Nematolebias whitei (Rio pearlfish): 119428494
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Entry
119428494 CDS
T08042
Symbol
si:dkey-159a18.1
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119428494 (si:dkey-159a18.1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
119428494
NCBI-ProteinID:
XP_037552104
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Position
22:14652504..14670434
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AA seq
839 aa
AA seq
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MFWKTGVLIVGCVLLPFCLLGAESSGRWGKSVTFHRTRGKNRPERETSSSSNTGNSSQGH
AFTSCRIPLTPAEHEVLDDNTHETGFNGDDGSYVILTWVGDGTGVILVLSTISSPLDSFL
EGGSSRLYRSTDYGKSFHDISQSINHTFIKEEFGVSVGPGSSVILTADTPVFGNPGGIIF
TSTDAGATFRFIQLPFHLAQPITYHFLNPDYLVALSIDGGLWLSLDFGAKWTKVHDGVHS
FSWGAGINLFFSCSQVDAVEAEERGDLLLKRTKDLGRTFTIIHEDIYSFGYIGAFLFFSV
MEDSRSPRVMYFSSDQGDSFSQALLPSASTEQFYSILDGDEDMLFMHVDNPGDTYFGTMY
TSDDRGILFSKSLERHLFDGQRKSDFTNITSLRGVYLTNKLDVDGHVRSVISFNRGGTWR
QLNKPDNVNCGDHVKKCNLHIHGEHSRNNRIVPMLALSEPTAIGLVIAHGTVGDSLSSSQ
HPDVFVSSDGGYNWRGTLRGPHHYSLLDSGGLLVAVEAHHKGQVKTIKFSTDEGQCWKLY
NFTEQSFFFAGLASEPGTKAMSVSVWGFRPEEDGQPMWVAVTIDFQSLITRQCNARDYEE
WLAHSTGGDSERNGCVLGLKETYRRLKKQSFCRNGRNFAVSKKQSPCSCTREDYICDYGY
YRHVNTSECVRQPVAANKTLDACLNGEEDELLTAGYRKVPSDRCEGGFTPHLQVPTVIQP
CGVKPSSEPPGKTTSSVTHFDTLTERLVLILVCAGAALIILLVIVSAVLAVRRVADRTRT
PAYSFSNLRLQEDTNGITAEFESIASSNGTACHQDSDEDLLHYHSTNFQGIANTTGQGC
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgttctggaaaactggggtccttattgtggggtgcgttctgctccctttctgtcttctg
ggcgcggagagcagcggccggtgggggaaatcggtgactttccatcggactcggggcaaa
aaccgccccgaaagggaaaccagcagctcatccaacactgggaactcttctcagggtcat
gctttcacctcctgtcgcatcccactcaccccggccgaacacgaggttctggatgacaac
acacatgagacagggtttaatggcgatgatggctcctacgtgattctcacatgggtgggc
gacggcacaggagtgattctggtgttgtcaacaatcagctctccgcttgattcttttctc
gaaggaggctcgtcacgactttacaggagtaccgattacggcaagtcctttcatgacatc
tcccagagcatcaaccacaccttcatcaaagaggagtttggagtcagtgttggaccagga
agctcagtgatactgactgcagacacgcctgtttttggcaatccaggtgggatcatcttc
acctccacagatgccggggcaacgttcagattcatacagctgcccttccacctggctcag
ccgatcacgtaccacttcctcaaccccgactatctggtggccctcagcattgacggcggt
ctttggctctctctggactttggtgccaagtggacaaaagttcatgatggagtgcattct
ttctcatggggtgcaggcataaatttgttcttcagttgcagccaagtagatgcagttgag
gcagaagagcgaggagatttactgctgaagaggacaaaggatctgggtagaaccttcacc
atcatccatgaggacatctacagttttggctacatcggagcttttctcttcttctctgtg
atggaggactcgaggtctcctcgtgtcatgtacttctcatcagaccagggagattcgttc
agtcaagccctcctgccttctgcttccactgagcagttttactccatcctggacggggat
gaggacatgctcttcatgcatgtggacaacccaggagacacctactttgggaccatgtac
acttcagacgaccgaggcatcttgttctccaagtcactggagcgccacctgtttgatgga
cagaggaagagtgacttcaccaacatcacatcactgagaggtgtctatctcaccaacaaa
ctggacgttgatggccatgtacgatctgtcatttcctttaatagaggaggaacatggagg
caactcaacaaacctgacaatgtaaactgtggagaccatgtcaagaagtgcaaccttcat
attcacggagaacacagtcgtaataacaggatagtacctatgctggctctgtctgaacca
actgccattggtcttgttatcgctcacggcactgtaggagattctttgtcctcatctcaa
cacccagatgtgttcgtttcctctgatggggggtataactggagggggacattaaggggc
cctcaccactacagcctattggactctgggggtctccttgtggctgtggaggcccaccat
aaaggacaagtcaagaccatcaagttctccactgatgaaggccagtgctggaagttgtat
aacttcaccgagcagtcgttcttcttcgccggcctggcgtctgagcctggcaccaaggcc
atgagcgtcagcgtgtggggcttccgtccagaggaagacggacagcccatgtgggtggcc
gtcaccatcgacttccagagcctcattaccagacagtgtaatgctcgagactatgaagag
tggctagctcattccacaggaggagattcggagagaaacggctgcgtccttggattgaag
gagacttacaggaggctaaagaagcagtccttctgcagaaatggcaggaactttgcagtg
agcaagaagcagagcccctgctcatgcaccagggaggactacatatgtgactatggttac
tatcgtcatgtgaacacctcggagtgcgtgagacaaccggtcgctgcaaataaaaccctt
gacgcctgtctgaatggagaggaggatgagcttctgactgcagggtaccgaaaggttcca
agtgacaggtgtgagggggggttcacacctcatctccaagtcccgacagttattcaaccg
tgtggggttaaacccagctctgaacctcctggcaagacaacatcttcagtcacacacttt
gacacactgacagaaaggctggtcctgatcctcgtgtgtgcaggtgcagcacttatcatc
ctgctagtcatcgtctctgcagttcttgcagtcaggagagtggctgacagaaccaggacc
cctgcatatagtttctccaacctgcgccttcaggaagacactaacggcatcacagctgag
tttgaaagtatcgccagcagtaacggtacagcctgccatcaggattcagatgaagatctt
cttcattaccattcgacaaattttcaaggaattgctaacactacaggccaagggtgttaa
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