Nematolebias whitei (Rio pearlfish): 119428245
Help
Entry
119428245 CDS
T08042
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119428245 (mkrn1)
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119428245 (mkrn1)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119428245 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf_CCCH_4
zf-CCCH
zf-CCCH_2
zf-CCCH_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
119428245
NCBI-ProteinID:
XP_037551829
LinkDB
All DBs
Position
22:complement(692449..712306)
Genome browser
AA seq
431 aa
AA seq
DB search
MAEAAAASSAASSVTGGWTKHVTCRYFMHGLCKEGDNCRYSHNLSKSKPAAMICKFFQKG
HCVFGERCRFEHSKPEKKEELPTTETLPLPSVPQAGPSEPEPSGPTPGLGTQDWVNAAEF
VPGQPYCGRAEPVKGETSVPLIEDLDGDSAVDNKDLRKQLCPYAAVGECRYGINCAYLHG
DVCDMCGLQVLHPTDNSQRSEHTKACIEAHEKDMEISFAIQRSKDMMCGVCMEVVFEKSN
PSERRFGILSNCSHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEDKED
KQKLIQKYKDGMGTKACRYFDEGRGSCPFGSNCFYKHAFPDGRLEEAQPQRRQTGSNNRT
RSTRRPPLWDIFDERASTDSLDTEDEDMVTFELSEMLLMLLAAGTDDEATDSEDEWDLFH
EELDDFYEIYL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcagcggcgtcttcagcggcttcatcagtaacaggaggttggaccaaa
cacgtaacctgccgatacttcatgcacggcctgtgcaaagaaggagacaactgtcgatac
tcgcataatctgtccaagagtaaaccagcagccatgatatgcaagttctttcagaagggc
cactgtgtgtttggagagcgctgcagattcgaacacagtaaacctgaaaagaaagaggag
ctgccaaccaccgagacgctgccgctgccttctgtcccacaggctggcccatcagaacct
gagcccagtgggccaacgcctggattaggaacacaagactgggtgaacgctgccgagttt
gttccaggacagccgtactgtggtcgagcagagccggtgaagggggagacttctgtccct
ctcattgaagacttagacggggactcggccgtggacaacaaagacttgaggaagcagctg
tgtccgtacgctgccgtcggagagtgtcgctacgggatcaactgcgcctatctccacggg
gatgtgtgcgacatgtgtggcctccaggtgctgcaccccacagacaacagccagcgctct
gagcacacaaaggcgtgcatcgaagcccacgagaaagacatggagatctcgtttgccatc
cagcgcagcaaggacatgatgtgcggcgtctgtatggaggtggtgtttgagaagtccaac
ccaagcgagcgtcgctttggcatcctgtccaactgcagccactgttactgtctgaaatgc
atccgcaagtggaggagcgccaagcagttcgagagcaaaatcatcaagtcttgtccagag
tgtcgaatcacgtcaaactttgtcatcccgagtgagtactgggtggaggacaaggaggac
aaacagaaactcatccagaagtacaaggatggcatggggaccaaagcttgtcggtacttc
gatgaaggccgtggatcgtgtccgtttgggtccaactgcttctacaaacacgcgttccct
gatggacgccttgaggaggcccaaccacagcgacgacaaactggatccaacaacaggacc
cggagtacgcgacgaccccccctctgggacatctttgatgagcgggcgagcacagactcc
ttggacacggaggacgaggacatggtgacgttcgagctgagcgagatgctcctcatgctg
cttgctgcagggacggacgacgaggccacagactcagaggacgagtgggacttgtttcac
gaggagctcgacgatttctacgagatttacctatag
DBGET
integrated database retrieval system
