Nematolebias whitei (Rio pearlfish): 119428355
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Entry
119428355 CDS
T08042
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119428355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119428355
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119428355
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119428355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
119428355
NCBI-ProteinID:
XP_037551959
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All DBs
Position
22:1839771..1854176
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AA seq
523 aa
AA seq
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MFGANRKKFMEGGLDSDYTDESGLYYSQQSMFPHRTDKDMLTSSSSSSTSQLSQLGASLY
GPQSALGFPMRGMNSSAAPQLSRSGLNQSASQLPSHTSTPNSSSLHTPPSPSRGILPISS
RSVLNHNQQVGGPTGQTSGLGGGERGGRSGTMGSPSRSSPSIIGMPKQPQSRQPFTFNRN
PGFNMNSSLSSNIFNGTDGSENVTGLDLSDFPALADRSRRDGSSNCAPQHNPLAGRAPYV
GMVTKPSNEQTQDFSIHNEDFPALPGPNYQTKDPTSASEDSKTNLNSSGKTSSSSDGPKF
PGDKSSAPSNNNQSKKGIQVLPDGRVTNIPVGMVTDQFGMIGLLTFIRAAETDPGMVHLA
LGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLG
RYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNAYERG
TYYFFDCLNWRKVAKEFHLEYDKLEERPHVPSTFNYNPAQQAF
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctaacaggaagaagttcatggagggggggctggacagcgactacacggac
gagtcgggcctctactacagccagcagtccatgttccctcaccggaccgacaaagacatg
ctgacgtcttcctcctcttcgtccaccagtcagctgtcccagctgggagccagtttgtac
ggccctcagagtgcgctcgggtttcccatgcgagggatgaacagcagcgccgcgcctcag
ctcagtcggagcgggctgaaccagtctgccagccagctgcccagtcacaccagtaccccc
aactccagctcgctgcacacgccgccctcacccagcagggggatcctgcccataagcagc
cggagcgtcctaaaccacaaccagcaggtgggcggtccgacgggtcagacgagtgggtta
ggaggaggagagagaggagggaggagcggtaccatggggagtcccagccggtcgtctccg
agcatcatagggatgcccaaacagccacagtcgaggcagccgttcacatttaacaggaat
ccaggcttcaacatgaacagctctttatccagcaacatctttaacggcacagacggcagt
gagaatgtgacgggtttggacctctccgacttcccagcgttagctgaccggagtcggagg
gacggaagttcgaattgtgccccacagcacaacccgctggccggccgggcgccctatgtc
ggcatggtaacgaagccatctaacgagcagacgcaggacttctccatccacaacgaggac
ttccccgctctgcctgggccaaactaccaaacgaaagaccccaccagcgccagcgaagac
agcaaaacgaacttgaactcatcaggaaagacctcgtcgagctcggacggcccaaagttt
ccgggcgataagagctcagctccgagcaacaacaaccagtcgaagaaagggattcaggtt
cttcctgacggccgggttaccaacatccccgtcggcatggtaacggaccagttcggaatg
atcggcttgttgacgttcatccgggcggcggagacggaccccggcatggtccacctggcg
ctgggctcggacctgaccacgctcggcctcaacctcaactcaccggagaatctttaccca
aagtttgcgtctccgtgggcgtcggcgccgtgtcggccgcaggacatcgacttccacgtc
ccctcagaatatctcaccaacatccacataagggacaagttggcagccatcaagttgggt
cggtacggagaagatctgctgttttacctctactacatgaacggaggagacctgctacaa
ctgctagctgcagtagaactttttaacagggactggcggtaccataaagaggagcgggtc
tggatcacccgggcccctgggatggagcccacgctgaagaccaacgcctacgaaagaggg
acctactacttctttgactgtctcaactggaggaaagtggccaaggagtttcacctggaa
tacgacaaactagaagagcgaccccacgttccctccaccttcaactataaccccgcccag
caggccttctga
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