEDGGGR
PAALGGQVSGSAVDLTSRSASALELSGRAGSGLDLANRLQLLNKDSHSLGEEPSPLDPGR
RSPVGGARLFSSLGELHTISQRGYGSSYTVRPGSRYPVTRRSPSPSPSPSDRSVGLPTSP
ASCSERPDLSSGRGLTILKSSSLSLPSEPKEVRFVMRSASARTRSRSPSPSPHASPCPSP
VLSGPLLALRPWRQRPLSLWNKYDVGDWLESLGLAEHRQRFQEHEIEGSHLPSLSKEDYM
ELGVTRLGHRINIERALRQLLDSST
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgagtccgaccgctgacaccaaacatgatcgcccgcggcaacaggcggttact
aacggcaacccaacaggctctgctgtcgccagggatgacgacgccgacgactcgcctcct
ggaaacagcgtggtggtccgcatcgggatcccggacctgcagcagacgaagtgtttgcgg
ttggacccagagttaccagtttggaccagtaagcagagggttctggtgacgttgactcag
tctctgtcggatgttttgaactatggtctcttccagccggcgttcaacggccgagccgga
aagtttctggacgaggagcggctgctgaaggagtaccctctgccccccatcacccccatc
ccgtacctggagtttcgttataagaggagagtttacacgcagacatacgtagacgacaaa
cagctggcgaagcttcacaccaaggccaatctgaagcgatttatggaacatgtccatcag
aagaacgtggagaaagtttccaaatggttggagaaaggtctggatccaaacttccacgac
gcagacaacggagagtgtcctctgaccctggccgtgcagctggaggacagcggtgagctc
attaaagtcctccgcagcggaggagcccacctggacttcaggaccagagacgggatcacg
gctctgcaccgggccgtcctgtgcaggaacagcgcctcgctcacgactctgctggacctt
ggagcatctccggactacaaggacagccgaggcctgactccgctgtaccactctgccatg
gtgggcggagccccgtactgctgcgagctgctgctgcaggaccacgccaccatcgggatc
actgatgagaatgggtggcaggaaatccaccaggcctgtcgctatggcaacgtgcagcat
ctggagcacctgctgttctacggcgctgacatgagttcccagaatgcctcaggaaacacc
gcgctgcacctctgcgccctgtacaaccaggacagctgcgcccgggttctgctgttcaga
ggagtaaacaaagacatcaagaactacaacaaccagacggcctttcaggtggcgatcatt
gcggggaactttgatctcgctgaaatcatcaagatccacaaatcatctgatgttgcagtt
cccttcagagaaaccccgtcctacaccaagcgccggcgggtcggcgccaccagaaccgca
gcaggaaatggactgtcctcgccccgctccctcattcgctccgccagcgacaacgccctg
gagagccccgcctcctcgcccggcccctccctgcagagcctggagacgcatcacgacacg
cacacgcactctctgagacgacacacgcgccgcctcagcccgagcgaggtggctcacgtg
gagaccagccccccctcctcacctccccccaccccgcagatgaggaagaggcggctgtac
agtgcggtgccgggacggaccttcatcgccacccggtcccacgtcccccaggggcccgga
gagatccagctgcaccgaggagagcgggtcaaagtcctgtccatcggcgagggggggttc
tgggagggcagcgttaaaggcagaaccggctggtttcctgcagactgcgtggaggaggtc
cagatgagacagtacgacccgcgacttgagacgagggaggacagaaccaagagactcttc
agacattacacggtcgggtcgtacgacaactacacctcctacagcgactacgtgatcgag
gagaaaacggccatgctgcagaagagagagagcgaaggcttcggcttcgtcctcagagga
gctaaagccgagacccccattgaagagttcgcccccacacctgcgtttcctgcccttcag
tacctggagtctgtggatcaggggggcgtggcctggagggcggggctacggaccggagac
ttcctcatagaggtgaacgggaccgacgtggtgaaggtgggtcaccggcaggtcgtctct
ctcatccgacaaggaggaagtcgtctgctgatgaaagtcatgtccgtctcccgaaaatca
gaaaacctgatcaggaagaaagctccgccccctcccaaacgagcgcccagcacatcactg
acgctccggtccaagtccatgacagccgatctggaggagatagccaggaggcggcgctac
gagaaactggacgagatgctggctggaggccaacaggaagttgttctgaggacccgccca
tcagacgacttcagagcggcgacggtcaaacagaggccgacgagccgacgcatcacgcag
gccgagattaactccctgtttgagcgtcagggtctggtgcccccctccgccccagagaag
agcaccatggctttacccagagggatgtccagaaccaagagctttggcacaccggatgac
aaccggatctcagctctgatcaacgagagtcggtttccacggagctcctcgctgacggac
ggctccatcccacctcctcctcagacagccccgcccccgcctccctctgcctcctccacc
tcctcgctcttcctcctcgactcgggccctcctccatccttccttccccctcctcccccg
ggtcaaggggagggactgacccgctccagcttcaagccgggggcggagccgaggctgcag
gagctctcagattccagaagccacacccacgccgagcggcagcggaaagcgaggtccatg
atcatcttgcaggacacacccccaccgccgctgcagctcgacgcccacgccgctggccac
gccctgcacaccgccacgcagacctccacgctgtccatccacagcacaagccccgccctc
ggacactcgccactgtcacgcctccggggacgaccaatagaaaacccttacgctaacgtg
ggtcagcaggctccgcccaccaaaccccaaaggaggaagtcgcctctgttgaaacaactt
cctgttgaggagcagggtcacgatctgttcaagttggaccggggcggaccttcgagcccc
agcagggcggagctgtaccagcagcaggtgctctccgagcgcgcccgggttcagggccgc
cgctcctccctcttcctgtcggtggagggggcggggtcagagaaccagccgccgcttctg
ctgacccagagccactcgatggacgacctcggagagctcccccctccggcccccgtcctg
tcgccctcacccacgcctcacaccttcctgcacccgctgacgggcaaaccgctagatccg
tcgtctccactcgccttagccctcgctgcacgagaacgagcgctcacggcccgaacgccg
agtcctgaaccccgaaccaagcacacctcggcctccaccacgcctgttcccaccccggcg
gccagtccagagtccagacacaagcgcaccccttacaccacccctcagagcagccccgag
ccacggtccaagcgcacctcccctcagacgagcccggagcagcgaaccaaacacacgact
ccacagaccagcccggagctgagacacaaacgcatcacgccacctctgtttcctgacgga
caggtggagcgacctgagacagagggaggagtcacctcacctgctgccccctcccctgaa
cgctggagaccctcccccctgccagcactggccaatgagagccattcagctctgatagac
agacggagaagccttacagtgggcagctcagaggaggagggcggggcttacactgtgacc
ctcccacctgccctgctgtcatccagcgatgaggaaaccagggaggagctacgcaggatc
ggtctggtgactcctccccctgcctttgccagcccccctgcacttcctcctcctccttct
ctcgccttgatgccacggcgaggaggagaggggggaggagaaggcggtcctgagtctcag
gggagacggggagatgaggaagaaggaggagacgatcgtctccatgacagctccttgtct
cccagttcccttcccccctccattactctggcctcccctcctgttcccacctctccctcc
tccccaccagccactcacccgtctccctcctccactgtcacttcaccgtctgccctgaaa
ccccgcctccgatctccgattggtcggggccgctcagcgctccgggacccattactgaag
caatcgtccgacagcgagctcctcccctgcgctgcgtcctcttcctccccctcgtcccca
ctctgctcctcccccaccagcggccggcagccacggtacctgttccaaaggaggtccaag
ctgtgggggggcggggacgatgagcggcggggcgtgagcccggaggacgggggaggacgt
cccgcagcgctgggaggacaggtgtctgggtcagctgtggacctgacgagccgctcggcg
tctgctctggagctgagcggccgggccgggtccggactggatctggccaaccgactccag
ctgctcaacaaagacagccactctctgggggaggagccaagtcccctggacccggggcgg
aggtcgcctgtgggaggagccaggttgttctccagcctcggggaactccacaccatctcc
cagagaggatacgggtccagctacacggtccgaccaggaagtcgctaccccgtcacccgc
cggagcccctccccttccccctccccctccgacaggtccgtggggctccccacctccccg
gcctcctgctctgaacgcccggacctgagctcgggtcgaggtctgaccatcctgaagtcg
tccagcctcagcctcccctcggaaccgaaggaggtccgttttgtaatgaggagcgccagt
gcacggaccagatcccgctctccctcgccttcaccccacgcctccccctgcccctccccg
gtgctcagcgggcccctgctggccctgcggccgtggaggcagcggcccctcagcctgtgg
aataaatacgacgtcggtgattggttggagagtttgggcctggccgaacaccgccagcgc
ttccaggagcacgagatcgaaggctcccacctcccctccctctccaaggaggactacatg
gagctgggcgtcacccgcctgggtcaccggatcaacatcgagagggctctcagacagctg
ctggatagctccacttga
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integrated database retrieval system
