Nematolebias whitei (Rio pearlfish): 119428322
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Entry
119428322 CDS
T08042
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119428322 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119428322 (nup107)
03036 Chromosome and associated proteins [BR:
nwh03036
]
119428322 (nup107)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119428322 (nup107)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119428322 (nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Vir_act_alpha_C
TetR_C_31
DUF4485
DUF3800
Motif
Other DBs
NCBI-GeneID:
119428322
NCBI-ProteinID:
XP_037551918
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Position
22:3187492..3202590
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AA seq
906 aa
AA seq
DB search
MDWGQKELLSPVVRDDEVTVAARRRKKVAFPSPSSDASVPMVTPARSLLRNTPASLFRQT
VTPRVPDVSSILASGVRTPRFAHTPRNASSNVYLDDSDWTNSFYASPTSGVENTSFFNDD
VANLSSALLKEDDPGEAAAASLFPEFLASFLKHSSSAVFELLEDYQNICQEKVDVLQSMV
LRAGQNSKTAGVRWLLQQENCTWRLVASLYRDRVQLALEDDMMIDMVDPSKSEKLVVEQL
FQRDAVIRQSQLVIDWLESIAKDQIRDFSDNIEYYAKNVCWENTLHALKMRRKSGATLTV
PLVTELDPDAPLRQQRPLADLDREDDARLLKNLFTLIRAGMTDEAQRLCKRCGQAWRAAT
LEGWKLYHDPNTTSGSSELQPVEGNPHRGIWKACCWRMAEEEQLNRYERAIYASLSGNLR
PLLTVCESWEDCVWAHFRVMVDSLVEKHLVSSGMAHEEVESLPREYLEANWTMEKVFEEL
QASESKRVLDEIKEHFHVIQKFIILGDLDGLMEEFSGWLAASKPLPSHLLRFMSHLLLFF
RSLGLALKEEVCVDVLKAYVSILIRDQQTDLVASYVGQLPADHATAQYAAFLETVTQPEL
RPRCLQLATGAGLDVSAITKLVVEAVRERDDTDFTHHSQTLETGTTKDDQKKIDIIDWLL
FDPAHRAEALKQSNAIMRKFLALQKNEAAKTVFSKVPEDSMKEIYSQWTSVGQTAPLLAE
DENAIREHLCIRAYLEAHEAFTDWFSHSSSAPQKPVPAPEAKFTERVANEMREKEYQAAL
TAWSCRLDVLTEDVKERIYNVLLFVDGGWMVDNRQESEVDTERSHQMAALRSLCLPRLTF
LLLSVLQSSSRHQEALRLADIISSDQHRLYRVFSKEEMRRFLQKLRESSLALLDRGLDPL
GYELQP
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggactggggtcagaaggagctgctgtctccggtggtccgagacgatgaagtgacggtc
gccgctcgcaggaggaagaaggtggccttcccatcacccagcagcgacgcctctgttccc
atggtaacgccagcccggtccctgctgaggaacaccccggcctctctgttcagacagact
gtaactcccagagttccagatgtttcctccattttggcgtcgggagttcggacacctcga
tttgcgcacacgccccgaaatgcttcgagtaacgtgtatttggacgacagcgactggacc
aacagcttttacgcctcccccacgtccggggtggagaacacgagcttcttcaacgacgac
gtggccaacctgagctcggcgctgctgaaggaggacgaccctggagaggcagcggccgcc
agtcttttcccagagttccttgcttcctttttgaaacactcttcttctgcggtgtttgag
ctgctggaggattatcagaacatctgccaggaaaaggtggacgtgctgcagtccatggtg
ctgagagcgggtcagaacagtaaaacggcaggagtccgctggctgctgcagcaggagaac
tgcacctggaggctcgtcgcttcgctctacagggatcgagtccagttggcgctggaggat
gacatgatgatagacatggttgatcccagtaagagtgagaagttagtggtggagcagctt
tttcagagagatgccgtcattcgacagagtcagctggtcattgattggttggagagcatc
gccaaggaccagatcagagatttttctgataatatcgaatattacgccaaaaacgtctgc
tgggagaacactctgcacgcgctgaagatgaggaggaagagtggcgccaccttgactgtt
cctctggtcactgagctggacccggacgctcctctccggcagcagcgccccctggcggac
ctggacagggaggacgacgcgcggctgctgaagaacctgttcaccctgatccgagcgggg
atgaccgacgaggctcagaggttgtgcaaacgctgcggtcaggcctggagagcagcgact
ctggaaggctggaaactgtaccacgaccccaacacgacctcaggtagctcagagctgcag
cctgttgaaggaaatccccacagagggatctggaaggcctgctgctggaggatggctgaa
gaggagcagttgaaccgatacgagcgagcgatctacgccagcctgagtggaaacctcaga
ccgctcctgaccgtgtgcgaatcgtgggaggactgcgtgtgggcgcacttcagagtgatg
gtcgactcgctggtggaaaagcatctcgtgtcgtcaggaatggcccacgaggaagtggag
tcgctgccgcgggaatatctggaggccaactggacgatggaaaaagtgtttgaggagctt
caagcgtccgagtcgaagagagtcttggatgagattaaagaacatttccacgtcatccag
aagtttatcatcctgggagatctggacggtttaatggaggagttttctggttggctggca
gcctctaagcccctcccatcacacctgctgcgtttcatgagtcacctgctgctgtttttc
cgctctctgggtttggctttgaaggaggaagtttgtgtcgatgtgctgaaggcgtacgtc
tcgatcctgatccgggaccagcagacggatcttgttgcaagctacgttggccagcttcct
gctgatcacgccaccgctcagtacgctgcttttctggagaccgtcacccagccggagctc
cgccctcgatgcctgcagctcgccaccggagctggtctggatgtttctgccataacgaag
ctggtggtggaggctgtcagagaacgagacgacacggattttacacatcacagccaaacg
ctggagacgggaaccacgaaggacgaccaaaagaagatcgacatcatcgattggctgctg
tttgaccccgcccaccgagctgaggctttgaagcagtccaatgccatcatgaggaagttt
ctggcgctgcagaaaaatgaagcggccaaaacggttttctctaaagttcccgaagactcg
atgaaggaaatttactcccagtggacgagcgtcggccagacggcgcccctgcttgctgag
gacgagaacgccatcagagagcacctgtgcatcagagcctacctggaagctcacgaggcg
ttcactgactggttcagccacagcagctcagcgccacaaaaaccagtaccagcccccgag
gccaaattcacagagagggtggccaacgagatgagagagaaggagtaccaggccgccctg
accgcctggtcgtgtcgacttgacgttctgactgaagacgtgaaggaaagaatctacaac
gtgctgctgttcgtggacggaggatggatggtcgacaacagacaggagtccgaggtcgat
acagagcgcagccaccagatggcggcgttgcgctccctgtgtcttcctcggctcaccttt
ctgctgctcagcgtcctgcagagctcctccagacaccaggaggcgctgcggcttgctgac
atcatctcatcggaccagcaccgcctctaccgggttttctccaaagaggagatgaggagg
ttccttcagaagctgcgggagtcgtctctggctctgttggaccgaggtctcgacccgctg
ggctacgaactgcagccatga
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