Nematolebias whitei (Rio pearlfish): 119428769
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Entry
119428769 CDS
T08042
Symbol
als2b
Name
(RefSeq) alsin
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119428769 (als2b)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
119428769 (als2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DH_Alsin
WD40_RLD
RCC1
RCC1_2
MORN
VPS9
PH_alsin
Alsin_RLD
HA_Alsin
PH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
119428769
NCBI-ProteinID:
XP_037552375
LinkDB
All DBs
Position
23:17211857..17258960
Genome browser
AA seq
1645 aa
AA seq
DB search
MDTLRKSSEEDDDAGGRGLLHTWKGYSYSVTPERLLLRRPVLQVALGAQHGVLLVEGGQV
YSFGELPWKQRPASEAVEPTLESALGGQRVVTVAAGSFHSGAVTEDGGVHMWGDNGAGQC
GLSGLSLVPNPTPLALLDSSGAQTVPVVELACGEKHSLALSVQREVWAWGGATVPPWKPQ
RVEGLAGRCVLQVACGADHNLALVRCLGSKEVQRPPVDKCNQCNQLLFTMTDKEDHVIIS
DSHFCSPRGEDGLQAPPPTQILKSSPSEPVLPSYVTSSPIPAAPSPKSRTDPTSEPSSAQ
TSEGAGTVLTNGEQPTPDSNGSVQSRSGSAAPGVKSSPYPDEQAVKEYLRKLSDCTQTAS
KMPPSGAQGSSTLNSLVASCASAVSERVASTYEALSLRKMMNFYLPSRSEALGGVSDNAA
ERVRQEDSVQAKKSSSTGDICEEETESLRRRLSLPGLLSQVSPRLLRKVGRPRIRASAFT
PMEGGVPDAPEVLPTLQTEVWSWGQGEDGQLGHGDNSVRLQPQCIKSLNNKEVVRVVAGA
HHSVALTAQSQVFSWGSNSAGQLGHMEAPSTIPRLAKLSEGIRVWDVSAGERHTLLLADG
DCIQPIIYYSGQQVKDEEEKAGQEEGGEEEEENQAGAYTQQPVLLPFCMNLGFVNSVFAG
GLSCVALSDRNVMGFIAGLHELASAERKFYCKLCSIRSQVLRPLLELESLSSALGQVTFE
LLQMLAGRFSLLCHLTGQHAVSLTANIRRCRDVKSLLILDHTSIFLDSYNDYCSAVGNFH
VMGGFHALTKPTLDMFGKSPELLQRLSECSEENPVVSDLFVALFYLPSLHLHEYGRLLLK
LGTCFEVCSSEYQKLQDSCSKFEAFTVQLKRKRKEANYTFHFWKSFPGKMTDSLRKPHRR
LIYESSNKSLTLQNAGRFSVNWFILFNDSLVHAQGVAPHKNPFSTHHIFPLATLWVEPMP
EDDTGLQGLKVITPEETFTLLASSPTEKSKWLRAINQAVAHALSGAGRNAGGSGPRSEPP
ICRTASYTFYKDGRFKEATYEGHWLTGKPHGSGELKWPDGRIYTGSFKNGLEDGFGELVA
PNKTLNKNDLYQGYWKEGKMHGLGSYRYASGEVYDGSFQDGVRHGHGMLRSGKHNTSSPS
VFIGQWLQDKKTGYGVFDDITKGEKYMGMWQDHQRQGTGVVVTQFGLYYEGAFKDNKMMG
TGVLLSEDDTTYEGDFSDDWTLSGKGVLTMANGDYLEGSFSGEWGSGLKVTGSYFKPHLF
DFDKDKNRAVKLGRLCVSAEDKWQAVFEECWTQMGCEAPGQGENQKAWESITVALTTNRQ
HVQDSPETLSRSHSKTLESLEVVPQHDGPITVERYHTIRLYLLQACDTPLHPLGRLVETL
VAVYRMTYVGVGANRRLLQQAVKEIKSYLNRIFRIVRFLFPDLPEEGGLIPEATESTLQP
GSDAPVEPPRPGRVVSSFALLLPVLLPRLYPPLFTLYALEKEKEDDVYWECVLRLNKQPD
LALLAFLGVQQKFWPVSLPASLTVFEKKQQVIPSTKDACFASAVETLQQISTTFTPCDKL
QVIQLTFEEITQEVQSLLQQDFLWSMDDLFPVFLYVVLRARIRNLGSEVSLIEDLMDPCV
QHGEHGIMFTTLKACYYQIQHEKVT
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atggacaccctgaggaagagttctgaagaagacgacgatgctggggggcggggcctcctc
cacacctggaaaggttactcgtacagcgtcaccccagagaggctgctcctccggcggccg
gtgctccaggtggctctgggagcgcagcatggtgtgctgctggtggagggaggacaggtg
tacagttttggtgagttgccatggaaacagcgaccagcatcagaggcggtggagccgacg
ctggagagcgcgctcggtgggcagcgagtggtcaccgtggcagcagggagcttccacagc
ggcgccgtgacagaggacggcggcgtccacatgtggggggacaacggcgcggggcagtgc
ggcctgtcgggcctcagcttggtccccaacccgacgccgctggccctgctggactccagc
ggcgctcagacggtgccggttgtggagctggcctgcggggagaagcacagcctggcgctg
tcggtgcagagggaggtgtgggcgtggggcggagccacggtcccgccttggaaacctcag
agggtggaggggctggcggggcggtgcgtgctacaggtggcctgcggggcggaccacaac
ctggcactggtccgctgtctgggctctaaggaggtccagcgcccccctgtggacaaatgc
aaccagtgcaaccagctgctgttcaccatgacggacaaggaggaccacgtgatcatctct
gacagccacttctgctcgccgcggggggaggacgggctccaggcgccacctcccacccag
atcctcaaaagctctccatctgagccagttctcccctcctacgtcacctcttctccaatc
ccagcagccccttctcccaaatcacgcaccgaccccacctctgagccctccagcgctcag
acctcagagggggcggggactgttttaaccaacggagagcagccgaccccggactccaat
gggtcggttcagtctagatcgggttctgctgcccccggggttaaaagttccccttatcct
gacgagcaggcggtgaaggagtacctgaggaagctgtcggactgcacgcagaccgcgtca
aagatgccgccttcaggagctcagggttcctccaccctcaacagcctggtggcctcctgc
gcctctgcggtgagcgagcgcgtcgcctccacctacgaagccttgtccctgaggaagatg
atgaacttctacctgccgtctcgctcggaggcgctcggcggcgtgagtgacaacgccgcg
gagcgagtccgtcaggaggactctgtgcaggccaagaagagctccagcacaggggacatc
tgcgaggaggagacggagagtctgcggcgtcgcctgtcgctgcctggactcctctctcag
gtgtcgccgcggctgctaagaaaagtgggccgtcccaggatccgtgcctcagccttcacc
ccgatggaaggaggcgtccccgacgcgccggaagttctgcccaccctgcagacagaggtg
tggagctggggacaaggcgaggacggccagctggggcacggagacaattcggtcaggctg
cagccacagtgcatcaaaagcctgaacaacaaggaggtggtgcgggtggtggccggggct
catcattctgtcgctctaacggctcagtctcaggtgttctcatggggcagcaacagcgcc
ggtcagctcggacacatggaggcccccagcaccatcccccgccttgcaaagctgtcagag
ggaatccgggtttgggacgtgagcgccggagagaggcacaccctcctgctggcggacgga
gactgcatccagcccatcatttactacagcgggcagcaggtgaaggacgaggaggagaag
gcgggtcaggaggaaggaggagaggaagaggaggagaatcaagcgggggcctacacccag
caacctgtcctgctgcctttctgcatgaacctcggttttgtgaacagcgtgtttgccggc
ggtctgagttgcgtggcgctctcagaccgtaatgtgatgggcttcatcgccggcctccac
gagctggcgtccgccgagagaaagttctactgcaagctgtgcagcatcaggtcgcaggtc
ctccgccccctgctggagctggagtccctaagctcagcactaggccaggtgacctttgag
ctcctgcaaatgctggctggtcggtttagcctcttgtgtcacctgaccgggcagcacgct
gtcagcctcaccgctaatatccgccgctgccgcgatgtgaagagcctgctgatccttgac
cacactagcatcttcctcgactcctacaacgattactgcagtgctgtgggcaactttcat
gtcatgggaggcttccatgctttaacaaagccaaccctagacatgtttgggaaaagtccc
gagctgctgcagaggctgtcggagtgcagcgaggagaacccagtcgtgtcggacctcttc
gtggcgctcttctacctcccatccctccaccttcacgagtacggacggctgctgctcaaa
ctgggcacctgctttgaagtgtgttccagtgagtatcagaagctgcaggacagctgctcc
aagtttgaagcttttactgtccagctgaagagaaaaaggaaagaggctaattacaccttt
cacttctggaagagctttccgggcaaaatgacggactctctgaggaagccccaccgccga
ctcatctacgagagcagcaacaagtctctgaccctgcagaacgccggcaggttctccgtc
aactggttcatcctcttcaatgactccctggtgcacgcgcagggcgtggcgccgcataaa
aacccattttccacccatcacattttcccattggccacgctgtgggtggagccgatgcct
gaggacgacactggactacaggggttaaaggtcatcacacccgaggagacgttcacgctg
ctcgcctcgtcccccacagagaagtccaagtggcttcgtgccattaaccaggccgtggct
cacgctctgagtggggcagggaggaacgcaggtggttcaggacccaggtccgaaccgccc
atctgcaggacggcgtcctacactttttataaagacgggcgcttcaaagaggcgacgtac
gaaggtcactggctcactgggaagccccatggcagtggagagttaaaatggcctgatggc
agaatttacactggatcattcaagaacggactggaagacggctttggggagcttgtggct
cctaataagacactaaacaagaatgatctctatcagggatattggaaagagggcaagatg
cacggcctggggtcatacaggtatgccagtggtgaggtctacgacggttccttccaggac
ggcgtgcgacacggccacggcatgctgcgcagcgggaagcacaacacgtcctcccccagc
gtcttcatcggccagtggctgcaggacaagaaaacaggatatggagtctttgatgacatc
acaaaaggagaaaagtatatgggtatgtggcaggaccaccagcggcagggcaccggggtc
gtcgtcactcagtttggtctttactacgaaggagcctttaaagacaataagatgatgggg
acgggagtccttctgtcagaggacgatacgacctacgagggggatttctccgacgattgg
accctcagtggaaagggtgttctgaccatggcgaatggagactatctggagggctcgttc
agcggcgagtgggggtccggtctgaaagtgaccggttcctacttcaaaccccacctgttt
gactttgacaaggacaagaaccgggccgtgaagttgggccgtctgtgtgtgtccgcagag
gacaagtggcaggctgtgttcgaggagtgttggacccagatgggctgcgaggcgccgggc
caaggggagaaccagaaagcctgggagagcattacggtggcgctcaccaccaaccgtcag
cacgtgcaggacagtccagagacgttgtctcggagtcacagcaaaactctggagagtcta
gaggtcgtcccgcaacacgacggacccatcaccgtggagagatatcacaccatccgcctc
tacctcctccaggcgtgtgacacccccctccacccactgggccggctggtggagaccctg
gtggcggtgtacaggatgacgtacgtcggcgtcggagcgaaccgtcggctgctgcagcag
gcggtcaaggagataaagtcctacctgaaccgaatcttccggatcgtcaggtttctgttc
ccagacctgccagaagagggcggtctaatcccagaggctacggagagcacactgcagccc
ggctccgacgcccccgtggagccacccagacccggccgcgtggtgagcagcttcgccctg
ctgctccccgtcctgctgcctcgcctctacccgccgctcttcaccctctacgccctggag
aaggagaaggaggacgacgtgtactgggagtgcgtcctccgcctcaacaagcagcccgac
ctcgccctgctcgccttcctgggcgtccagcagaagttctggcccgtttcactcccagcc
tctttgactgtttttgagaaaaagcagcaggtcatcccgagcaccaaagacgcctgtttc
gcttccgcggtggaaactctgcagcagatcagcacaacgttcaccccgtgcgacaagctg
caggtgatccagctcaccttcgaggagatcacgcaggaggtgcagtcgctgctgcagcag
gacttcctgtggtccatggacgacctgtttcccgtcttcctctacgtggtgctgcgcgct
cggatcaggaacctggggtcagaggtcagcctgatagaagacctgatggatccctgcgtt
cagcacggagagcatggcatcatgttcaccaccttgaaggcctgctactaccagatccag
cacgagaaggtcacataa
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