Nematolebias whitei (Rio pearlfish): 119428230
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Entry
119428230 CDS
T08042
Symbol
cacna2d4a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04010
MAPK signaling pathway
nwh04260
Cardiac muscle contraction
nwh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119428230 (cacna2d4a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
119428230 (cacna2d4a)
04261 Adrenergic signaling in cardiomyocytes
119428230 (cacna2d4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119428230 (cacna2d4a)
Ion channels [BR:
nwh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119428230 (cacna2d4a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA_3
VWA
dCache_1
VWA_2
MCP-like_PDC_1
CobT_C
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
119428230
NCBI-ProteinID:
XP_037551809
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Position
22:complement(11818530..11923287)
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AA seq
1157 aa
AA seq
DB search
MQVAAAARISHWRTGKGGNAIKSDQSGPHKKRLMMLMWIILSSSLFLVVDGQMKISPETV
QQWAESFGKELAALSFRYSGAKLLQKKYKDVEGTVKIEEVNGEVLVKKFAAEMEEMLRRK
MESVKRIAEAAEDADLSHEYNETLEFDYYNSLLINSVDEEGNPVPLGGEFPLDKNEHYNK
LPVNIQQSNIQVPTNVYNRDPDILNGVYMSEALDDVFMENSQKDPTLTWQYFGSSTGFFR
LYPGIQWIPDENGVVTFDCRNRNWYIQAATSPKDVIIVVDVSGSMKGLRLTIAKHTINTI
LDTLGENDFVNIIAYSDYVRYLEPCFQGILVQADLDNREHFKLLVDEIHVKGEGKVKNAM
KESFKVLNEAATLGQGSLCNQVIMLVTDGAMEDFKDVFEEFNWPERRVRVFTYLIGREMT
FAENVKWIACNNKGYYTHVSTLADVQENVMEYLHVLSRPMVINHDHDIIWTEAYMDSVLF
NTQAQSLLLMTSVAMPVFSKKEETLSHGILLGVVGTDVALRELMRLATRYKLGIHGYAFL
ITNNGYILSHPELRPLYKEGQKLKPKPNYNSVDLAEVEWEDTEEKLRTAMVKGQTGTMFL
DVRSSVDKGRRVIFLRNDYFYTVINETPFSLGIVLSRGYGQYIFTGNVSVEEGLHDLLTP
DLNIANEWTYCETDLNPAHHKLSQLQAIVKYLTGKEANLKCDELLLQQALFDAVVTAPME
AYWTALMLNTSGMHDGIETAFLGTRSGLMRAVKYAGIEKRVGKSFLTSTDKENMFTLDHF
PVWYRRAAEFPAGQFLYYMPRQDTRDVFRDYEADYSGTMSAEEVEEDEEEEGRNHSKMSV
APSAGRILIASTAVTVTVGKKNAIAGAVGVQMTLEVIESKFWAIAAQPNDTDCSTVEGIC
PLRCDKFDIDCYVIDNNGFVLISKEQSDAGRFFGEADNSVMSTLIRMGMFKRVSLFDYQA
MCKMSSHSVSSARPILSPFYSLVSTFKWVLSNVLLFLLEFNMCSLWHTEHFADAKPSFSG
SYVPKKRGNALQPCDTEYPSFVYEPSVKETNSIIKCGRCQKMFVVQQIPESNLLMLVVQG
DCDCSKQFPPINLEPMEVKYNASVKCDRMRFQKIRRRPESCHSYHSQENADDCGGASFIH
LSASLLLVCVSFAALAS
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttgctgctgctgcacggataagccactggcgtacgggaaaaggcgggaatgcc
attaaatcagaccaaagtgggccacacaaaaagaggctgatgatgctgatgtggattatc
ctctccagctcactcttcctggtggtggatgggcagatgaagatctcaccagaaactgtg
cagcaatgggctgagagcttcggaaaagagttagctgctttgtccttcagatactctgga
gctaaacttttacagaagaaatacaaggacgtcgaaggcacagtaaagatagaggaagtg
aatggtgaagtcctggttaagaagtttgcagcggaaatggaagagatgctccggagaaaa
atggagtctgtaaagaggatagcagaagcagcagaagatgcagatctctcccatgagtac
aatgaaacgctagagtttgattactataactccctgttgatcaactctgtggatgaagaa
gggaatccagttccccttggtggagaattccccttggacaaaaatgaacattacaacaaa
ctgccagtcaacatacaacaaagcaacatacaagttcccacaaatgtttataaccgagat
ccagatattctgaacggggtctacatgtctgaggctctggatgatgtttttatggagaac
tctcaaaaagacccaactctcacctggcagtacttcggcagctccacaggcttcttcaga
ctctacccaggaattcagtggattccagatgaaaatggtgtggtcacttttgactgcaga
aacagaaactggtatatacaggcagccacttctcctaaagatgtgatcatcgtagtagat
gtcagtggcagcatgaagggcctcagactgacgatagccaaacacaccattaataccatc
ctagacacattgggagaaaatgactttgtcaacatcatcgcttacagtgattatgttcgt
tacctggagccctgtttccaaggcattctagtccaagctgatctggataacagagagcac
tttaagcttttggtggatgaaattcatgtcaaaggagagggcaaagtgaaaaatgcaatg
aaagaatctttcaaggtccttaacgaggctgctacactgggacagggcagtctgtgtaac
caggtcatcatgctggttactgacggtgccatggaggacttcaaggatgtttttgaagag
tttaactggccagaacgacgggttcgggtgttcacatatctcatcggacgtgagatgaca
tttgctgaaaatgtcaaatggattgcgtgcaacaacaagggctactacacacatgtatct
acactggcagatgttcaggaaaatgttatggagtacctccatgtcctaagccgaccgatg
gtgatcaaccatgaccatgatatcatctggacagaggcctatatggacagtgtgctgttc
aacacacaggcacagagtttgctcctgatgacttcagtagccatgccagtgttcagtaaa
aaggaagaaactttatcccatgggatcttgctcggagtggtaggaacagacgtagccttg
agagaactgatgagattagcaacaagatacaagcttggtatccatggttacgcctttctc
atcaccaataatggctacatcctgtctcatccagaacttcgacctctgtataaagaagga
cagaagctcaaacccaaacccaactacaacagtgttgatctggcagaagtggaatgggaa
gacactgaggaaaaactgaggactgctatggtcaaaggacaaactggaacaatgttctta
gacgtcagatcttcagtggataaaggaagaagagtgatctttttgagaaatgattacttt
tacactgttatcaacgagacaccgttcagtttaggaatcgtgttaagcaggggatatgga
cagtatatcttcacaggaaatgtctcagttgaggaaggtcttcacgacttattgactcca
gatctgaacatagccaatgagtggacctactgtgaaaccgatctcaacccagctcatcat
aaactctcccagctgcaggcgattgtgaaatacctcacaggcaaagaagcaaatctgaaa
tgtgatgagttgctgctgcaacaagctctctttgatgctgtggttactgcgccaatggaa
gcttactggaccgccctgatgctcaacacatctggtatgcatgatggtattgagaccgct
tttttggggacccgttcaggcttgatgagagccgtgaagtacgctggtattgagaaaaga
gttggaaagtctttcctgacctccacagacaaggagaatatgttcacactggatcatttc
ccagtgtggtaccgcagagcagctgagttcccagctggacagtttttgtactacatgccc
agacaggacacgagagatgtattcagagactatgaagctgactatagtggcaccatgagt
gccgaagaggtggaggaggatgaggaagaggagggtagaaatcattctaaaatgtctgtt
gctccatcagcaggaaggatcctgattgcctccactgctgtcactgtgacggtgggcaaa
aaaaatgccatcgctggagctgttggggttcagatgactctggaggtgattgagtccaaa
ttttgggccatcgcagctcagccaaacgacacagattgctccactgtggaagggatatgt
cctcttcgctgtgacaaatttgacattgactgctacgtgattgacaataatggttttgtc
ctaatttctaaagagcagagtgatgcagggaggttcttcggcgaggctgacaactcggtg
atgtccacgttgatcagaatgggcatgttcaagagagtttccttgtttgactatcaggcc
atgtgtaagatgagctcacactctgtcagcagcgctcgaccaattctcagccctttctac
agtttggtttccaccttcaagtgggtcctctccaacgtcctgctgtttctattagagttc
aatatgtgtagcttgtggcacactgaacactttgctgacgccaagccatccttcagtggc
tcttacgtaccaaagaaaagagggaacgccttgcagccgtgtgacaccgagtaccccagc
tttgtttacgagccgtcagtgaaagagaccaacagcattattaagtgtggacgatgccag
aagatgtttgtagtgcaacaaataccagaaagcaacctgctgatgctggtggtgcaagga
gactgcgactgctccaaacaattcccccccatcaacttggagcccatggaagtcaagtat
aacgcctcggtgaagtgtgaccggatgaggtttcagaagattcgtagacgccctgagtcc
tgccattcttatcactcacaggagaatgctgatgactgtggaggagcatcttttatacat
ctctcagcctctcttctactcgtctgtgtctcatttgctgcgctggcttcctga
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