Nematolebias whitei (Rio pearlfish): 119428373
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Entry
119428373 CDS
T08042
Symbol
cntn1b
Name
(RefSeq) contactin 1b isoform X1
KO
K06759
contactin 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119428373 (cntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119428373 (cntn1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
nwh00537
]
119428373 (cntn1b)
Cell adhesion molecules [BR:
nwh04515
]
Immunoglobulin superfamily
Contactins
119428373 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
nwh00537
]
Others
119428373 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
PsaS
Motif
Other DBs
NCBI-GeneID:
119428373
NCBI-ProteinID:
XP_037551978
LinkDB
All DBs
Position
22:9165695..9184671
Genome browser
AA seq
927 aa
AA seq
DB search
MTQEKFDSRPVTEVKRESDSVIEEFPEEERESVYVKEGQGAVLLCVPPKVWPQEVTYQWI
YNEFPVFLRTDRRRFVSQKTGNLYIAKVEAQDAGNYSCFVSSPILGKGVYSKFIPLIPLH
PDDGEERKYPADIRVKFPDTTAMLASNITLECFALGNPIPHIVWRKVDATDLPANHEISE
SGAVLHLYNVQYEDVGAYDCEAINTKGKDWHKAWLYVESAPEWAETINNTQVDIGSEHTM
RCVASGKPFPFIRWYKDGYMYGKGELKFSSLTFDDSGMYQCIAENFWGIKYANAELRVIA
CAPTFELNPVKKQLLGANNARVVVECKPRAAPRPRFTWTKGKELLFNSSRISILFDGSLE
IFNATRNDEGFYTCFAENDRGKCNSSGYLTITDATSISIAPEDTEGMVGDEVILRCAASF
DPMLDITFIWAIDFRVIDFNTEWQHYEQVMNEDGVGDLRIKNLQIWHEGRYTCTAQTVVD
SDTAYADLKVVGVPGPPGVIRVEEIGDTWVKLLWSKAAEHNSPILYYTIQTRHYWALNED
DWRNASTSPTVLDGTMERADVTDLYPWMEYQFRIIAVNEYGCGEASIPSLKIKTWDAAPV
VSPTDVAGYGGRNGEIIITWNPVQPWYFYGKKFGYIVAFKPHDAYDWWYETISDPETRRH
VHRDSYFIPTEEDFQVREFQVKIKSFNVKGDGPYSLTKVIYYPRDVPTEPPTDVYARPVS
STEAVVWWLPVVDTGTGLQQYIEGYQVKYWRKYDDPEPGAHRIFVPATTNQTRLENMLPD
SHYLIEVRAFNGAGLGPPGEHCEMFTKRPPPAEPPRMWRYISWTGKWLYVWWDHIQYDWF
GNVSFPLYYKVMFRKTGYIYGKVYVTGWHFMDFPMPQLGDFELMVRGRYEGGDGPVRKIR
IQGKASMTTPTLSLVLFMLLTSCISGL
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggagaaatttgatagtcggcccgtcactgaggtcaaacgtgagtcagattca
gttatagaagagtttcctgaggaagagagagaatcggtgtatgtaaaagaaggacagggg
gccgttctgttgtgtgtccctccaaaagtctggccccaggaagtgacttatcagtggatc
tacaatgagttcccagtgttcctgcgcacagaccgtcgtcggtttgtctcccagaagaca
ggaaacctatacatcgcaaaagtggaagcgcaggacgcagggaactactcatgctttgtt
tctagtcccatcttagggaagggcgtctactccaagttcatcccactcatccctctacac
cctgatgacggtgaggagagaaaatatccagcagacatcagggtgaaatttccagacacc
accgccatgctggcctccaacatcaccttggagtgctttgctcttggaaatcccatccca
cacattgtatggaggaaagtagatgccaccgaccttccagcaaatcatgaaatcagcgaa
tctggtgctgtgcttcatctgtacaatgttcagtatgaagatgttggtgcttacgattgc
gaagccatcaacactaaaggaaaggactggcacaaggcctggctctatgttgagtctgca
ccagaatgggcagagaccatcaacaacactcaggtggacatcggttcagaacatacgatg
cgctgtgtcgcatcaggaaaacccttcccctttatccgctggtacaaagatggatatatg
tatgggaaaggtgagctcaagttttccagtctgacttttgacgactctgggatgtaccag
tgcatcgctgagaatttttggggcatcaaatacgccaacgcagagctgcgagtcatcgcg
tgcgcaccgactttcgagctcaaccccgtaaaaaagcagcttcttggagccaacaatgca
cgtgtggtggtcgagtgcaaacccagagctgctccgagacctcggttcacctggacgaag
ggcaaagagctgcttttcaacagctcacgcatttccatcttgtttgatgggagtctggag
atcttcaatgccaccagaaacgacgagggcttttacacctgctttgctgagaatgacaga
ggaaagtgcaacagctcaggttatctcaccatcacagatgctaccagtatctcaatagct
cctgaagatactgagggaatggttggagacgaggtgatcctcaggtgtgctgcttcattt
gaccccatgctggacatcacattcatctgggccatagacttcagagtcattgactttaac
actgagtggcagcactatgagcaagttatgaatgaagatggagttggtgacttgcggata
aagaacctccagatttggcatgaaggtcgctacacctgcacagctcaaacagtggtggat
agcgacaccgcttatgctgacctcaaagttgtaggtgttcctgggcctcccggtgtgatt
cgagtggaagagattggtgacacatgggtcaagcttttgtggtccaaagcagctgagcac
aacagtcccatcctttactacaccatccagaccagacactactgggctctgaatgaagat
gactggaggaatgccagcacctctccaacagtccttgatggtactatggaaagagcagat
gtaacagacttatatccttggatggagtatcagttcaggatcattgctgttaatgaatat
ggatgtggagaagcaagtataccttccctcaagatcaaaacctgggatgctgctcctgtt
gtttcacccactgatgtagcaggttatgggggtagaaatggtgagatcatcatcacatgg
aatcctgtgcagccctggtatttctatggcaagaagtttggttacattgttgcgttcaag
ccccatgatgcttacgactggtggtacgaaactatctcagaccctgagacgagacgacac
gtacacagagattcttactttattccaactgaggaagacttccaggttcgagagtttcaa
gtgaagatcaagtcctttaacgtgaaaggagatggaccatacagcctcactaaagtcatt
tactacccaagggatgtacccacagaacctccaacagacgtctatgccaggccggtgtct
tccactgaagcagtggtttggtggctgccagtggttgacactggaacaggtctacagcag
tacattgaaggataccaggtcaaatactggagaaagtacgatgacccagagcctggagcc
catcgcatatttgttccggcaacaactaatcagaccagactggagaacatgctgccagac
tcacactaccttatcgaggtccgcgccttcaatggagcagggctcggaccacctggcgaa
cactgtgagatgttcaccaagagaccaccacctgcagagcctcccaggatgtggcgctac
atcagctggacaggaaagtggttatacgtgtggtgggatcatatccagtacgactggttt
ggaaatgtttccttccctctgtactacaaggtaatgttcagaaaaacaggctacatctat
ggcaaagtctacgtcaccggctggcacttcatggacttccccatgccacaacttggagac
tttgaactgatggtccgtggccgttatgaaggaggagatggcccagtccggaagattagg
attcagggtaaagcatctatgaccacgcccactttaagcctcgtgttgttcatgctgctg
acgtcatgcattagtggactttaa
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