Nematolebias whitei (Rio pearlfish): 119428328
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Entry
119428328 CDS
T08042
Symbol
cald1a
Name
(RefSeq) caldesmon 1a isoform X1
KO
K12327
caldesmon
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
119428328 (cald1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119428328 (cald1a)
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
119428328 (cald1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
119428328
NCBI-ProteinID:
XP_037551924
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Position
22:complement(<7519210..7601628)
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AA seq
571 aa
AA seq
DB search
MDDLDFERRRELRRQKREEMRLEAERMLKNDDDEEEAAREKRRRARQERLKNRENEEPSS
QPESLVVTNSHSMTESVSVSSSYGGVGDDEDQALLDRMAKREERRQRRMKEALERQRQPD
PMEGTEKNDTEEERPSWRRYRDNVDEEEKTMANSLKREEPKEEEEVVSETGEEKREEEAE
VEENEPRRSNLREQAETEEPKTQQKELAEEETRSVVSESSNQAQSASSEAEEDAVASGED
EEVNERGGFKEDREDQWKHNGGLHEEAAPKQHWKPERAPSRGSVRSPEAAADEQDEDARL
EAERKLEELKRRRDDAESEEFERMRQKQQEAEAELEELKRKREERRKVLEEEERQRKQEE
AEKNAREEEEKRKMKEEIEKRRAEAAEKRQKAEDTLDGEGKPFKCFSPRGSSLKIGERAE
FLNKSAQKSAVKTAHSPVVSKIDNRLEQYTSAAQRENKECRSPRSTISDLPLVTDVRNIK
SMWEKGNVFSSPGSGGSAFKEAAVIKTGVAGRINDWLSKTPESGKTSGGRPADLKPVNVT
NKRSLWENKGASPTKMAGMGETKSVTNGMGH
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggacgatttggactttgagcggcgccgggagctgaggaggcagaagcgggaggagatg
cgccttgaggctgaacggatgctgaagaatgacgacgatgaagaggaggctgctcgcgag
aagaggcgcagggcgcgccaggagaggctgaagaacagggagaacgaggagcccagcagc
caaccggagagcctggtcgtgaccaacagccacagtatgacggagtccgtgtctgtgagc
agttcctacggaggcgtcggagacgatgaggaccaggccctgctggaccgcatggccaaa
cgggaggagaggcggcagagacgcatgaaggaggcgctggagaggcagaggcagccggac
cccatggagggcacagagaaaaacgacacagaggaggagaggccctcctggcgccgttac
cgcgacaacgtggacgaagaggaaaagacgatggcgaacagcctgaagagagaagagccg
aaagaggaagaagaggttgtttcggagacgggagaggaaaagagggaggaggaagctgaa
gttgaggaaaacgaaccgagaagatctaacctaagagaacaggctgaaaccgaggagcct
aaaacgcaacaaaaggagctcgccgaagaagaaactcgttcggtagtcagtgagagttca
aatcaggcccagtcagcaagctcagaggccgaggaggacgcagtagcgtcaggggaagat
gaagaggtaaacgagagaggcgggttcaaggaggacagggaggaccagtggaagcacaat
ggagggctgcacgaggaggcggctcccaaacagcactggaaacccgagagggcccccagc
cgtggcagtgtgcgttcccccgaggcggcggcggacgagcaggacgaggacgctcggctg
gaggcagagcgcaagctggaggagctgaagcgccgccgcgatgacgccgagagcgaggag
ttcgagaggatgaggcagaagcagcaggaggccgaggccgagctggaggagctgaagagg
aagagggaggagaggaggaaggttctggaggaggaagagaggcagcgcaagcaggaggag
gcggaaaagaatgccagagaggaggaggagaagaggaagatgaaggaggagattgaaaag
cggagagcagaagctgctgagaagaggcagaaggcggaggacactctggacggggagggg
aaaccgttcaagtgtttcagccctcgtggttcctccctgaagattggagagagagcggag
tttctgaacaagtctgctcagaaaagtgcggtgaagacggcccattctcctgtggtgtcc
aagatcgacaacaggctggagcagtacacctcagcagctcagagagaaaacaaggagtgt
cggtctccccgctccacgatttcagatctccctctggtcactgacgtccgaaacattaag
agcatgtgggagaaaggcaacgtgttcagctcacctgggagcggcgggagcgcctttaag
gaagcagctgtgataaagacgggcgtggccggccgcatcaacgactggctgagcaaaacc
cccgagagtggcaagacgtcaggaggaaggccagcggacctgaagcccgtcaacgtcacc
aacaagaggagtctatgggaaaacaaaggcgcctctccgacaaagatggcaggcatgggg
gagaccaaatcagtcaccaacggtatgggacactaa
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