Nematolebias whitei (Rio pearlfish): 119428217
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Entry
119428217 CDS
T08042
Symbol
dhx57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
nwh03012
]
119428217 (dhx57)
Enzymes [BR:
nwh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119428217 (dhx57)
Translation factors [BR:
nwh03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119428217 (dhx57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
RWD
HA2_C
DEAD
HA2_N
nSTAND3
AAA_22
zf-CCCH_4
AAA_19
NB-ARC
zf_CCCH_4
NPHP3_N
AAA_14
Rad17
Viral_helicase1
AAA_16
Motif
Other DBs
NCBI-GeneID:
119428217
NCBI-ProteinID:
XP_037551794
LinkDB
All DBs
Position
22:7442329..7458267
Genome browser
AA seq
1398 aa
AA seq
DB search
MSARRGGKPNRGGSRSSKPKGGGAGYLDFDDDFSLSFGPPRSSRAGKGRGRDGGGGKGRN
DRDRDDRRRAESHRMPLPRSLANTRLPTKSADCIRSETSSMPMQKIFMTNENQEQLKELL
RELQTQDFDEPSEESGLDDSEEEEEFDELDHREEGQFWATNDEPVERAESPAYCKDSEDE
RPTPEPVISLFAIGKLCRYGFDRERSKKALEFGGGDFGATLEQLLLQVYSERYGQKAVCP
DDLQRVPVDECLSQRQEEALALAAIYGDRFKECIANTVWTVSLDLPFLSEKAPQKVGKAR
NGGEAAPVRGVCRFFLKDQGCRLKDKCRFRHELPGKERSGAGSSDLKGPSHPGISSYSPP
EYQLEVRFPKGNRYPHQAPIVAFSTNDESVGAAGRLSVTEKLFEEALAAAKCSEPVVYTL
ITLCEDELSMKELLAVGHHKYSSPPPVVGLPQPLPAVAKSKSVEGRSNYTNSRRAAPPTT
RTPADLEEAEERDEDVRPVPVKCESYVHLKKMANKHNQKLDVLQENKKLCREFKKKQSSR
RFRSMLEQRKNLPAWQEKENILDALERCQVLVISGMTGCGKTTQIPQFILDASLSGSAEQ
VANILCTQPRRISAISVAQRVAQERAESLGNSVGYQIRLESVWSSATRLLYCTTGVLLRR
LEGEPDLRGVTHVIVDEVHERTEESDFLLLVLKDLIIQRPDLKIILMSATLNANLFSEYF
YSCPSIHIPGRTFPVDQFFLEDAIAKTGYVIEDGSPYRRSGKLNASSSNGQGGKGGSRNM
VDDLGDDVWNFMSFCKKDLVKDSIPDQQLSLQDLTVRYKNTKKSVLLTMAAMDLDKINMD
LVESLLEWIVEGKHDYPPGAVLVFMPGLAEIKMLYEQLQSNRMFNNRGASRCVVYPLHST
LSNEEQQAVFSRPPEGVTKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDASKSMESLE
DTWVSRANALQRKGRAGRVASGLCFHLFTSHCFRHQLSEQQLPEIQRVPLEQLCLRIKIL
DLFSEQLLDSVFSRLIEPPAEGSLDTARQHLQDMGALTADEKLTPLGYHLACLPVDVRIG
KLMLFGAIFRCLDPALTIAASLAFKSPFVSPWGKQEEANERKRDFAVSNSDHLALLQAYE
GWCTAAKTSSHAGFRFCRDNFLSSRSLQEISSLKRQFAELLSDIGFVKKGLRARVIERMS
SKGADGVLEATGPEANLNSKNMQLMSAMLCAALYPNVVQVRAPQASYKMTSKGAVKMPQK
ASELQFVTKSDGCVHIHPSSVNFKVRHYDSPYLLYHEKVKTSRVFIRDCSMVSVYPLVLL
GGGQVNVKLGGGGFVISLDDGWIQFAAASHQVAELVKELRWELDQLLEDKIKNPSMDLCS
CPRGSRIIRMIVHLISTQ
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaagaagaggtgggaaaccaaacagaggagggtctagatctagcaaaccaaag
ggaggaggagcaggctacttggatttcgatgatgatttcagcctttcttttggacctccc
cgttccagcagagctggtaaaggacgagggagagatggtggaggaggtaaaggacgtaac
gatcgagacagagatgatagaaggcgagccgaaagtcacagaatgcctctgccaaggtcc
ctggcaaacaccagacttcccactaagtctgccgactgcatcaggtcagagacgagcagc
atgcccatgcagaagatcttcatgaccaatgagaaccaggaacagctcaaggagttactg
cgggaactacagacgcaagattttgacgagccctctgaggaatctggcttagatgattca
gaggaagaggaggaatttgatgaactagatcaccgtgaggaaggccagttttgggctact
aatgacgagcctgtggagagagcagaaagccccgcttactgcaaggactctgaagacgag
cgtcccactcctgaacctgttatctccttatttgccattggaaaactctgcagatatggg
tttgacagggagcgtagcaaaaaggcactggagtttggaggaggcgattttggggcaacc
ttggaacagctcctccttcaggtttacagcgaacgctacggacagaaagcagtgtgcccc
gatgacctccagcgggttccagtggacgagtgtttaagccagaggcaggaggaagctctt
gccctcgctgctatttatggagaccgctttaaggagtgcatagccaacacggtttggact
gtatccctggatcttccgttcctttctgaaaaggctccgcagaaggtaggaaaagctcga
aacggaggggaagctgcgcctgttcggggagtctgcagattcttcctgaaagatcaaggc
tgccgcttaaaagacaaatgcaggttcagacatgaactcccaggaaaagagaggtcgggg
gctggttcctcggacctgaaaggcccgagccatccgggcatcagcagctattctcctccc
gagtaccagctggaggttcgcttccccaaaggaaaccgttacccccatcaggcaccgatt
gtcgccttcagcaccaacgatgagtcagtcggagctgcagggagactcagcgtcaccgag
aagttattcgaagaggctctggctgcggcgaaatgcagcgagcccgttgtttacactctg
ataaccttatgtgaggatgaactcagcatgaaggagctgctggctgtcggtcaccacaag
tacagctcgccaccacctgtagtgggacttccgcagcctttacccgctgtggcgaagagt
aagagcgtggaaggccggagtaattacacaaacagcaggagggctgctccgcccaccacc
cgcacacctgcagatctggaggaggccgaggagcgggacgaggacgtcagacccgtccca
gttaagtgcgaaagttacgtccatctgaagaagatggcgaacaagcacaatcagaaactg
gacgttttgcaggagaacaaaaagctgtgcagagaattcaagaagaaacagtcttccaga
cgcttcaggtccatgctggagcagaggaagaacctcccggcttggcaggaaaaagagaac
attctggacgcgttggagcggtgccaggtgctggtgatcagtgggatgactgggtgcggt
aagacgactcagattcctcagttcattctggacgcctcgctgagcggctctgcggagcag
gtggccaacatcctgtgcactcagcctcgccgcatttctgccatatccgtggctcagagg
gttgcacaggagcgtgccgagagcctgggcaactccgtgggctaccagatccgtctggag
agcgtctggtcgtcagccaccaggctgctgtactgcaccaccggcgtgctgctcaggaga
ctggagggcgagcccgacctcagaggcgtcacgcacgtcatcgtggacgaggtgcacgag
cgaacggaggagagtgacttcctgctgttggtgctgaaggacttgatcatccaaagacca
gacttgaagatcattttgatgagtgccactcttaatgccaacctcttctctgagtacttc
tactcctgtccgtctatccacataccaggacggacctttcctgttgaccagttttttctt
gaggatgccatcgctaaaaccggctacgtcatcgaggacggcagcccctacaggcgctcg
gggaaactaaatgcgtcttcttcgaacggacaaggaggcaaaggagggtccaggaacatg
gtggacgacttgggcgacgacgtttggaacttcatgtctttctgtaagaaggacttggtt
aaagactcgatcccagaccagcagctcagcctgcaggacctcacggtccgatacaaaaac
accaagaagtctgttcttctgaccatggctgccatggacctggacaaaatcaacatggac
ctggtggagagcctgctggagtggatcgtagagggaaagcacgactatccaccaggagct
gtgctggtgttcatgccaggcctcgctgagattaaaatgctttacgagcagctgcagtcc
aacaggatgttcaacaacagaggagcgtccaggtgtgtggtgtaccccctccactccacc
ctgtccaacgaggagcagcaggcagttttcagccgtcctcctgagggcgtcaccaagatc
atcatctccaccaacatcgccgagacctcggtgaccatcgacgacgtggtgtatgtcatc
gactctggcaagatgaaggaaaagaggtatgatgcgtcgaagagcatggagagcctggag
gacacgtgggtttctcgggccaacgcgctgcagaggaaggggcgagccggacgcgtggct
tcagggctctgcttccacctcttcaccagccactgcttccgacaccagctgtccgagcag
cagctgccagagatccagagggtgcctctggagcagctctgcctccgaatcaagatcctg
gacttgttctccgagcagctgctggactctgtcttctctcggctcatcgagccgccggcc
gaagggagcttggacacggcccggcagcacctgcaggacatgggggctctgacggcggac
gagaagctgaccccgctgggctaccacctggcctgcctgcccgtcgacgtgcgcatcgga
aaactcatgctgttcggcgccatcttccgctgcctcgaccccgcgctcaccatcgccgcc
agcctcgccttcaaatcaccgtttgtgtctccgtggggcaagcaagaggaggccaacgag
aggaaacgggactttgccgtgtccaacagtgaccatctggctttgctgcaggcgtacgag
ggttggtgcaccgctgcgaagaccagtagccacgctggcttccgcttctgcagggacaac
ttcctgtcgtcgcgcagtctgcaggagatctccagcctgaagcggcagtttgctgagctg
ctgtctgacatcggcttcgttaaaaaaggactgagagccagggttattgaacggatgtcc
tcaaagggcgcagatggtgttttggaggctactggaccagaggccaacctaaactccaaa
aacatgcagctgatgtccgccatgctgtgtgcagctctctatcctaacgtggtgcaggtt
cgagctcctcaggcgagttataagatgaccagcaaaggggcggtgaagatgccgcagaaa
gccagcgagctgcagtttgtgaccaaaagcgacggctgcgtccacattcacccctcgtct
gtcaacttcaaggttcgccactacgacagcccctacctgctttatcacgagaaggtgaag
acgagccgcgtcttcatcagggactgcagcatggtgtccgtctacccactggtgctgctg
ggaggaggtcaggtcaacgtgaagctggggggaggagggtttgtcatctcgctggatgac
ggatggatccaatttgccgcagcttcacatcaggtggctgagctggtgaaggagctgcgc
tgggagctggaccagctgctggaggataaaatcaagaacccgagcatggacctgtgcagc
tgcccccgcggctcccgcatcatccgcatgatcgtgcacctcatcagcacgcagtag
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integrated database retrieval system
