Nematolebias whitei (Rio pearlfish): 119428378
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Entry
119428378 CDS
T08042
Symbol
arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119428378 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119428378 (arid2)
03021 Transcription machinery [BR:
nwh03021
]
119428378 (arid2)
03036 Chromosome and associated proteins [BR:
nwh03036
]
119428378 (arid2)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Helix-turn-helix
ARID
119428378 (arid2)
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119428378 (arid2)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
119428378 (arid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
119428378
NCBI-ProteinID:
XP_037551985
LinkDB
All DBs
Position
22:22749638..22805948
Genome browser
AA seq
1675 aa
AA seq
DB search
MASSTGKNVPDQRRKGQAFLDELRQFHQSRGSPFKKIPIVGGKELDLNALYVRVVSLGGF
AKVSDKNQWAELGEEFHFPKSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEAQPGNPKA
SLPVGAIPNSYNYQQHVVSDYLRQSYGLSSDFVQPCDYNKLVLSLLSSLPNEVDFAVNVC
TLLSNESKHAMQLDKDPKLVTLLLAHAGVFDDSLGSFSGVFGTDWKEKTSRDFVRFWREV
VEDAEVRELIWDKSSPAQDGTSCEERWPSLFHPPRNPGISDAEAQRVLQIAVILRNLSFE
EANVKLLAANRTCLRFLLLCAHCNLISLRQLGLDTLGNVAAELQLDPVDFRTTHLIFHTI
TKCLMSRDRFLKMRAMEILGNLSKADDNGVLICEYVDQESYREVMMLLTLPDLLLLMASL
EVLYLLAQLGEVPCSKIASVDRSIDLLVRLVSVDLHTFGPDALTAVRLIEHQANAEQAAE
VRPQLVEQVPAAVQGAPAPVTRVPVQSSQPPPGIVELDGEKFTLQWLNAHFETNPEGSVS
RSEMYSEYLTTCSKMGRSNILNSTGFLKCLRTVFPNHTMRRQDEAKVSSQLQILLVGIRR
RAIPLPIQLYYQQQQNPAAAAPPPPAAPHEAPADPQTLPPVLPPGHSNLGSQFVRAPGPT
HNTGVAAPSVALTSQEPPPASHSTVPRHPVPPQVPLVLPSNPLAAQPQLQVRLGTAAQIP
PSAPATQNHSPQNPSPSLSSQQQHSPMLPTGTPVTLFQPVPQGHILTARVQGVCPPITQH
PPLPQTLPLCGNPSGAPLVEPQCASASAPSIQAGGGQMLSNPGVPNSQGSRVAFQNIAPK
PASNQSGGPAATVAPPTQQPQSQQQAQSVVIVSPSPQPNTAYPPAIHQIVLANPSTITGA
QTVQVAGQPGAAAAPCPPPAHSNTQVQSSQTVSHALSTKRHQQHQQQPLQVLPQTPPLQP
TSTESSLIKQLLLPKRGPSTPGGKLILPAPQVPPPNNMITPSPQVIYQAGYSSQNPPPQP
QQLSVQLLPGQLPAVSSPPLQTVQLLPGQLISTSSPGATAIIQGPTAAGQVTFTVVPNTG
FTTSTAAVAAISTGVVAPPVPPPLFSTGTAPHHIPAGPPPPPPLPAPLRGDKIICQKEEE
AKDTTGLHIHERKIEVMENSSVAEGDSPNGKTSNGDVAAGAKLLNGQKCMESNLPPYHSG
NSQGVPNGPVLESPAANGKQALSPGLSTLPEGPDPKKTLVNGVCDFERGEGGGNFTKNIP
NHIASKQHLGNGEVGSSERSPDPCLPSPPPQQDTAKAQQVERLANGPQPVCHRPPSELTN
GPLGLGHASPVLRQQLLPNSSLPSAITSQSPVASPANGVVPEARGLKRPAENEDRSTAAP
SGIPNKVGVRIITISDPNNAGSSSTMVAVPAGTDPSTVAKVAIENATQQRNYSPTQAAGA
TPAVTPSPPPVSQPAPTGHHHPHLPAQQTPATPSEPSRKAGQNFKCLWQSCKRWFETPSQ
VFYHAATQHGGKDVYGGHCQWEGCEPFPRQRLSFITHLQDKHCSREALLAGLKLEEQAQN
PNQTSSQTPPATGSTPAQRAPKAIVNHPSAALMALRRGSRNLVFRDFTDEKEGPVTKHIR
LTAALTLKNIAKHSDCGRMLVKRHETHLSVLALSNMEVSTTLAKCLYELTRSLQA
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcaagttcgacggggaaaaatgtaccagatcagcggaggaaaggacaggctttcctg
gacgagctgcggcaattccaccaaagcagagggtcgccgttcaagaagattcctatcgtg
ggtgggaaagagctggacctgaacgctctctatgtcagagtcgtctctttaggtggattt
gctaaggtttctgacaaaaaccaatgggctgaacttggagaggagttccactttcccaag
agttgttccaacgcggcattcgctttaaagcagtactacctgcgatacctggagaagtac
gagaaggtccaccacttcggtgaggatgacgacgaagctcagccggggaaccccaaagcc
tctcttccagtcggtgcaatcccaaactcttacaactaccagcaacatgtcgtatcagac
tatctccgccaaagttatggactgtcttcagattttgttcagccgtgcgactacaacaaa
ctggtgctgtctctcctctcgagcctccccaacgaagtcgacttcgccgttaacgtttgc
acactgctgtccaacgagagcaaacacgccatgcagctggacaaagaccccaaactggtc
acgttgctgctggcccacgccggcgtcttcgacgactcacttggcagcttctctggggtg
tttgggacagactggaaggagaaaacctcccgggactttgtcaggttctggagagaggtg
gtggaggacgctgaagtccgagagctgatctgggacaagagcagtccagcacaagacggt
acgtcgtgcgaggagcgctggccgagcctcttccaccctccgcggaacccgggtatcagc
gacgcagaggcccagcgagtgctgcagatcgccgtcatcctgcgaaacctctctttcgag
gaggccaacgtcaagctgctggcggccaaccgaacgtgcctgcgcttccttctgctctgc
gcccactgcaacctcatctcactccgacagcttggactggacacgctgggcaacgtggct
gctgagcttcagctggatcctgtagactttcggacgacgcacctgatcttccacaccatc
accaaatgcttgatgtcccgggaccggttcctgaaaatgcgagccatggagatcctgggg
aacctcagcaaggcggacgataacggtgtgctgatctgcgagtatgtggaccaggagtcg
tacagggaggtgatgatgctcctcactctgccagacctcctgctcctcatggcctccttg
gaggtgctctatctgctggcccagcttggagaggtgccctgcagcaagatcgcctcagtc
gaccgcagcatagacctcttggtgcggttagtgtctgtagaccttcacacgtttgggcct
gacgcactgacggcggtacggttgatcgagcaccaggccaacgccgagcaggcggccgag
gtccgaccgcagctggtcgagcaggttcctgcagccgtgcagggagctccggcgccggtg
accagggtcccggtccagtccagtcaaccccctcctggcattgttgaactggatggggag
aagtttacgctgcagtggctaaatgcacacttcgagacgaaccccgagggctccgtgtct
cgatcagaaatgtactcagagtacctcaccacgtgcagcaaaatgggtcggagcaacatc
ctgaactccaccggcttcctcaaatgtctgcggaccgtgtttcccaaccacacgatgagg
cggcaagatgaggctaaagtcagcagccagctccagatcctcctggtgggaataaggcga
agggcgatccctctgcccatccagttgtactaccagcagcagcagaacccggcagcggca
gctcctccacctccagcagctccgcatgaagcacctgcagacccccagaccctgccacca
gtcttacctccaggacactctaatctgggatcacagtttgtccgggccccgggcccgacc
cacaacactggtgtcgccgcaccctctgtggccttgacttcacaggaaccacctcctgcg
agccactcgactgttccccgccacccggtgccaccacaggtgcctctggtgctaccatca
aaccctctggcagcacagccgcagctacaagtccgactcggtacggcggcccagattcca
ccgtctgctccagccacccagaaccacagcccccagaacccctccccttcactctcgtct
cagcagcagcactcccccatgctccccactgggacgcccgtcacacttttccaacctgta
ccacagggccacatcctcaccgccagagtacaaggcgtgtgccccccaattacccagcat
ccacctctgcctcagacccttcctctctgtgggaatccaagcggagctccactggttgaa
ccccagtgtgcttctgcttcagcaccctccatccaggctgggggtgggcagatgttgagt
aatccaggtgtgcccaattcccaagggtcgcgtgtcgcatttcagaatatcgcccccaaa
ccagcgtcaaaccagtcaggtgggccggcagccacagtagcccctcccacccagcagcct
cagtctcagcagcaggcacaaagtgtggtcatcgtcagtcccagtcctcagcccaacaca
gcctacccccctgccatacaccagattgttctcgccaacccctccaccatcactggcgct
cagactgtccaggtagctgggcagcctggagctgctgccgctccctgcccgcctcccgct
cattccaacacccaggtccagtcaagtcaaacggtcagccatgctctgtccacaaaacgg
catcagcagcaccaacagcagcctctccaagttctaccacagactcctccacttcagcct
acctccaccgagtccagcttgatcaagcagctactgcttccaaagcgggggccgtctaca
ccaggaggaaagttgatcttacctgctccacaggtgccccctcccaacaacatgataacc
cccagcccacaggtcatctatcaggcaggctacagcagccagaatcctcctccccagcct
cagcagctcagcgtccagctgctcccaggtcagcttcctgctgtcagttcgccccccctg
cagacggttcagctgctgccaggacagctcatttccacaagcagtccaggggcgaccgcc
atcattcagggtcccacagcagcaggacaggtcacgttcaccgtggtccccaacactggc
ttcaccacctccactgctgccgtcgctgccatcagcacaggggtcgtcgctccacctgtt
cccccacctttattttccactggaacagccccccatcacatccctgcaggtccaccacct
ccaccaccactgccagctcctcttagaggagacaagatcatttgtcaaaaggaggaagag
gccaaggacaccacggggctgcacatccacgagaggaagatcgaggtgatggagaactcc
tccgtggcggagggagactcccccaatggaaaaactagtaatggggatgttgcggcaggt
gccaagctgctaaacggccagaaatgcatggagtctaatctacctccgtaccactcaggg
aacagccagggagtacccaacggcccggttctggagagtcctgcggctaacgggaagcag
gccctctccccgggcctgagcacgcttcctgagggccccgaccccaaaaagactctggtc
aacggggtgtgtgactttgagcggggagagggcggggggaacttcaccaagaacattcca
aatcacattgcttccaaacaacacttggggaatggggaagtgggctcctctgaaaggagc
ccagacccgtgtctccccagtcctcctcctcagcaggacactgccaaagcccagcaggtt
gagcgcctggctaacggcccccagcctgtatgtcacaggcctccctcagaattaaccaat
ggacctttggggctgggccacgcctcgcctgtgctaaggcagcaactgcttcccaactcc
tcactcccctccgccattacctcccagagccccgtggcctcgcccgcaaacggagtggtc
ccagaggcccgaggcctcaaaaggccagctgaaaacgaagaccgcagcacagcagcaccc
tcggggatccccaacaaagtgggagtgcggatcattaccatcagcgaccccaacaacgcc
ggcagcagctccaccatggtggcagtgcccgcgggaaccgacccaagcacagtagccaaa
gtagcaatagagaacgccactcagcagaggaactactcgcccacgcaggcagccggcgcc
acgcccgctgtaaccccgtccccaccacccgtctcccagcctgctccgacgggtcaccac
cacccccacctcccagcacagcagacccccgcgacaccttcggagccgagcaggaaagct
gggcagaacttcaagtgtctgtggcagtcctgtaaacggtggttcgaaacgccgtctcaa
gtcttttaccacgcagcgacgcaacacggcgggaaggatgtgtacggcgggcactgtcag
tgggagggctgtgaaccgttcccccgacagagactgtccttcatcacacatctgcaggat
aagcactgttctcgagaggctttactggctggactcaaactagaggagcaggcacaaaac
cccaatcagacttcttcccagactccaccagcgacgggcagcactccggcacaacgagca
ccaaaagcaatcgtcaatcatccgagcgcagctctcatggccctacgcagaggttctcga
aacttggtcttcagggacttcactgacgagaaggagggaccagtgaccaaacacattcga
ctaaccgccgccttaacgttaaagaacatcgccaagcactcggactgcgggcgcatgttg
gtgaagaggcatgagacgcacctctctgtgctggcgcttagtaacatggaggtgtccacc
acgctcgccaaatgcctttatgaactcacacgctcgctccaggcttag
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