Nematolebias whitei (Rio pearlfish): 119428785
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Entry
119428785 CDS
T08042
Symbol
runx1
Name
(RefSeq) LOW QUALITY PROTEIN: runt-related transcription factor 1
KO
K08367
runt-related transcription factor 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119428785 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119428785 (runx1)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
119428785 (runx1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
119428785
NCBI-ProteinID:
XP_037552390
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Position
23:11555605..11583622
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AA seq
510 aa
AA seq
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MVFLWDAKYDPAPGRRYTPPSTSLATGGKMAEALPLGAQEPGGGGALMGKLRIADHGMAE
VRRHTVQXQVCFEFTYVIVMLCRQVISDHPGELVKTDSPNFLCSLLPTHWRCNKTLPIAF
KVVALGDIPDGTLVTVMAGNDENYSAELRNATAAIKNQVARFNDLRFVGRSGRGKSFSLT
ITVFTNPTQVATYQRAIKITVDGPREPRRHRQKLDEVKAGSLAFSERLTELEQLRRSSIR
VTPPHHHHHHHHQPSANSRQSAVLNSASFSSPQHSQITADSRQMQSSPSWSYDQSYSYLG
QISTPSVHTSNPLSPGRSSLSDLSSRLTGPDLTAFGDPRMTLQRPFTSLSSLPDSRFPDP
RMHYPPTAAAFSYTPSHNSVSNSALGITMATAIATTPTGRYHTYLPPPYPPNNPHQAQNG
PFQSTSSPYHLYYSTTTGSYQFSMMAGGGSSSDSRSPPRILPPCTNASTGSSLLHPSLPN
QNEGVSVEVESSHSSSPTNMAATEAVWRPY
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttctttgggacgcgaaatacgacccagctcctggccggcggtacactcccccc
tccacctcactcgccacgggagggaaaatggccgaggcactgcctcttggagcgcaggag
ccgggcggagggggcgctctgatgggcaaactgcgcatcgccgaccatggcatggcagag
gtacgacgacacaccgtccaatgacaagtgtgctttgaattcacgtatgtgattgtgatg
ctgtgtcgtcaggtgatctcagatcatccaggggagttggtgaagaccgacagtccgaac
tttctctgctcgttgctccccacccactggaggtgtaacaagacgctgcccattgctttt
aaggtggtagccctcggcgacatccctgatggcaccttggttacagtgatggctggaaat
gatgagaattactcggcagagcttcggaacgccacggccgccatcaagaaccaagtggcc
agattcaacgacctgcgctttgtgggacgcagtggaagaggaaagagtttctcgctgaca
atcacagtattcaccaaccccacccaggtggctacgtatcagagggctattaaaattaca
gttgatggtcccagagagccacgacgtcatcgtcagaaactggatgaggtcaaagctggc
tctttggcgttctccgagaggctaacggagctggaacagctaagacggagctccattaga
gtgacccctcctcaccatcatcatcaccatcatcatcaaccctcagcaaacagccgccag
tctgcagttctcaactctgcctcattctccagccctcaacactctcaaataacagctgat
tccaggcagatgcagtcatctccatcttggtcatatgatcagtcctactcataccttggt
caaatatctacaccttctgttcacacatctaacccactgtcacctggtcgctcctccctc
agtgacctgtcctcgaggcttacaggtcctgaccttacagcctttggtgatcccagaatg
accttgcaacgaccttttacttccctgtcctcccttcctgactcccgtttccctgatccc
cggatgcactaccctcccacagcagccgctttctcctacacaccatcccacaactccgtc
tccaatagcgcacttggcattaccatggcaacggccattgcgaccacaccaacagggcgg
taccacacatacctgcctcctccttacccaccaaacaaccctcaccaagctcaaaatggg
cccttccagtctacttcgtcgccatatcatctgtactactccaccaccactggctcttac
cagttctccatgatggctgggggtggaagcagcagtgactcgcgctcgccaccaagaatc
ttgccgccatgcactaatgcctccacgggctcctctcttttgcacccctctctacccaat
cagaatgaaggagtgagtgtggaggtggaatccagccacagtagctcgccaacaaacatg
gctgctaccgaagctgtatggagaccttactga
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